RNA–Protein interactions for RNA: ENST00000475189.1

SRM-204, Transcript of spermidine synthase, humanhuman

TSL 2

Gene SRM, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-204ENST00000475189 ARHGEF1Q92888 912 aaKnown RBP21.3■■□□□ 1
SRM-204ENST00000475189 STARD3NLO95772 234 aa21.29■■□□□ 1
SRM-204ENST00000475189 PRAMEF22A3QJZ6 481 aa21.28■■□□□ 1
SRM-204ENST00000475189 SNRPA1P09661 255 aaKnown RBP21.28■■□□□ 1
SRM-204ENST00000475189 MSL1Q68DK7 614 aa21.28■■□□□ 1
SRM-204ENST00000475189 PPP1R1BQ9UD71 204 aaPredicted RBP21.28■■□□□ 1
SRM-204ENST00000475189 ZBTB1Q9Y2K1 713 aa21.28■■□□□ 1
SRM-204ENST00000475189 USP16Q9Y5T5 823 aa21.28■■□□□ 1
SRM-204ENST00000475189 EIF4A1P60842 406 aaKnown RBP21.27■■□□□ 1
SRM-204ENST00000475189 BABAM1Q9NWV8 329 aa21.27■■□□□ 1
SRM-204ENST00000475189 SOS1Q07889 1333 aaPredicted RBP21.27■□□□□ 0.99
SRM-204ENST00000475189 TSPYL4Q9UJ04 414 aa21.26■□□□□ 0.99
SRM-204ENST00000475189 CANXP27824 592 aaKnown RBP21.25■□□□□ 0.99
SRM-204ENST00000475189 POLD1P28340 1107 aa21.25■□□□□ 0.99
SRM-204ENST00000475189 RFC4P35249 363 aa21.25■□□□□ 0.99
SRM-204ENST00000475189 FAM9BQ8IZU0 186 aa21.25■□□□□ 0.99
SRM-204ENST00000475189 ARXQ96QS3 562 aa21.25■□□□□ 0.99
SRM-204ENST00000475189 LAMB4A4D0S4 1761 aa21.25■□□□□ 0.99
SRM-204ENST00000475189 A1BGP04217 495 aa21.24■□□□□ 0.99
SRM-204ENST00000475189 SENP3-EIF4A1A0A087X0R7 540 aa21.23■□□□□ 0.99
SRM-204ENST00000475189 CHL1O00533 1208 aa21.23■□□□□ 0.99
SRM-204ENST00000475189 GIGYF1O75420 1035 aaPredicted RBP21.23■□□□□ 0.99
SRM-204ENST00000475189 COL15A1P39059 1388 aa21.23■□□□□ 0.99
SRM-204ENST00000475189 GYS1P13807 737 aa21.22■□□□□ 0.99
SRM-204ENST00000475189 EIF5P55010 431 aaKnown RBP21.22■□□□□ 0.99
SRM-204ENST00000475189 DIEXFQ68CQ4 756 aaKnown RBP21.22■□□□□ 0.99
SRM-204ENST00000475189 SRP68Q9UHB9 627 aaKnown RBP21.22■□□□□ 0.99
SRM-204ENST00000475189 LAS1LQ9Y4W2 734 aaKnown RBP21.22■□□□□ 0.99
SRM-204ENST00000475189 USP42Q9H9J4 1324 aaKnown RBP21.21■□□□□ 0.99
SRM-204ENST00000475189 CCER2I3L3R5 266 aa21.2■□□□□ 0.98
SRM-204ENST00000475189 IL6STP40189 918 aaPredicted RBP21.2■□□□□ 0.98
SRM-204ENST00000475189 CCDC27Q2M243 656 aa21.2■□□□□ 0.98
SRM-204ENST00000475189 CFAP44Q96MT7 982 aa21.2■□□□□ 0.98
SRM-204ENST00000475189 ZNF853P0CG23 659 aa21.19■□□□□ 0.98
SRM-204ENST00000475189 NCBP3Q53F19 620 aaKnown RBP21.19■□□□□ 0.98
SRM-204ENST00000475189 NLGN1Q8N2Q7 840 aa21.19■□□□□ 0.98
SRM-204ENST00000475189 FHDC1Q9C0D6 1143 aaPredicted RBP21.19■□□□□ 0.98
SRM-204ENST00000475189 ZPR1O75312 459 aa21.18■□□□□ 0.98
SRM-204ENST00000475189 PIP4K2AP48426 406 aaPredicted RBP21.18■□□□□ 0.98
SRM-204ENST00000475189 CALD1Q05682 793 aaKnown RBP21.18■□□□□ 0.98
SRM-204ENST00000475189 NARFQ9UHQ1 456 aa21.18■□□□□ 0.98
SRM-204ENST00000475189 A0A087WZG4 1122 aa21.17■□□□□ 0.98
SRM-204ENST00000475189 NBPF26B4DH59 902 aa21.17■□□□□ 0.98
SRM-204ENST00000475189 USPL1Q5W0Q7 1092 aa21.17■□□□□ 0.98
SRM-204ENST00000475189 NBPF10Q6P3W6 841 aaKnown RBP21.17■□□□□ 0.98
SRM-204ENST00000475189 WWC1Q8IX03 1113 aa21.17■□□□□ 0.98
SRM-204ENST00000475189 NBPF15Q8N660 670 aa21.17■□□□□ 0.98
SRM-204ENST00000475189 IFT57Q9NWB7 429 aa21.17■□□□□ 0.98
SRM-204ENST00000475189 FKBP8Q14318 412 aa21.16■□□□□ 0.98
SRM-204ENST00000475189 SYT17Q9BSW7 474 aa21.16■□□□□ 0.98
SRM-204ENST00000475189 MBIPQ9NS73 344 aa21.16■□□□□ 0.98
SRM-204ENST00000475189 ZNF330Q9Y3S2 320 aaPredicted RBP21.16■□□□□ 0.98
SRM-204ENST00000475189 MMP10P09238 476 aa21.15■□□□□ 0.98
SRM-204ENST00000475189 GNAI1P63096 354 aa21.15■□□□□ 0.98
SRM-204ENST00000475189 KRT24Q2M2I5 525 aa21.15■□□□□ 0.98
SRM-204ENST00000475189 BCL2L12Q9HB09 334 aa21.15■□□□□ 0.98
SRM-204ENST00000475189 TBC1D2BQ9UPU7 963 aa21.14■□□□□ 0.97
SRM-204ENST00000475189 SCN7AQ01118 1682 aa21.13■□□□□ 0.97
SRM-204ENST00000475189 NPM2Q86SE8 214 aaKnown RBP21.13■□□□□ 0.97
SRM-204ENST00000475189 MIER1Q8N108 512 aa21.13■□□□□ 0.97
SRM-204ENST00000475189 SALL2Q9Y467 1007 aaPredicted RBP21.13■□□□□ 0.97
SRM-204ENST00000475189 BCORQ6W2J9 1755 aa21.13■□□□□ 0.97
SRM-204ENST00000475189 KLHL34Q8N239 644 aa21.12■□□□□ 0.97
SRM-204ENST00000475189 EIF2S2P20042 333 aaKnown RBP21.11■□□□□ 0.97
SRM-204ENST00000475189 TM4SF1P30408 202 aa21.11■□□□□ 0.97
SRM-204ENST00000475189 DZIP3Q86Y13 1208 aaKnown RBP21.11■□□□□ 0.97
SRM-204ENST00000475189 ERBB4Q15303 1308 aa21.1■□□□□ 0.97
SRM-204ENST00000475189 CAMTA2O94983 1202 aa21.1■□□□□ 0.97
SRM-204ENST00000475189 NGEFQ8N5V2 710 aa21.1■□□□□ 0.97
SRM-204ENST00000475189 PARP3Q9Y6F1 533 aa21.1■□□□□ 0.97
SRM-204ENST00000475189 IL16Q14005 1332 aa21.09■□□□□ 0.97
SRM-204ENST00000475189 AFDNP55196 1824 aaKnown RBP21.09■□□□□ 0.97
SRM-204ENST00000475189 KIF13BQ9NQT8 1826 aa21.09■□□□□ 0.97
SRM-204ENST00000475189 DDR1Q08345 913 aa21.09■□□□□ 0.97
SRM-204ENST00000475189 PDIA6Q15084 440 aa21.09■□□□□ 0.97
SRM-204ENST00000475189 HOXB7P09629 217 aa21.08■□□□□ 0.97
SRM-204ENST00000475189 MYL6BP14649 208 aa21.08■□□□□ 0.97
SRM-204ENST00000475189 NFIXQ14938 502 aa21.08■□□□□ 0.97
SRM-204ENST00000475189 WDR63Q8IWG1 891 aa21.08■□□□□ 0.97
SRM-204ENST00000475189 NLGN2Q8NFZ4 835 aa21.08■□□□□ 0.97
SRM-204ENST00000475189 CD2APQ9Y5K6 639 aa21.08■□□□□ 0.97
SRM-204ENST00000475189 POLRMTO00411 1230 aaKnown RBP21.07■□□□□ 0.96
SRM-204ENST00000475189 DUSP27Q5VZP5 1158 aa21.07■□□□□ 0.96
SRM-204ENST00000475189 NECTIN2Q92692 538 aa21.07■□□□□ 0.96
SRM-204ENST00000475189 TBC1D9BQ66K14 1250 aa21.06■□□□□ 0.96
SRM-204ENST00000475189 LRP10Q7Z4F1 713 aa21.06■□□□□ 0.96
SRM-204ENST00000475189 TSR2Q969E8 191 aaKnown RBP21.06■□□□□ 0.96
SRM-204ENST00000475189 NUP98P52948 1817 aa21.06■□□□□ 0.96
SRM-204ENST00000475189 NRXN2Q9P2S2 1712 aa21.05■□□□□ 0.96
SRM-204ENST00000475189 PROSER3Q2NL68 480 aa21.05■□□□□ 0.96
SRM-204ENST00000475189 C8orf58Q8NAV2 365 aa21.05■□□□□ 0.96
SRM-204ENST00000475189 ANXA1P04083 346 aa21.04■□□□□ 0.96
SRM-204ENST00000475189 HDGFL1Q5TGJ6 251 aa21.04■□□□□ 0.96
SRM-204ENST00000475189 CLEC4GQ6UXB4 293 aa21.04■□□□□ 0.96
SRM-204ENST00000475189 BICDL1Q6ZP65 573 aa21.04■□□□□ 0.96
SRM-204ENST00000475189 TTLL7Q6ZT98 887 aa21.04■□□□□ 0.96
SRM-204ENST00000475189 C10orf71Q711Q0 1435 aa21.04■□□□□ 0.96
SRM-204ENST00000475189 ELL2O00472 640 aaPredicted RBP21.03■□□□□ 0.96
SRM-204ENST00000475189 DDX21Q9NR30 783 aaKnown RBP eCLIP21.03■□□□□ 0.96
SRM-204ENST00000475189 KIAA1551Q9HCM1 1747 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms