RNA–Protein interactions for RNA: ENST00000476658.5

DFFA-203, Transcript of DNA fragmentation factor subunit alpha, humanhuman

TSL 3

Gene DFFA, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFA-203ENST00000476658 TEX13AQ9BXU3 409 aaPredicted RBP19.74■□□□□ 0.75
DFFA-203ENST00000476658 ADRA2BP18089 450 aa19.73■□□□□ 0.75
DFFA-203ENST00000476658 SGIP1Q9BQI5 828 aa19.73■□□□□ 0.75
DFFA-203ENST00000476658 RFC4P35249 363 aa19.72■□□□□ 0.75
DFFA-203ENST00000476658 ARHGEF1Q92888 912 aaKnown RBP19.72■□□□□ 0.75
DFFA-203ENST00000476658 TRIM35Q9UPQ4 493 aa19.72■□□□□ 0.75
DFFA-203ENST00000476658 ZBTB1Q9Y2K1 713 aa19.72■□□□□ 0.75
DFFA-203ENST00000476658 ARXQ96QS3 562 aa19.71■□□□□ 0.75
DFFA-203ENST00000476658 TSPYL4Q9UJ04 414 aa19.71■□□□□ 0.75
DFFA-203ENST00000476658 SNRPA1P09661 255 aaKnown RBP19.7■□□□□ 0.74
DFFA-203ENST00000476658 CANXP27824 592 aaKnown RBP19.7■□□□□ 0.74
DFFA-203ENST00000476658 PRAMEF22A3QJZ6 481 aa19.69■□□□□ 0.74
DFFA-203ENST00000476658 LAMB4A4D0S4 1761 aa19.69■□□□□ 0.74
DFFA-203ENST00000476658 SOS1Q07889 1333 aaPredicted RBP19.69■□□□□ 0.74
DFFA-203ENST00000476658 SENP3-EIF4A1A0A087X0R7 540 aa19.68■□□□□ 0.74
DFFA-203ENST00000476658 FAM9BQ8IZU0 186 aa19.68■□□□□ 0.74
DFFA-203ENST00000476658 LAS1LQ9Y4W2 734 aaKnown RBP19.68■□□□□ 0.74
DFFA-203ENST00000476658 USP16Q9Y5T5 823 aa19.68■□□□□ 0.74
DFFA-203ENST00000476658 COL15A1P39059 1388 aa19.68■□□□□ 0.74
DFFA-203ENST00000476658 EIF4A1P60842 406 aaKnown RBP19.67■□□□□ 0.74
DFFA-203ENST00000476658 KLHL34Q8N239 644 aa19.67■□□□□ 0.74
DFFA-203ENST00000476658 ZNF330Q9Y3S2 320 aaPredicted RBP19.67■□□□□ 0.74
DFFA-203ENST00000476658 A1BGP04217 495 aa19.66■□□□□ 0.74
DFFA-203ENST00000476658 FHDC1Q9C0D6 1143 aaPredicted RBP19.66■□□□□ 0.74
DFFA-203ENST00000476658 BABAM1Q9NWV8 329 aa19.66■□□□□ 0.74
DFFA-203ENST00000476658 SRP68Q9UHB9 627 aaKnown RBP19.66■□□□□ 0.74
DFFA-203ENST00000476658 ZPR1O75312 459 aa19.65■□□□□ 0.74
DFFA-203ENST00000476658 NPM2Q86SE8 214 aaKnown RBP19.65■□□□□ 0.74
DFFA-203ENST00000476658 USP42Q9H9J4 1324 aaKnown RBP19.65■□□□□ 0.74
DFFA-203ENST00000476658 GIGYF1O75420 1035 aaPredicted RBP19.64■□□□□ 0.73
DFFA-203ENST00000476658 GYS1P13807 737 aa19.64■□□□□ 0.73
DFFA-203ENST00000476658 NLGN1Q8N2Q7 840 aa19.64■□□□□ 0.73
DFFA-203ENST00000476658 IL6STP40189 918 aaPredicted RBP19.63■□□□□ 0.73
DFFA-203ENST00000476658 PIP4K2AP48426 406 aaPredicted RBP19.63■□□□□ 0.73
DFFA-203ENST00000476658 EIF5P55010 431 aaKnown RBP19.63■□□□□ 0.73
DFFA-203ENST00000476658 CALD1Q05682 793 aaKnown RBP19.63■□□□□ 0.73
DFFA-203ENST00000476658 A0A087WZG4 1122 aa19.62■□□□□ 0.73
DFFA-203ENST00000476658 CHL1O00533 1208 aa19.62■□□□□ 0.73
DFFA-203ENST00000476658 MMP10P09238 476 aa19.62■□□□□ 0.73
DFFA-203ENST00000476658 USPL1Q5W0Q7 1092 aa19.62■□□□□ 0.73
DFFA-203ENST00000476658 DIEXFQ68CQ4 756 aaKnown RBP19.62■□□□□ 0.73
DFFA-203ENST00000476658 NARFQ9UHQ1 456 aa19.62■□□□□ 0.73
DFFA-203ENST00000476658 CFAP44Q96MT7 982 aa19.61■□□□□ 0.73
DFFA-203ENST00000476658 SYT17Q9BSW7 474 aa19.61■□□□□ 0.73
DFFA-203ENST00000476658 FKBP8Q14318 412 aa19.6■□□□□ 0.73
DFFA-203ENST00000476658 TBC1D2BQ9UPU7 963 aa19.59■□□□□ 0.73
DFFA-203ENST00000476658 SALL2Q9Y467 1007 aaPredicted RBP19.59■□□□□ 0.73
DFFA-203ENST00000476658 SCN7AQ01118 1682 aa19.59■□□□□ 0.73
DFFA-203ENST00000476658 NBPF26B4DH59 902 aa19.58■□□□□ 0.72
DFFA-203ENST00000476658 GNAI1P63096 354 aa19.58■□□□□ 0.72
DFFA-203ENST00000476658 CCDC27Q2M243 656 aa19.58■□□□□ 0.72
DFFA-203ENST00000476658 NBPF10Q6P3W6 841 aaKnown RBP19.58■□□□□ 0.72
DFFA-203ENST00000476658 NBPF15Q8N660 670 aa19.58■□□□□ 0.72
DFFA-203ENST00000476658 IFT57Q9NWB7 429 aa19.58■□□□□ 0.72
DFFA-203ENST00000476658 PARP3Q9Y6F1 533 aa19.58■□□□□ 0.72
DFFA-203ENST00000476658 CCER2I3L3R5 266 aa19.57■□□□□ 0.72
DFFA-203ENST00000476658 EIF2S2P20042 333 aaKnown RBP19.57■□□□□ 0.72
DFFA-203ENST00000476658 WWC1Q8IX03 1113 aa19.57■□□□□ 0.72
DFFA-203ENST00000476658 MBIPQ9NS73 344 aa19.57■□□□□ 0.72
DFFA-203ENST00000476658 BCORQ6W2J9 1755 aa19.57■□□□□ 0.72
DFFA-203ENST00000476658 ZNF853P0CG23 659 aa19.56■□□□□ 0.72
DFFA-203ENST00000476658 KRT24Q2M2I5 525 aa19.56■□□□□ 0.72
DFFA-203ENST00000476658 DZIP3Q86Y13 1208 aaKnown RBP19.56■□□□□ 0.72
DFFA-203ENST00000476658 NGEFQ8N5V2 710 aa19.55■□□□□ 0.72
DFFA-203ENST00000476658 BCL2L12Q9HB09 334 aa19.55■□□□□ 0.72
DFFA-203ENST00000476658 AFDNP55196 1824 aaKnown RBP19.54■□□□□ 0.72
DFFA-203ENST00000476658 DCAF8L1A6NGE4 600 aa19.54■□□□□ 0.72
DFFA-203ENST00000476658 MYL6BP14649 208 aa19.54■□□□□ 0.72
DFFA-203ENST00000476658 NCBP3Q53F19 620 aaKnown RBP19.54■□□□□ 0.72
DFFA-203ENST00000476658 NLGN2Q8NFZ4 835 aa19.54■□□□□ 0.72
DFFA-203ENST00000476658 NECTIN2Q92692 538 aa19.54■□□□□ 0.72
DFFA-203ENST00000476658 CD2APQ9Y5K6 639 aa19.54■□□□□ 0.72
DFFA-203ENST00000476658 CAMTA2O94983 1202 aa19.53■□□□□ 0.72
DFFA-203ENST00000476658 DDR1Q08345 913 aa19.53■□□□□ 0.72
DFFA-203ENST00000476658 NFIXQ14938 502 aa19.53■□□□□ 0.72
DFFA-203ENST00000476658 BICDL1Q6ZP65 573 aa19.53■□□□□ 0.72
DFFA-203ENST00000476658 KIF13BQ9NQT8 1826 aa19.53■□□□□ 0.72
DFFA-203ENST00000476658 ERBB4Q15303 1308 aa19.52■□□□□ 0.72
DFFA-203ENST00000476658 TM4SF1P30408 202 aa19.52■□□□□ 0.72
DFFA-203ENST00000476658 POLRMTO00411 1230 aaKnown RBP19.51■□□□□ 0.71
DFFA-203ENST00000476658 DUSP27Q5VZP5 1158 aa19.51■□□□□ 0.71
DFFA-203ENST00000476658 MIER1Q8N108 512 aa19.51■□□□□ 0.71
DFFA-203ENST00000476658 HOXB7P09629 217 aa19.5■□□□□ 0.71
DFFA-203ENST00000476658 HDGFL1Q5TGJ6 251 aa19.5■□□□□ 0.71
DFFA-203ENST00000476658 TBC1D9BQ66K14 1250 aa19.5■□□□□ 0.71
DFFA-203ENST00000476658 TSR2Q969E8 191 aaKnown RBP19.5■□□□□ 0.71
DFFA-203ENST00000476658 ZNF652Q9Y2D9 606 aa19.5■□□□□ 0.71
DFFA-203ENST00000476658 NUP98P52948 1817 aa19.5■□□□□ 0.71
DFFA-203ENST00000476658 IL16Q14005 1332 aa19.5■□□□□ 0.71
DFFA-203ENST00000476658 ELL2O00472 640 aaPredicted RBP19.49■□□□□ 0.71
DFFA-203ENST00000476658 ANXA1P04083 346 aa19.49■□□□□ 0.71
DFFA-203ENST00000476658 KIF6Q6ZMV9 814 aa19.49■□□□□ 0.71
DFFA-203ENST00000476658 PELP1Q8IZL8 1130 aaKnown RBP19.49■□□□□ 0.71
DFFA-203ENST00000476658 N4BP2Q86UW6 1770 aaPredicted RBP19.49■□□□□ 0.71
DFFA-203ENST00000476658 C10orf71Q711Q0 1435 aa19.49■□□□□ 0.71
DFFA-203ENST00000476658 SERPINB2P05120 415 aa19.48■□□□□ 0.71
DFFA-203ENST00000476658 PROSER3Q2NL68 480 aa19.48■□□□□ 0.71
DFFA-203ENST00000476658 WDR63Q8IWG1 891 aa19.48■□□□□ 0.71
DFFA-203ENST00000476658 NRXN2Q9P2S2 1712 aa19.48■□□□□ 0.71
DFFA-203ENST00000476658 PDIA6Q15084 440 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms