RNA–Protein interactions for RNA: ENST00000474956.1

RNF220-211, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 3,303 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-211ENST00000474956 LRRCC1Q9C099 1032 aa15.28■□□□□ 0.04
RNF220-211ENST00000474956 SOS1Q07889 1333 aaPredicted RBP15.28■□□□□ 0.04
RNF220-211ENST00000474956 GNAI3P08754 354 aa15.28■□□□□ 0.04
RNF220-211ENST00000474956 SRCIN1Q9C0H9 1055 aa15.28■□□□□ 0.04
RNF220-211ENST00000474956 GIGYF1O75420 1035 aaPredicted RBP15.27■□□□□ 0.04
RNF220-211ENST00000474956 SALL3Q9BXA9 1300 aa15.27■□□□□ 0.04
RNF220-211ENST00000474956 DNAAF4Q8WXU2 420 aa15.27■□□□□ 0.03
RNF220-211ENST00000474956 RILPL2Q969X0 211 aa15.27■□□□□ 0.03
RNF220-211ENST00000474956 NAP1L5Q96NT1 182 aaPredicted RBP15.27■□□□□ 0.03
RNF220-211ENST00000474956 CACNA1FO60840 1977 aa15.27■□□□□ 0.03
RNF220-211ENST00000474956 PHRF1Q9P1Y6 1649 aaKnown RBP15.27■□□□□ 0.03
RNF220-211ENST00000474956 MAP3K2Q9Y2U5 619 aa15.27■□□□□ 0.03
RNF220-211ENST00000474956 IBTKQ9P2D0 1353 aaPredicted RBP15.26■□□□□ 0.03
RNF220-211ENST00000474956 SRGAP3O43295 1099 aa15.26■□□□□ 0.03
RNF220-211ENST00000474956 SURF6O75683 361 aaKnown RBP15.26■□□□□ 0.03
RNF220-211ENST00000474956 NFATC2IPQ8NCF5 419 aa15.26■□□□□ 0.03
RNF220-211ENST00000474956 JARID2Q92833 1246 aaPredicted RBP15.26■□□□□ 0.03
RNF220-211ENST00000474956 CSB-PGBD3P0DP91 1061 aa15.26■□□□□ 0.03
RNF220-211ENST00000474956 MX1P20591 662 aa15.26■□□□□ 0.03
RNF220-211ENST00000474956 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.26■□□□□ 0.03
RNF220-211ENST00000474956 MEGF6O75095 1541 aa15.26■□□□□ 0.03
RNF220-211ENST00000474956 TRIM6-TRIM34B2RNG4 842 aa15.25■□□□□ 0.03
RNF220-211ENST00000474956 HSP90AA1P07900 732 aaKnown RBP15.25■□□□□ 0.03
RNF220-211ENST00000474956 MYL6BP14649 208 aa15.25■□□□□ 0.03
RNF220-211ENST00000474956 PA2G4Q9UQ80 394 aaKnown RBP15.25■□□□□ 0.03
RNF220-211ENST00000474956 ALS2Q96Q42 1657 aa15.25■□□□□ 0.03
RNF220-211ENST00000474956 AMOTQ4VCS5 1084 aa15.25■□□□□ 0.03
RNF220-211ENST00000474956 ESPNB1AK53 854 aa15.24■□□□□ 0.03
RNF220-211ENST00000474956 BABAM1Q9NWV8 329 aa15.24■□□□□ 0.03
RNF220-211ENST00000474956 KDM6AO15550 1401 aaPredicted RBP15.24■□□□□ 0.03
RNF220-211ENST00000474956 K7ELQ4 463 aaPredicted RBP15.24■□□□□ 0.03
RNF220-211ENST00000474956 NCAPD2Q15021 1401 aa15.23■□□□□ 0.03
RNF220-211ENST00000474956 PKP1Q13835 747 aa15.23■□□□□ 0.03
RNF220-211ENST00000474956 TRIM44Q96DX7 344 aaPredicted RBP15.23■□□□□ 0.03
RNF220-211ENST00000474956 PALD1Q9ULE6 856 aa15.23■□□□□ 0.03
RNF220-211ENST00000474956 SSH3Q8TE77 659 aa15.23■□□□□ 0.03
RNF220-211ENST00000474956 CHAMP1Q96JM3 812 aa15.23■□□□□ 0.03
RNF220-211ENST00000474956 PDIA6Q15084 440 aa15.22■□□□□ 0.03
RNF220-211ENST00000474956 RAPGEF4Q8WZA2 1011 aa15.22■□□□□ 0.03
RNF220-211ENST00000474956 NOL8Q76FK4 1167 aaKnown RBP15.22■□□□□ 0.03
RNF220-211ENST00000474956 TUBGCP6Q96RT7 1819 aa15.22■□□□□ 0.03
RNF220-211ENST00000474956 CYP27B1O15528 508 aa15.22■□□□□ 0.03
RNF220-211ENST00000474956 OSBPL3Q9H4L5 887 aa15.22■□□□□ 0.03
RNF220-211ENST00000474956 DBF4Q9UBU7 674 aaPredicted RBP15.22■□□□□ 0.03
RNF220-211ENST00000474956 SSFA2P28290 1259 aa15.21■□□□□ 0.03
RNF220-211ENST00000474956 GAS2L3Q86XJ1 694 aa15.21■□□□□ 0.03
RNF220-211ENST00000474956 N4BP2Q86UW6 1770 aaPredicted RBP15.21■□□□□ 0.03
RNF220-211ENST00000474956 KLHDC4Q8TBB5 520 aa15.21■□□□□ 0.03
RNF220-211ENST00000474956 ZNF496Q96IT1 587 aaPredicted RBP15.21■□□□□ 0.03
RNF220-211ENST00000474956 NPHP3Q7Z494 1330 aa15.21■□□□□ 0.02
RNF220-211ENST00000474956 GOLGA6L22H0YM25 854 aa15.2■□□□□ 0.02
RNF220-211ENST00000474956 PHKG2P15735 406 aa15.2■□□□□ 0.02
RNF220-211ENST00000474956 POLA2Q14181 598 aa15.2■□□□□ 0.02
RNF220-211ENST00000474956 ZGPATQ8N5A5 531 aaKnown RBP15.2■□□□□ 0.02
RNF220-211ENST00000474956 RHPN1Q8TCX5 695 aa15.2■□□□□ 0.02
RNF220-211ENST00000474956 USP16Q9Y5T5 823 aa15.2■□□□□ 0.02
RNF220-211ENST00000474956 ZNF790Q6PG37 636 aa15.2■□□□□ 0.02
RNF220-211ENST00000474956 C5P01031 1676 aa15.2■□□□□ 0.02
RNF220-211ENST00000474956 PXDNLA1KZ92 1463 aa15.2■□□□□ 0.02
RNF220-211ENST00000474956 ERC2O15083 957 aa15.2■□□□□ 0.02
RNF220-211ENST00000474956 DTNBO60941 627 aa15.2■□□□□ 0.02
RNF220-211ENST00000474956 CLEC17AQ6ZS10 378 aa15.2■□□□□ 0.02
RNF220-211ENST00000474956 KAZALD1Q96I82 304 aa15.2■□□□□ 0.02
RNF220-211ENST00000474956 SIPA1L3O60292 1781 aaPredicted RBP15.2■□□□□ 0.02
RNF220-211ENST00000474956 HEG1Q9ULI3 1381 aa15.19■□□□□ 0.02
RNF220-211ENST00000474956 CAMTA1Q9Y6Y1 1673 aa15.19■□□□□ 0.02
RNF220-211ENST00000474956 CHMLP26374 656 aa15.19■□□□□ 0.02
RNF220-211ENST00000474956 C9orf78Q9NZ63 289 aaPredicted RBP15.19■□□□□ 0.02
RNF220-211ENST00000474956 KIF1AQ12756 1690 aa15.19■□□□□ 0.02
RNF220-211ENST00000474956 ESYT1Q9BSJ8 1104 aa15.19■□□□□ 0.02
RNF220-211ENST00000474956 SLC52A2Q9HAB3 445 aa15.19■□□□□ 0.02
RNF220-211ENST00000474956 SUCLG2Q96I99 432 aa15.18■□□□□ 0.02
RNF220-211ENST00000474956 ANO2Q9NQ90 1003 aa15.18■□□□□ 0.02
RNF220-211ENST00000474956 COL18A1P39060 1754 aa15.18■□□□□ 0.02
RNF220-211ENST00000474956 HOXB7P09629 217 aa15.18■□□□□ 0.02
RNF220-211ENST00000474956 DNAJC5Q9H3Z4 198 aa15.18■□□□□ 0.02
RNF220-211ENST00000474956 ERBB4Q15303 1308 aa15.18■□□□□ 0.02
RNF220-211ENST00000474956 IGKV5-2P06315 115 aa15.17■□□□□ 0.02
RNF220-211ENST00000474956 TATP17735 454 aaPredicted RBP15.17■□□□□ 0.02
RNF220-211ENST00000474956 KSR2Q6VAB6 950 aa15.17■□□□□ 0.02
RNF220-211ENST00000474956 BRINP3Q76B58 766 aa15.17■□□□□ 0.02
RNF220-211ENST00000474956 PI4K2BQ8TCG2 481 aa15.17■□□□□ 0.02
RNF220-211ENST00000474956 SIL1Q9H173 461 aa15.17■□□□□ 0.02
RNF220-211ENST00000474956 ZNF335Q9H4Z2 1342 aaPredicted RBP15.17■□□□□ 0.02
RNF220-211ENST00000474956 CASC1Q6TDU7 716 aa15.17■□□□□ 0.02
RNF220-211ENST00000474956 XAGE3Q8WTP9 111 aa15.17■□□□□ 0.02
RNF220-211ENST00000474956 OS9Q13438 667 aaPredicted RBP15.16■□□□□ 0.02
RNF220-211ENST00000474956 FOXD4L5Q5VV16 416 aaPredicted RBP15.16■□□□□ 0.02
RNF220-211ENST00000474956 FOXD4L4Q8WXT5 416 aaPredicted RBP15.16■□□□□ 0.02
RNF220-211ENST00000474956 BICC1Q9H694 974 aaKnown RBP15.16■□□□□ 0.02
RNF220-211ENST00000474956 CRYBG1Q9Y4K1 1723 aa15.16■□□□□ 0.02
RNF220-211ENST00000474956 XIRP1Q702N8 1843 aaKnown RBP15.16■□□□□ 0.02
RNF220-211ENST00000474956 RABEP1Q15276 862 aa15.16■□□□□ 0.02
RNF220-211ENST00000474956 KLHL40Q2TBA0 621 aa15.16■□□□□ 0.02
RNF220-211ENST00000474956 GLIPR1L2Q4G1C9 344 aa15.16■□□□□ 0.02
RNF220-211ENST00000474956 EPHA10Q5JZY3 1008 aa15.16■□□□□ 0.02
RNF220-211ENST00000474956 COPS6Q7L5N1 327 aa15.16■□□□□ 0.02
RNF220-211ENST00000474956 UPF3BQ9BZI7 483 aaKnown RBP15.16■□□□□ 0.02
RNF220-211ENST00000474956 SPATA31A3Q5VYP0 1347 aa15.16■□□□□ 0.02
RNF220-211ENST00000474956 CCDC173Q0VFZ6 552 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms