RNA–Protein interactions for RNA: ENST00000475298.5

CCNL1-216, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 2,362 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-216ENST00000475298 CCDC30Q5VVM6 783 aa15.8■□□□□ 0.12
CCNL1-216ENST00000475298 LMBRD1Q9NUN5 540 aa15.8■□□□□ 0.12
CCNL1-216ENST00000475298 HMMRO75330 724 aa15.8■□□□□ 0.12
CCNL1-216ENST00000475298 LTN1O94822 1766 aa15.8■□□□□ 0.12
CCNL1-216ENST00000475298 GNAI2P04899 355 aa15.79■□□□□ 0.12
CCNL1-216ENST00000475298 GTF2F1P35269 517 aaKnown RBP eCLIP15.79■□□□□ 0.12
CCNL1-216ENST00000475298 IPO4Q8TEX9 1081 aaKnown RBP15.79■□□□□ 0.12
CCNL1-216ENST00000475298 USP26Q9BXU7 913 aa15.79■□□□□ 0.12
CCNL1-216ENST00000475298 PNMA6EA0A0J9YXQ4 647 aa15.79■□□□□ 0.12
CCNL1-216ENST00000475298 TAF7Q15545 349 aaPredicted RBP15.79■□□□□ 0.12
CCNL1-216ENST00000475298 MCTP1Q6DN14 999 aa15.79■□□□□ 0.12
CCNL1-216ENST00000475298 ESCO1Q5FWF5 840 aa15.78■□□□□ 0.12
CCNL1-216ENST00000475298 NBPF6Q5VWK0 638 aa15.78■□□□□ 0.12
CCNL1-216ENST00000475298 NBPF4Q96M43 638 aa15.78■□□□□ 0.12
CCNL1-216ENST00000475298 PHAXQ9H814 394 aaKnown RBP15.78■□□□□ 0.12
CCNL1-216ENST00000475298 USP54Q70EL1 1684 aa15.77■□□□□ 0.12
CCNL1-216ENST00000475298 LGR6Q9HBX8 967 aa15.77■□□□□ 0.12
CCNL1-216ENST00000475298 CHD2O14647 1828 aaKnown RBP15.77■□□□□ 0.11
CCNL1-216ENST00000475298 PDE1AP54750 535 aa15.77■□□□□ 0.11
CCNL1-216ENST00000475298 LRRC59Q96AG4 307 aaKnown RBP15.77■□□□□ 0.11
CCNL1-216ENST00000475298 HDGFL1Q5TGJ6 251 aa15.76■□□□□ 0.11
CCNL1-216ENST00000475298 ANKLE2Q86XL3 938 aa15.76■□□□□ 0.11
CCNL1-216ENST00000475298 RBM27Q9P2N5 1060 aaKnown RBP15.76■□□□□ 0.11
CCNL1-216ENST00000475298 LRRFIP2Q9Y608 721 aaKnown RBP15.76■□□□□ 0.11
CCNL1-216ENST00000475298 PSME1Q06323 249 aa15.76■□□□□ 0.11
CCNL1-216ENST00000475298 GPT2Q8TD30 523 aa15.76■□□□□ 0.11
CCNL1-216ENST00000475298 IP6K1Q92551 441 aa15.76■□□□□ 0.11
CCNL1-216ENST00000475298 PRIMPOLQ96LW4 560 aa15.76■□□□□ 0.11
CCNL1-216ENST00000475298 CYP2E1P05181 493 aaPredicted RBP15.75■□□□□ 0.11
CCNL1-216ENST00000475298 EIF2S2P20042 333 aaKnown RBP15.75■□□□□ 0.11
CCNL1-216ENST00000475298 KIAA2012Q0VF49 1180 aa15.75■□□□□ 0.11
CCNL1-216ENST00000475298 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.75■□□□□ 0.11
CCNL1-216ENST00000475298 RGPD2P0DJD1 1756 aa15.75■□□□□ 0.11
CCNL1-216ENST00000475298 KCNQ3O43525 872 aa15.75■□□□□ 0.11
CCNL1-216ENST00000475298 HMGN5P82970 282 aaKnown RBP15.75■□□□□ 0.11
CCNL1-216ENST00000475298 ZNF830Q96NB3 372 aaPredicted RBP15.75■□□□□ 0.11
CCNL1-216ENST00000475298 NFAT5O94916 1531 aa15.75■□□□□ 0.11
CCNL1-216ENST00000475298 GNAI3P08754 354 aa15.74■□□□□ 0.11
CCNL1-216ENST00000475298 RABEP1Q15276 862 aa15.74■□□□□ 0.11
CCNL1-216ENST00000475298 FAM177BA6PVY3 158 aa15.73■□□□□ 0.11
CCNL1-216ENST00000475298 VGLL3A8MV65 326 aa15.73■□□□□ 0.11
CCNL1-216ENST00000475298 CASC1Q6TDU7 716 aa15.73■□□□□ 0.11
CCNL1-216ENST00000475298 LRSAM1Q6UWE0 723 aa15.73■□□□□ 0.11
CCNL1-216ENST00000475298 USP44Q9H0E7 712 aa15.73■□□□□ 0.11
CCNL1-216ENST00000475298 ATP8B2P98198 1209 aa15.73■□□□□ 0.11
CCNL1-216ENST00000475298 LRRCC1Q9C099 1032 aa15.73■□□□□ 0.11
CCNL1-216ENST00000475298 SPDYE4A6NLX3 237 aa15.72■□□□□ 0.11
CCNL1-216ENST00000475298 ZBTB22O15209 634 aa15.72■□□□□ 0.11
CCNL1-216ENST00000475298 ANXA1P04083 346 aa15.72■□□□□ 0.11
CCNL1-216ENST00000475298 ORAI2Q96SN7 254 aa15.72■□□□□ 0.11
CCNL1-216ENST00000475298 OSBPL3Q9H4L5 887 aa15.72■□□□□ 0.11
CCNL1-216ENST00000475298 SALL3Q9BXA9 1300 aa15.72■□□□□ 0.11
CCNL1-216ENST00000475298 PKP1Q13835 747 aa15.72■□□□□ 0.11
CCNL1-216ENST00000475298 TMEM63CQ9P1W3 806 aa15.72■□□□□ 0.11
CCNL1-216ENST00000475298 CEMIPQ8WUJ3 1361 aa15.72■□□□□ 0.11
CCNL1-216ENST00000475298 TAF3Q5VWG9 929 aa15.71■□□□□ 0.11
CCNL1-216ENST00000475298 CACNA1FO60840 1977 aa15.71■□□□□ 0.11
CCNL1-216ENST00000475298 ERC2O15083 957 aa15.71■□□□□ 0.11
CCNL1-216ENST00000475298 IGSF3O75054 1194 aa15.71■□□□□ 0.11
CCNL1-216ENST00000475298 MX1P20591 662 aa15.71■□□□□ 0.11
CCNL1-216ENST00000475298 EIF4A1P60842 406 aaKnown RBP15.71■□□□□ 0.11
CCNL1-216ENST00000475298 LMOD2Q6P5Q4 547 aa15.71■□□□□ 0.11
CCNL1-216ENST00000475298 MPRIPQ6WCQ1 1025 aa15.71■□□□□ 0.11
CCNL1-216ENST00000475298 BCL2L12Q9HB09 334 aa15.71■□□□□ 0.11
CCNL1-216ENST00000475298 CHPF2Q9P2E5 772 aa15.71■□□□□ 0.11
CCNL1-216ENST00000475298 SYCE3A1L190 88 aa15.7■□□□□ 0.1
CCNL1-216ENST00000475298 UBTFL1P0CB47 393 aaPredicted RBP15.7■□□□□ 0.1
CCNL1-216ENST00000475298 DNTTIP2Q5QJE6 756 aaKnown RBP15.7■□□□□ 0.1
CCNL1-216ENST00000475298 IL1RAPL2Q9NP60 686 aa15.7■□□□□ 0.1
CCNL1-216ENST00000475298 ADGRL3Q9HAR2 1447 aa15.7■□□□□ 0.1
CCNL1-216ENST00000475298 PRPF40AO75400 957 aaKnown RBP15.7■□□□□ 0.1
CCNL1-216ENST00000475298 ZNF530Q6P9A1 599 aaPredicted RBP15.7■□□□□ 0.1
CCNL1-216ENST00000475298 BABAM1Q9NWV8 329 aa15.7■□□□□ 0.1
CCNL1-216ENST00000475298 REC8O95072 547 aa15.69■□□□□ 0.1
CCNL1-216ENST00000475298 PIBF1Q8WXW3 757 aa15.69■□□□□ 0.1
CCNL1-216ENST00000475298 RILPL2Q969X0 211 aa15.69■□□□□ 0.1
CCNL1-216ENST00000475298 NSFL1CQ9UNZ2 370 aaKnown RBP15.69■□□□□ 0.1
CCNL1-216ENST00000475298 KIF3AQ9Y496 699 aa15.69■□□□□ 0.1
CCNL1-216ENST00000475298 NUCB2P80303 420 aa15.69■□□□□ 0.1
CCNL1-216ENST00000475298 UNC5CLQ8IV45 518 aa15.69■□□□□ 0.1
CCNL1-216ENST00000475298 CGNQ9P2M7 1197 aaKnown RBP15.69■□□□□ 0.1
CCNL1-216ENST00000475298 TRIM6-TRIM34B2RNG4 842 aa15.68■□□□□ 0.1
CCNL1-216ENST00000475298 RNF214Q8ND24 703 aa15.68■□□□□ 0.1
CCNL1-216ENST00000475298 TUBGCP6Q96RT7 1819 aa15.68■□□□□ 0.1
CCNL1-216ENST00000475298 N4BP2Q86UW6 1770 aaPredicted RBP15.68■□□□□ 0.1
CCNL1-216ENST00000475298 NBPF7P0C2Y1 421 aaPredicted RBP15.68■□□□□ 0.1
CCNL1-216ENST00000475298 NOLC1Q14978 699 aaKnown RBP eCLIP15.68■□□□□ 0.16e-7■■■■□ 22.4
CCNL1-216ENST00000475298 PXDNQ92626 1479 aa15.68■□□□□ 0.1
CCNL1-216ENST00000475298 MED1Q15648 1581 aaPredicted RBP15.68■□□□□ 0.1
CCNL1-216ENST00000475298 SOS1Q07889 1333 aaPredicted RBP15.67■□□□□ 0.1
CCNL1-216ENST00000475298 PXDNLA1KZ92 1463 aa15.67■□□□□ 0.1
CCNL1-216ENST00000475298 GCP02774 474 aa15.67■□□□□ 0.1
CCNL1-216ENST00000475298 TAF7LQ5H9L4 462 aa15.67■□□□□ 0.1
CCNL1-216ENST00000475298 PPP1R42Q7Z4L9 355 aa15.67■□□□□ 0.1
CCNL1-216ENST00000475298 NUTM1Q86Y26 1132 aa15.67■□□□□ 0.1
CCNL1-216ENST00000475298 PDCL2Q8N4E4 241 aa15.67■□□□□ 0.1
CCNL1-216ENST00000475298 ZGPATQ8N5A5 531 aaKnown RBP15.67■□□□□ 0.1
CCNL1-216ENST00000475298 KCNH5Q8NCM2 988 aa15.67■□□□□ 0.1
CCNL1-216ENST00000475298 SRCIN1Q9C0H9 1055 aa15.67■□□□□ 0.1
CCNL1-216ENST00000475298 PI4KAP2A4QPH2 592 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms