RNA–Protein interactions for RNA: ENST00000476784.5

TTC3-215, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2

Gene TTC3, Length 7,425 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-215ENST00000476784 RAB3GAP2Q9H2M9 1393 aa7.78□□□□□ -1.16
TTC3-215ENST00000476784 KANK4Q5T7N3 995 aaPredicted RBP7.78□□□□□ -1.16
TTC3-215ENST00000476784 ZRANB1Q9UGI0 708 aa7.78□□□□□ -1.16
TTC3-215ENST00000476784 CTNNA3Q9UI47 895 aa7.78□□□□□ -1.16
TTC3-215ENST00000476784 MSH6P52701 1360 aa7.78□□□□□ -1.16
TTC3-215ENST00000476784 TSPY2A6NKD2 308 aa7.78□□□□□ -1.16
TTC3-215ENST00000476784 DDB1Q16531 1140 aa7.78□□□□□ -1.16
TTC3-215ENST00000476784 PHLDB1Q86UU1 1377 aa7.78□□□□□ -1.16
TTC3-215ENST00000476784 MYBBP1AQ9BQG0 1328 aaKnown RBP7.78□□□□□ -1.16
TTC3-215ENST00000476784 TWISTNBQ3B726 338 aaPredicted RBP7.78□□□□□ -1.16
TTC3-215ENST00000476784 CACNA2D4Q7Z3S7 1137 aa7.78□□□□□ -1.16
TTC3-215ENST00000476784 PPM1EQ8WY54 764 aa7.78□□□□□ -1.16
TTC3-215ENST00000476784 ZNF692Q9BU19 519 aaPredicted RBP7.78□□□□□ -1.16
TTC3-215ENST00000476784 INCENPQ9NQS7 918 aa7.78□□□□□ -1.16
TTC3-215ENST00000476784 LRPPRCP42704 1394 aaKnown RBP7.78□□□□□ -1.16
TTC3-215ENST00000476784 RAB34Q9BZG1 259 aa7.78□□□□□ -1.16
TTC3-215ENST00000476784 RTCBQ9Y3I0 505 aaKnown RBP7.78□□□□□ -1.16
TTC3-215ENST00000476784 RTEL1-TNFRSF6BF6WH68 1400 aa7.77□□□□□ -1.17
TTC3-215ENST00000476784 ARHGAP5Q13017 1502 aa7.77□□□□□ -1.17
TTC3-215ENST00000476784 SRGAP3O43295 1099 aa7.77□□□□□ -1.17
TTC3-215ENST00000476784 ANO3Q9BYT9 981 aa7.77□□□□□ -1.17
TTC3-215ENST00000476784 GABPAQ06546 454 aa7.77□□□□□ -1.17
TTC3-215ENST00000476784 CCDC178Q5BJE1 867 aa7.77□□□□□ -1.17
TTC3-215ENST00000476784 RNF34Q969K3 372 aa7.77□□□□□ -1.17
TTC3-215ENST00000476784 CETN1Q12798 172 aa7.77□□□□□ -1.17
TTC3-215ENST00000476784 DYDC1Q8WWB3 177 aa7.77□□□□□ -1.17
TTC3-215ENST00000476784 IRAK4Q9NWZ3 460 aa7.77□□□□□ -1.17
TTC3-215ENST00000476784 IQSEC3Q9UPP2 1182 aaPredicted RBP7.77□□□□□ -1.17
TTC3-215ENST00000476784 TTC21AQ8NDW8 1320 aa7.77□□□□□ -1.17
TTC3-215ENST00000476784 STX6O43752 255 aa7.77□□□□□ -1.17
TTC3-215ENST00000476784 SPC25Q9HBM1 224 aa7.77□□□□□ -1.17
TTC3-215ENST00000476784 CCDC39Q9UFE4 941 aa7.77□□□□□ -1.17
TTC3-215ENST00000476784 ODF2LQ9ULJ1 636 aa7.77□□□□□ -1.17
TTC3-215ENST00000476784 ARHGEF6Q15052 776 aa7.77□□□□□ -1.17
TTC3-215ENST00000476784 ZNF397Q8NF99 534 aaPredicted RBP7.77□□□□□ -1.17
TTC3-215ENST00000476784 BACH1O14867 736 aa7.76□□□□□ -1.17
TTC3-215ENST00000476784 CENPQQ7L2Z9 268 aaPredicted RBP7.76□□□□□ -1.17
TTC3-215ENST00000476784 WASF1Q92558 559 aa7.76□□□□□ -1.17
TTC3-215ENST00000476784 FIBPO43427 364 aa7.76□□□□□ -1.17
TTC3-215ENST00000476784 RNF169Q8NCN4 708 aa7.76□□□□□ -1.17
TTC3-215ENST00000476784 TRIM6Q9C030 488 aaPredicted RBP7.76□□□□□ -1.17
TTC3-215ENST00000476784 CYP46A1Q9Y6A2 500 aa7.76□□□□□ -1.17
TTC3-215ENST00000476784 M0QZ92 97 aa7.76□□□□□ -1.17
TTC3-215ENST00000476784 APBB1IPQ7Z5R6 666 aaPredicted RBP7.76□□□□□ -1.17
TTC3-215ENST00000476784 KAT14Q9H8E8 782 aa7.76□□□□□ -1.17
TTC3-215ENST00000476784 CCDC194A0A1B0GVG4 234 aa7.76□□□□□ -1.17
TTC3-215ENST00000476784 ACTN2P35609 894 aa7.76□□□□□ -1.17
TTC3-215ENST00000476784 SNX16P57768 344 aa7.76□□□□□ -1.17
TTC3-215ENST00000476784 CWC27Q6UX04 472 aaKnown RBP7.76□□□□□ -1.17
TTC3-215ENST00000476784 ATP2C2O75185 946 aa7.76□□□□□ -1.17
TTC3-215ENST00000476784 KLHL10Q6JEL2 608 aa7.76□□□□□ -1.17
TTC3-215ENST00000476784 STX8Q9UNK0 236 aa7.76□□□□□ -1.17
TTC3-215ENST00000476784 KIF4AO95239 1232 aa7.75□□□□□ -1.17
TTC3-215ENST00000476784 XRCC6P12956 609 aaKnown RBP eCLIP7.75□□□□□ -1.17
TTC3-215ENST00000476784 CCDC144CPQ8IYA2 1237 aa7.75□□□□□ -1.17
TTC3-215ENST00000476784 NSFL1CQ9UNZ2 370 aaKnown RBP7.75□□□□□ -1.17
TTC3-215ENST00000476784 ABL1P00519 1130 aa7.75□□□□□ -1.17
TTC3-215ENST00000476784 CALM1P0DP23 149 aa7.75□□□□□ -1.17
TTC3-215ENST00000476784 CALM2P0DP24 149 aa7.75□□□□□ -1.17
TTC3-215ENST00000476784 CALM3P0DP25 149 aa7.75□□□□□ -1.17
TTC3-215ENST00000476784 SKOR2Q2VWA4 1001 aaPredicted RBP7.75□□□□□ -1.17
TTC3-215ENST00000476784 MSL1Q68DK7 614 aa7.75□□□□□ -1.17
TTC3-215ENST00000476784 PKD2L1Q9P0L9 805 aa7.75□□□□□ -1.17
TTC3-215ENST00000476784 GNAT3A8MTJ3 354 aa7.75□□□□□ -1.17
TTC3-215ENST00000476784 NEK4P51957 841 aa7.75□□□□□ -1.17
TTC3-215ENST00000476784 CFAP70Q5T0N1 1121 aa7.75□□□□□ -1.17
TTC3-215ENST00000476784 RNF214Q8ND24 703 aa7.75□□□□□ -1.17
TTC3-215ENST00000476784 DDX11Q96FC9 970 aa7.75□□□□□ -1.17
TTC3-215ENST00000476784 HINFPQ9BQA5 517 aa7.75□□□□□ -1.17
TTC3-215ENST00000476784 CEP131Q9UPN4 1083 aa7.75□□□□□ -1.17
TTC3-215ENST00000476784 BCAR3O75815 825 aa7.75□□□□□ -1.17
TTC3-215ENST00000476784 HARSP12081 509 aaKnown RBP7.75□□□□□ -1.17
TTC3-215ENST00000476784 GSTO1P78417 241 aa7.75□□□□□ -1.17
TTC3-215ENST00000476784 CCDC89Q8N998 374 aa7.75□□□□□ -1.17
TTC3-215ENST00000476784 IL1RAPL2Q9NP60 686 aa7.75□□□□□ -1.17
TTC3-215ENST00000476784 JAG2Q9Y219 1238 aa7.75□□□□□ -1.17
TTC3-215ENST00000476784 GJC1P36383 396 aa7.75□□□□□ -1.17
TTC3-215ENST00000476784 CFAP58Q5T655 872 aa7.75□□□□□ -1.17
TTC3-215ENST00000476784 LARGE2Q8N3Y3 721 aa7.75□□□□□ -1.17
TTC3-215ENST00000476784 NLRP3Q96P20 1036 aa7.75□□□□□ -1.17
TTC3-215ENST00000476784 IDEP14735 1019 aa7.74□□□□□ -1.17
TTC3-215ENST00000476784 ZYXQ15942 572 aaKnown RBP7.74□□□□□ -1.17
TTC3-215ENST00000476784 STXBP4Q6ZWJ1 553 aa7.74□□□□□ -1.17
TTC3-215ENST00000476784 CATIPQ7Z7H3 387 aa7.74□□□□□ -1.17
TTC3-215ENST00000476784 LRRCC1Q9C099 1032 aa7.74□□□□□ -1.17
TTC3-215ENST00000476784 TMCO5BA8MYB1 307 aa7.74□□□□□ -1.17
TTC3-215ENST00000476784 TSPY3P0CV98 308 aa7.74□□□□□ -1.17
TTC3-215ENST00000476784 TSPY8P0CW00 308 aa7.74□□□□□ -1.17
TTC3-215ENST00000476784 DEKP35659 375 aaKnown RBP7.74□□□□□ -1.17
TTC3-215ENST00000476784 TERF1P54274 439 aa7.74□□□□□ -1.17
TTC3-215ENST00000476784 PRPF4BQ13523 1007 aaKnown RBP7.74□□□□□ -1.17
TTC3-215ENST00000476784 VPS36Q86VN1 386 aa7.74□□□□□ -1.17
TTC3-215ENST00000476784 SPC24Q8NBT2 197 aa7.74□□□□□ -1.17
TTC3-215ENST00000476784 GOLGA6L7A0A1B0GV03 622 aa7.74□□□□□ -1.17
TTC3-215ENST00000476784 KIF5BP33176 963 aa7.74□□□□□ -1.17
TTC3-215ENST00000476784 PPP4R4Q6NUP7 873 aa7.74□□□□□ -1.17
TTC3-215ENST00000476784 SMARCC2Q8TAQ2 1214 aa7.74□□□□□ -1.17
TTC3-215ENST00000476784 BCCIPQ9P287 314 aaKnown RBP eCLIP7.74□□□□□ -1.17
TTC3-215ENST00000476784 CDC45O75419 566 aa7.74□□□□□ -1.17
TTC3-215ENST00000476784 MAP2K1Q02750 393 aaPredicted RBP7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms