RNA–Protein interactions for RNA: ENST00000475819.1

LMNB2-202, Transcript of lamin B2, humanhuman

TSL 5

Gene LMNB2, Length 885 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB2-202ENST00000475819 APLP1P51693 650 aa22.26■■□□□ 1.15
LMNB2-202ENST00000475819 DALRD3Q5D0E6 543 aaKnown RBP22.26■■□□□ 1.15
LMNB2-202ENST00000475819 AKAP4Q5JQC9 854 aa22.26■■□□□ 1.15
LMNB2-202ENST00000475819 C9orf131Q5VYM1 1079 aa22.26■■□□□ 1.15
LMNB2-202ENST00000475819 NMRK2Q9NPI5 230 aa22.26■■□□□ 1.15
LMNB2-202ENST00000475819 IL13P35225 146 aa22.25■■□□□ 1.15
LMNB2-202ENST00000475819 DDR1Q08345 913 aa22.25■■□□□ 1.15
LMNB2-202ENST00000475819 MRC1P22897 1456 aa22.24■■□□□ 1.15
LMNB2-202ENST00000475819 U2SURPO15042 1029 aaKnown RBP22.24■■□□□ 1.15
LMNB2-202ENST00000475819 HMOX1P09601 288 aa22.24■■□□□ 1.15
LMNB2-202ENST00000475819 DNAJC10Q8IXB1 793 aa22.24■■□□□ 1.15
LMNB2-202ENST00000475819 SLC52A2Q9HAB3 445 aa22.24■■□□□ 1.15
LMNB2-202ENST00000475819 RNF181Q9P0P0 153 aa22.24■■□□□ 1.15
LMNB2-202ENST00000475819 ADAMTS8Q9UP79 889 aa22.24■■□□□ 1.15
LMNB2-202ENST00000475819 U2AF1L5P0DN76 240 aaPredicted RBP22.23■■□□□ 1.15
LMNB2-202ENST00000475819 CHRNA5P30532 468 aa22.23■■□□□ 1.15
LMNB2-202ENST00000475819 U2AF1Q01081 240 aaKnown RBP eCLIP22.23■■□□□ 1.15
LMNB2-202ENST00000475819 USPL1Q5W0Q7 1092 aa22.23■■□□□ 1.15
LMNB2-202ENST00000475819 PNNQ9H307 717 aaKnown RBP22.23■■□□□ 1.15
LMNB2-202ENST00000475819 KCPQ6ZWJ8 1503 aa22.22■■□□□ 1.15
LMNB2-202ENST00000475819 ADAMTS7Q9UKP4 1686 aa22.22■■□□□ 1.15
LMNB2-202ENST00000475819 COL15A1P39059 1388 aa22.22■■□□□ 1.15
LMNB2-202ENST00000475819 TNRC6CQ9HCJ0 1690 aaKnown RBP22.21■■□□□ 1.15
LMNB2-202ENST00000475819 WDR90Q96KV7 1748 aa22.21■■□□□ 1.15
LMNB2-202ENST00000475819 KCNA3P22001 575 aa22.21■■□□□ 1.15
LMNB2-202ENST00000475819 SLC39A6Q13433 755 aa22.21■■□□□ 1.15
LMNB2-202ENST00000475819 INTS5Q6P9B9 1019 aaKnown RBP22.21■■□□□ 1.15
LMNB2-202ENST00000475819 YTHDC1Q96MU7 727 aaKnown RBP22.21■■□□□ 1.15
LMNB2-202ENST00000475819 KDM2BQ8NHM5 1336 aa22.21■■□□□ 1.15
LMNB2-202ENST00000475819 POLRMTO00411 1230 aaKnown RBP22.2■■□□□ 1.14
LMNB2-202ENST00000475819 SOS1Q07889 1333 aaPredicted RBP22.2■■□□□ 1.14
LMNB2-202ENST00000475819 AFDNP55196 1824 aaKnown RBP22.2■■□□□ 1.14
LMNB2-202ENST00000475819 LGR6Q9HBX8 967 aa22.19■■□□□ 1.14
LMNB2-202ENST00000475819 RNMTO43148 476 aaKnown RBP22.18■■□□□ 1.14
LMNB2-202ENST00000475819 DLG5Q8TDM6 1919 aa22.18■■□□□ 1.14
LMNB2-202ENST00000475819 HNRNPUQ00839 825 aaKnown RBP eCLIP22.17■■□□□ 1.14
LMNB2-202ENST00000475819 TTC5Q8N0Z6 440 aa22.17■■□□□ 1.14
LMNB2-202ENST00000475819 ZBTB1Q9Y2K1 713 aa22.17■■□□□ 1.14
LMNB2-202ENST00000475819 NEFMP07197 916 aa22.16■■□□□ 1.14
LMNB2-202ENST00000475819 CYP19A1P11511 503 aaPredicted RBP22.16■■□□□ 1.14
LMNB2-202ENST00000475819 RBM46Q8TBY0 533 aaKnown RBP22.16■■□□□ 1.14
LMNB2-202ENST00000475819 RUNDC1Q96C34 613 aa22.16■■□□□ 1.14
LMNB2-202ENST00000475819 UBR2Q8IWV8 1755 aa22.16■■□□□ 1.14
LMNB2-202ENST00000475819 DLEC1Q9Y238 1755 aa22.16■■□□□ 1.14
LMNB2-202ENST00000475819 SBF1O95248 1867 aa22.15■■□□□ 1.14
LMNB2-202ENST00000475819 TIAM2Q8IVF5 1701 aa22.14■■□□□ 1.14
LMNB2-202ENST00000475819 MAPK8IP3Q9UPT6 1336 aa22.14■■□□□ 1.14
LMNB2-202ENST00000475819 RASSF7Q02833 373 aa22.14■■□□□ 1.13
LMNB2-202ENST00000475819 NFIXQ14938 502 aa22.14■■□□□ 1.13
LMNB2-202ENST00000475819 MTHFSDQ2M296 383 aaKnown RBP22.14■■□□□ 1.13
LMNB2-202ENST00000475819 NARFQ9UHQ1 456 aa22.14■■□□□ 1.13
LMNB2-202ENST00000475819 ZNF330Q9Y3S2 320 aaPredicted RBP22.14■■□□□ 1.13
LMNB2-202ENST00000475819 CANXP27824 592 aaKnown RBP22.13■■□□□ 1.13
LMNB2-202ENST00000475819 TM4SF1P30408 202 aa22.13■■□□□ 1.13
LMNB2-202ENST00000475819 RSPH6AQ9H0K4 717 aa22.13■■□□□ 1.13
LMNB2-202ENST00000475819 NRXN2Q9P2S2 1712 aa22.13■■□□□ 1.13
LMNB2-202ENST00000475819 BICDL1Q6ZP65 573 aa22.12■■□□□ 1.13
LMNB2-202ENST00000475819 NGEFQ8N5V2 710 aa22.12■■□□□ 1.13
LMNB2-202ENST00000475819 SCN7AQ01118 1682 aa22.11■■□□□ 1.13
LMNB2-202ENST00000475819 SERPINB2P05120 415 aa22.11■■□□□ 1.13
LMNB2-202ENST00000475819 CCDC146Q8IYE0 955 aa22.11■■□□□ 1.13
LMNB2-202ENST00000475819 RRAGCQ9HB90 399 aa22.11■■□□□ 1.13
LMNB2-202ENST00000475819 ZBED9Q6R2W3 1325 aa22.1■■□□□ 1.13
LMNB2-202ENST00000475819 STARD3NLO95772 234 aa22.1■■□□□ 1.13
LMNB2-202ENST00000475819 TEFQ10587 303 aa22.1■■□□□ 1.13
LMNB2-202ENST00000475819 FSTL1Q12841 308 aa22.1■■□□□ 1.13
LMNB2-202ENST00000475819 PRKAR2BP31323 418 aa22.09■■□□□ 1.13
LMNB2-202ENST00000475819 HTRA3P83110 453 aa22.09■■□□□ 1.13
LMNB2-202ENST00000475819 NPM2Q86SE8 214 aaKnown RBP22.09■■□□□ 1.13
LMNB2-202ENST00000475819 C2CD5Q86YS7 1000 aa22.09■■□□□ 1.13
LMNB2-202ENST00000475819 VSIG10Q8N0Z9 540 aa22.09■■□□□ 1.13
LMNB2-202ENST00000475819 PLEKHF1Q96S99 279 aa22.09■■□□□ 1.13
LMNB2-202ENST00000475819 CARMIL3Q8ND23 1372 aa22.09■■□□□ 1.13
LMNB2-202ENST00000475819 NPHP1O15259 732 aa22.08■■□□□ 1.13
LMNB2-202ENST00000475819 H0YIN7 160 aa22.07■■□□□ 1.12
LMNB2-202ENST00000475819 LMNB1P20700 586 aa22.07■■□□□ 1.12
LMNB2-202ENST00000475819 NCBP3Q53F19 620 aaKnown RBP22.07■■□□□ 1.12
LMNB2-202ENST00000475819 TTLL6Q8N841 843 aa22.07■■□□□ 1.12
LMNB2-202ENST00000475819 CCDC88AQ3V6T2 1871 aa22.07■■□□□ 1.12
LMNB2-202ENST00000475819 ZC3H4Q9UPT8 1303 aaKnown RBP22.06■■□□□ 1.12
LMNB2-202ENST00000475819 A0A087WZG4 1122 aa22.06■■□□□ 1.12
LMNB2-202ENST00000475819 SMC1BQ8NDV3 1235 aa22.06■■□□□ 1.12
LMNB2-202ENST00000475819 APAF1O14727 1248 aa22.05■■□□□ 1.12
LMNB2-202ENST00000475819 GAS2L2Q8NHY3 880 aa22.05■■□□□ 1.12
LMNB2-202ENST00000475819 BCL2L12Q9HB09 334 aa22.05■■□□□ 1.12
LMNB2-202ENST00000475819 CACNA1SQ13698 1873 aa22.05■■□□□ 1.12
LMNB2-202ENST00000475819 SIPA1L3O60292 1781 aaPredicted RBP22.04■■□□□ 1.12
LMNB2-202ENST00000475819 COL11A2P13942 1736 aaPredicted RBP22.04■■□□□ 1.12
LMNB2-202ENST00000475819 GNAT3A8MTJ3 354 aa22.04■■□□□ 1.12
LMNB2-202ENST00000475819 DNAJC5GQ8N7S2 189 aa22.04■■□□□ 1.12
LMNB2-202ENST00000475819 ZNF622Q969S3 477 aaKnown RBP eCLIP22.04■■□□□ 1.12
LMNB2-202ENST00000475819 ANKRD31Q8N7Z5 1873 aa22.03■■□□□ 1.12
LMNB2-202ENST00000475819 HEG1Q9ULI3 1381 aa22.03■■□□□ 1.12
LMNB2-202ENST00000475819 KLRG1Q96E93 195 aa22.03■■□□□ 1.12
LMNB2-202ENST00000475819 ZNF219Q9P2Y4 722 aaPredicted RBP22.03■■□□□ 1.12
LMNB2-202ENST00000475819 ZNF496Q96IT1 587 aaPredicted RBP22.02■■□□□ 1.12
LMNB2-202ENST00000475819 SLC34A2O95436 690 aa22.01■■□□□ 1.11
LMNB2-202ENST00000475819 TBC1D9BQ66K14 1250 aa22.01■■□□□ 1.11
LMNB2-202ENST00000475819 ZNF790Q6PG37 636 aa22.01■■□□□ 1.11
LMNB2-202ENST00000475819 TBC1D2BQ9UPU7 963 aa22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms