RNA–Protein interactions for RNA: ENST00000476905.6

SSX2IP-206, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 2

Gene SSX2IP, Length 2,272 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-206ENST00000476905 RC3H1Q5TC82 1133 aaKnown RBP11.94□□□□□ -0.5
SSX2IP-206ENST00000476905 MSL1Q68DK7 614 aa11.94□□□□□ -0.5
SSX2IP-206ENST00000476905 AK7Q96M32 723 aa11.94□□□□□ -0.5
SSX2IP-206ENST00000476905 VIRMAQ69YN4 1812 aaKnown RBP11.93□□□□□ -0.5
SSX2IP-206ENST00000476905 NBR1Q14596 966 aa11.93□□□□□ -0.5
SSX2IP-206ENST00000476905 CNTNAP4Q9C0A0 1308 aa11.93□□□□□ -0.5
SSX2IP-206ENST00000476905 SIPA1L3O60292 1781 aaPredicted RBP11.93□□□□□ -0.5
SSX2IP-206ENST00000476905 SLC16A10Q8TF71 515 aa11.93□□□□□ -0.5
SSX2IP-206ENST00000476905 ARHGEF1Q92888 912 aaKnown RBP11.93□□□□□ -0.5
SSX2IP-206ENST00000476905 TRIM35Q9UPQ4 493 aa11.93□□□□□ -0.5
SSX2IP-206ENST00000476905 UBR3Q6ZT12 1888 aa11.92□□□□□ -0.5
SSX2IP-206ENST00000476905 TJP1Q07157 1748 aa11.92□□□□□ -0.5
SSX2IP-206ENST00000476905 BTBD11A6QL63 1104 aa11.92□□□□□ -0.5
SSX2IP-206ENST00000476905 RPS6KA4O75676 772 aa11.92□□□□□ -0.5
SSX2IP-206ENST00000476905 SSFA2P28290 1259 aa11.92□□□□□ -0.5
SSX2IP-206ENST00000476905 PNISRQ8TF01 805 aaKnown RBP11.92□□□□□ -0.5
SSX2IP-206ENST00000476905 ZNF831Q5JPB2 1677 aa11.92□□□□□ -0.5
SSX2IP-206ENST00000476905 QSER1Q2KHR3 1735 aa11.92□□□□□ -0.5
SSX2IP-206ENST00000476905 SENP3-EIF4A1A0A087X0R7 540 aa11.91□□□□□ -0.5
SSX2IP-206ENST00000476905 RIPK4P57078 832 aa11.91□□□□□ -0.5
SSX2IP-206ENST00000476905 RTF1Q92541 710 aaKnown RBP11.91□□□□□ -0.5
SSX2IP-206ENST00000476905 COL5A3P25940 1745 aaPredicted RBP11.91□□□□□ -0.5
SSX2IP-206ENST00000476905 TAF7Q15545 349 aaPredicted RBP11.91□□□□□ -0.5
SSX2IP-206ENST00000476905 RUNDC1Q96C34 613 aa11.91□□□□□ -0.5
SSX2IP-206ENST00000476905 ZBTB1Q9Y2K1 713 aa11.91□□□□□ -0.5
SSX2IP-206ENST00000476905 NEUROD2Q15784 382 aa11.9□□□□□ -0.5
SSX2IP-206ENST00000476905 USP16Q9Y5T5 823 aa11.9□□□□□ -0.5
SSX2IP-206ENST00000476905 HEG1Q9ULI3 1381 aa11.9□□□□□ -0.5
SSX2IP-206ENST00000476905 UBR2Q8IWV8 1755 aa11.9□□□□□ -0.5
SSX2IP-206ENST00000476905 WDR43Q15061 677 aaKnown RBP eCLIP11.9□□□□□ -0.5
SSX2IP-206ENST00000476905 DLG5Q8TDM6 1919 aa11.9□□□□□ -0.5
SSX2IP-206ENST00000476905 MAPK8IP3Q9UPT6 1336 aa11.9□□□□□ -0.5
SSX2IP-206ENST00000476905 TMEM132AQ24JP5 1023 aa11.89□□□□□ -0.51
SSX2IP-206ENST00000476905 FHDC1Q9C0D6 1143 aaPredicted RBP11.89□□□□□ -0.51
SSX2IP-206ENST00000476905 SRP68Q9UHB9 627 aaKnown RBP11.89□□□□□ -0.51
SSX2IP-206ENST00000476905 RTCBQ9Y3I0 505 aaKnown RBP11.89□□□□□ -0.51
SSX2IP-206ENST00000476905 COL24A1Q17RW2 1714 aa11.89□□□□□ -0.51
SSX2IP-206ENST00000476905 APAF1O14727 1248 aa11.89□□□□□ -0.51
SSX2IP-206ENST00000476905 ANP32CO43423 234 aa11.89□□□□□ -0.51
SSX2IP-206ENST00000476905 A1BGP04217 495 aa11.89□□□□□ -0.51
SSX2IP-206ENST00000476905 TRAPPC3LQ5T215 181 aa11.89□□□□□ -0.51
SSX2IP-206ENST00000476905 TTC5Q8N0Z6 440 aa11.89□□□□□ -0.51
SSX2IP-206ENST00000476905 FLAD1Q8NFF5 587 aa11.89□□□□□ -0.51
SSX2IP-206ENST00000476905 SPOCK2Q92563 424 aa11.89□□□□□ -0.51
SSX2IP-206ENST00000476905 CCDC87Q9NVE4 849 aa11.89□□□□□ -0.51
SSX2IP-206ENST00000476905 CICQ96RK0 1608 aaPredicted RBP11.89□□□□□ -0.51
SSX2IP-206ENST00000476905 PIP4K2AP48426 406 aaPredicted RBP11.88□□□□□ -0.51
SSX2IP-206ENST00000476905 SYT17Q9BSW7 474 aa11.88□□□□□ -0.51
SSX2IP-206ENST00000476905 PNNQ9H307 717 aaKnown RBP11.88□□□□□ -0.51
SSX2IP-206ENST00000476905 SOS1Q07889 1333 aaPredicted RBP11.88□□□□□ -0.51
SSX2IP-206ENST00000476905 GYS1P13807 737 aa11.88□□□□□ -0.51
SSX2IP-206ENST00000476905 KLHL34Q8N239 644 aa11.88□□□□□ -0.51
SSX2IP-206ENST00000476905 FMNL2Q96PY5 1086 aa11.88□□□□□ -0.51
SSX2IP-206ENST00000476905 EIF4A1P60842 406 aaKnown RBP11.87□□□□□ -0.51
SSX2IP-206ENST00000476905 BCL2L12Q9HB09 334 aa11.87□□□□□ -0.51
SSX2IP-206ENST00000476905 MRS2Q9HD23 443 aa11.87□□□□□ -0.51
SSX2IP-206ENST00000476905 NBPF26B4DH59 902 aa11.86□□□□□ -0.51
SSX2IP-206ENST00000476905 NEFMP07197 916 aa11.86□□□□□ -0.51
SSX2IP-206ENST00000476905 EIF5P55010 431 aaKnown RBP11.86□□□□□ -0.51
SSX2IP-206ENST00000476905 NBPF10Q6P3W6 841 aaKnown RBP11.86□□□□□ -0.51
SSX2IP-206ENST00000476905 NBPF15Q8N660 670 aa11.86□□□□□ -0.51
SSX2IP-206ENST00000476905 PPP1R1BQ9UD71 204 aaPredicted RBP11.86□□□□□ -0.51
SSX2IP-206ENST00000476905 CANXP27824 592 aaKnown RBP11.86□□□□□ -0.51
SSX2IP-206ENST00000476905 NLGN2Q8NFZ4 835 aa11.86□□□□□ -0.51
SSX2IP-206ENST00000476905 KRT24Q2M2I5 525 aa11.85□□□□□ -0.51
SSX2IP-206ENST00000476905 USP42Q9H9J4 1324 aaKnown RBP11.85□□□□□ -0.51
SSX2IP-206ENST00000476905 GIGYF1O75420 1035 aaPredicted RBP11.85□□□□□ -0.51
SSX2IP-206ENST00000476905 HMGB2P26583 209 aaKnown RBP11.85□□□□□ -0.51
SSX2IP-206ENST00000476905 CHL1O00533 1208 aa11.84□□□□□ -0.51
SSX2IP-206ENST00000476905 STARD3NLO95772 234 aa11.84□□□□□ -0.51
SSX2IP-206ENST00000476905 SNRPA1P09661 255 aaKnown RBP11.84□□□□□ -0.51
SSX2IP-206ENST00000476905 RFC4P35249 363 aa11.84□□□□□ -0.51
SSX2IP-206ENST00000476905 MMP10P09238 476 aa11.84□□□□□ -0.51
SSX2IP-206ENST00000476905 DDR1Q08345 913 aa11.84□□□□□ -0.51
SSX2IP-206ENST00000476905 USPL1Q5W0Q7 1092 aa11.84□□□□□ -0.51
SSX2IP-206ENST00000476905 POLD1P28340 1107 aa11.83□□□□□ -0.52
SSX2IP-206ENST00000476905 ZNF853P0CG23 659 aa11.83□□□□□ -0.52
SSX2IP-206ENST00000476905 TM4SF1P30408 202 aa11.83□□□□□ -0.52
SSX2IP-206ENST00000476905 TEX13AQ9BXU3 409 aaPredicted RBP11.83□□□□□ -0.52
SSX2IP-206ENST00000476905 COL15A1P39059 1388 aa11.82□□□□□ -0.52
SSX2IP-206ENST00000476905 C4AP0C0L4 1744 aa11.82□□□□□ -0.52
SSX2IP-206ENST00000476905 NLGN1Q8N2Q7 840 aa11.82□□□□□ -0.52
SSX2IP-206ENST00000476905 NARFQ9UHQ1 456 aa11.82□□□□□ -0.52
SSX2IP-206ENST00000476905 TSPYL4Q9UJ04 414 aa11.82□□□□□ -0.52
SSX2IP-206ENST00000476905 TBC1D2BQ9UPU7 963 aa11.82□□□□□ -0.52
SSX2IP-206ENST00000476905 KDM3BQ7LBC6 1761 aa11.82□□□□□ -0.52
SSX2IP-206ENST00000476905 IL6STP40189 918 aaPredicted RBP11.81□□□□□ -0.52
SSX2IP-206ENST00000476905 LRP10Q7Z4F1 713 aa11.81□□□□□ -0.52
SSX2IP-206ENST00000476905 CAMTA2O94983 1202 aa11.8□□□□□ -0.52
SSX2IP-206ENST00000476905 LMOD3Q0VAK6 560 aa11.8□□□□□ -0.52
SSX2IP-206ENST00000476905 NFIXQ14938 502 aa11.8□□□□□ -0.52
SSX2IP-206ENST00000476905 PDIA6Q15084 440 aa11.8□□□□□ -0.52
SSX2IP-206ENST00000476905 POLRMTO00411 1230 aaKnown RBP11.79□□□□□ -0.52
SSX2IP-206ENST00000476905 PROSER3Q2NL68 480 aa11.79□□□□□ -0.52
SSX2IP-206ENST00000476905 FAM9BQ8IZU0 186 aa11.79□□□□□ -0.52
SSX2IP-206ENST00000476905 MBIPQ9NS73 344 aa11.79□□□□□ -0.52
SSX2IP-206ENST00000476905 BABAM1Q9NWV8 329 aa11.79□□□□□ -0.52
SSX2IP-206ENST00000476905 ZNF330Q9Y3S2 320 aaPredicted RBP11.79□□□□□ -0.52
SSX2IP-206ENST00000476905 LAS1LQ9Y4W2 734 aaKnown RBP11.79□□□□□ -0.52
SSX2IP-206ENST00000476905 ANXA1P04083 346 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms