RNA–Protein interactions for RNA: ENST00000474539.5

CCNL1-215, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 4,799 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-215ENST00000474539 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.48□□□□□ -1.532e-10■■■□□ 15.4
CCNL1-215ENST00000474539 GOLGA6L19H0YKK7 550 aa5.48□□□□□ -1.53
CCNL1-215ENST00000474539 C6orf229H3BNL8 230 aa5.48□□□□□ -1.53
CCNL1-215ENST00000474539 ELL2O00472 640 aaPredicted RBP5.48□□□□□ -1.53
CCNL1-215ENST00000474539 POTEJP0CG39 1038 aa5.48□□□□□ -1.53
CCNL1-215ENST00000474539 IMMTQ16891 758 aaKnown RBP5.48□□□□□ -1.53
CCNL1-215ENST00000474539 STXBP4Q6ZWJ1 553 aa5.48□□□□□ -1.53
CCNL1-215ENST00000474539 ZNF622Q969S3 477 aaKnown RBP eCLIP5.48□□□□□ -1.538e-10■■■□□ 18.2
CCNL1-215ENST00000474539 AIDAQ96BJ3 306 aa5.48□□□□□ -1.53
CCNL1-215ENST00000474539 FANCIQ9NVI1 1328 aa5.48□□□□□ -1.53
CCNL1-215ENST00000474539 UGGT1Q9NYU2 1555 aa5.48□□□□□ -1.53
CCNL1-215ENST00000474539 SBNO1A3KN83 1393 aa5.47□□□□□ -1.53
CCNL1-215ENST00000474539 PLIN1O60240 522 aa5.47□□□□□ -1.53
CCNL1-215ENST00000474539 GLRX3O76003 335 aaKnown RBP5.47□□□□□ -1.53
CCNL1-215ENST00000474539 KIF5BP33176 963 aa5.47□□□□□ -1.53
CCNL1-215ENST00000474539 EPS15P42566 896 aa5.47□□□□□ -1.53
CCNL1-215ENST00000474539 TDO2P48775 406 aa5.47□□□□□ -1.53
CCNL1-215ENST00000474539 PDE4BQ07343 736 aa5.47□□□□□ -1.53
CCNL1-215ENST00000474539 KIF22Q14807 665 aa5.47□□□□□ -1.53
CCNL1-215ENST00000474539 WAPLQ7Z5K2 1190 aa5.47□□□□□ -1.53
CCNL1-215ENST00000474539 IQCA1Q86XH1 822 aa5.47□□□□□ -1.53
CCNL1-215ENST00000474539 FERMT2Q96AC1 680 aa5.47□□□□□ -1.53
CCNL1-215ENST00000474539 NCOA3Q9Y6Q9 1424 aa5.47□□□□□ -1.53
CCNL1-215ENST00000474539 ERVV-2B6SEH9 535 aa5.47□□□□□ -1.53
CCNL1-215ENST00000474539 TCIRG1Q13488 830 aa5.47□□□□□ -1.53
CCNL1-215ENST00000474539 TNFAIP1Q13829 316 aa5.47□□□□□ -1.53
CCNL1-215ENST00000474539 B4GALNT3Q6L9W6 998 aa5.47□□□□□ -1.53
CCNL1-215ENST00000474539 CCDC125Q86Z20 511 aa5.47□□□□□ -1.53
CCNL1-215ENST00000474539 ZNF444Q8N0Y2 327 aaPredicted RBP5.47□□□□□ -1.53
CCNL1-215ENST00000474539 CNKSR1Q969H4 720 aa5.47□□□□□ -1.53
CCNL1-215ENST00000474539 RSPH6AQ9H0K4 717 aa5.47□□□□□ -1.53
CCNL1-215ENST00000474539 GLT8D2Q9H1C3 349 aa5.47□□□□□ -1.53
CCNL1-215ENST00000474539 SMC3Q9UQE7 1217 aa5.47□□□□□ -1.53
CCNL1-215ENST00000474539 CLEC11AQ9Y240 323 aa5.47□□□□□ -1.53
CCNL1-215ENST00000474539 STK24Q9Y6E0 443 aa5.47□□□□□ -1.53
CCNL1-215ENST00000474539 H0YIN7 160 aa5.47□□□□□ -1.53
CCNL1-215ENST00000474539 PPP1R12BO60237 982 aaPredicted RBP5.47□□□□□ -1.53
CCNL1-215ENST00000474539 GNAT2P19087 354 aa5.47□□□□□ -1.53
CCNL1-215ENST00000474539 CCDC173Q0VFZ6 552 aa5.47□□□□□ -1.53
CCNL1-215ENST00000474539 FAM161AQ3B820 660 aa5.47□□□□□ -1.53
CCNL1-215ENST00000474539 NLGN1Q8N2Q7 840 aa5.47□□□□□ -1.53
CCNL1-215ENST00000474539 CRNKL1Q9BZJ0 848 aaKnown RBP5.47□□□□□ -1.53
CCNL1-215ENST00000474539 ZC3H12CQ9C0D7 883 aaKnown RBP5.47□□□□□ -1.53
CCNL1-215ENST00000474539 CHD1O14646 1710 aa5.47□□□□□ -1.53
CCNL1-215ENST00000474539 PLEKHG3A1L390 1219 aa5.47□□□□□ -1.53
CCNL1-215ENST00000474539 SYCP1Q15431 976 aa5.47□□□□□ -1.53
CCNL1-215ENST00000474539 DNAAF4Q8WXU2 420 aa5.47□□□□□ -1.53
CCNL1-215ENST00000474539 CLUAP1Q96AJ1 413 aa5.47□□□□□ -1.53
CCNL1-215ENST00000474539 PODXL2Q9NZ53 605 aa5.47□□□□□ -1.53
CCNL1-215ENST00000474539 ADGRF5Q8IZF2 1346 aa5.47□□□□□ -1.53
CCNL1-215ENST00000474539 POLR3AO14802 1390 aaPredicted RBP5.46□□□□□ -1.53
CCNL1-215ENST00000474539 IGSF3O75054 1194 aa5.46□□□□□ -1.53
CCNL1-215ENST00000474539 BAG4O95429 457 aaKnown RBP5.46□□□□□ -1.53
CCNL1-215ENST00000474539 CDR1P51861 262 aa5.46□□□□□ -1.53
CCNL1-215ENST00000474539 OLFM4Q6UX06 510 aa5.46□□□□□ -1.53
CCNL1-215ENST00000474539 TMTC2Q8N394 836 aa5.46□□□□□ -1.53
CCNL1-215ENST00000474539 FAM135BQ49AJ0 1406 aa5.46□□□□□ -1.54
CCNL1-215ENST00000474539 ADGBQ8N7X0 1667 aa5.46□□□□□ -1.54
CCNL1-215ENST00000474539 ZNF76P36508 570 aa5.46□□□□□ -1.54
CCNL1-215ENST00000474539 NPC1L1Q9UHC9 1359 aa5.46□□□□□ -1.54
CCNL1-215ENST00000474539 PZPP20742 1482 aa5.46□□□□□ -1.54
CCNL1-215ENST00000474539 BECN2A8MW95 431 aa5.46□□□□□ -1.54
CCNL1-215ENST00000474539 GCP02774 474 aa5.46□□□□□ -1.54
CCNL1-215ENST00000474539 KRT18P05783 430 aaKnown RBP5.46□□□□□ -1.54
CCNL1-215ENST00000474539 TMPOP42166 694 aaKnown RBP5.46□□□□□ -1.54
CCNL1-215ENST00000474539 TBC1D22AQ8WUA7 517 aa5.46□□□□□ -1.54
CCNL1-215ENST00000474539 ARHGAP45Q92619 1136 aa5.46□□□□□ -1.54
CCNL1-215ENST00000474539 MKNK2Q9HBH9 465 aa5.46□□□□□ -1.54
CCNL1-215ENST00000474539 CCNL1Q9UK58 526 aaPredicted RBP5.46□□□□□ -1.54
CCNL1-215ENST00000474539 TAOK2Q9UL54 1235 aa5.46□□□□□ -1.54
CCNL1-215ENST00000474539 JCADQ9P266 1359 aa5.46□□□□□ -1.54
CCNL1-215ENST00000474539 CT47A1Q5JQC4 288 aaPredicted RBP5.46□□□□□ -1.54
CCNL1-215ENST00000474539 DUSP27Q5VZP5 1158 aa5.46□□□□□ -1.54
CCNL1-215ENST00000474539 MCTP2Q6DN12 878 aa5.46□□□□□ -1.54
CCNL1-215ENST00000474539 KCNG1Q9UIX4 513 aa5.46□□□□□ -1.54
CCNL1-215ENST00000474539 DKC1O60832 514 aaKnown RBP eCLIP5.45□□□□□ -1.54
CCNL1-215ENST00000474539 FGFR1OPO95684 399 aaKnown RBP5.45□□□□□ -1.54
CCNL1-215ENST00000474539 PLCB2Q00722 1185 aa5.45□□□□□ -1.54
CCNL1-215ENST00000474539 USP37Q86T82 979 aa5.45□□□□□ -1.54
CCNL1-215ENST00000474539 FEZ1Q99689 392 aa5.45□□□□□ -1.54
CCNL1-215ENST00000474539 COL17A1Q9UMD9 1497 aaPredicted RBP5.45□□□□□ -1.54
CCNL1-215ENST00000474539 FAM177BA6PVY3 158 aa5.45□□□□□ -1.54
CCNL1-215ENST00000474539 CCP110O43303 1012 aa5.45□□□□□ -1.54
CCNL1-215ENST00000474539 MYL6BP14649 208 aa5.45□□□□□ -1.54
CCNL1-215ENST00000474539 BICDL1Q6ZP65 573 aa5.45□□□□□ -1.54
CCNL1-215ENST00000474539 CCDC150Q8NCX0 1101 aa5.45□□□□□ -1.54
CCNL1-215ENST00000474539 CTCFLQ8NI51 663 aaPredicted RBP5.45□□□□□ -1.54
CCNL1-215ENST00000474539 FYB1O15117 783 aa5.45□□□□□ -1.54
CCNL1-215ENST00000474539 BMP15O95972 392 aa5.45□□□□□ -1.54
CCNL1-215ENST00000474539 GLI2P10070 1586 aa5.45□□□□□ -1.54
CCNL1-215ENST00000474539 HSPA2P54652 639 aa5.45□□□□□ -1.54
CCNL1-215ENST00000474539 XPCQ01831 940 aaPredicted RBP5.45□□□□□ -1.54
CCNL1-215ENST00000474539 NCBP1Q09161 790 aaKnown RBP5.45□□□□□ -1.54
CCNL1-215ENST00000474539 TMEM266Q2M3C6 531 aa5.45□□□□□ -1.54
CCNL1-215ENST00000474539 NBPF1Q3BBV0 1214 aa5.45□□□□□ -1.54
CCNL1-215ENST00000474539 FILIP1LQ4L180 1135 aa5.45□□□□□ -1.54
CCNL1-215ENST00000474539 RBM26Q5T8P6 1007 aaKnown RBP5.45□□□□□ -1.54
CCNL1-215ENST00000474539 RNF216Q9NWF9 866 aaPredicted RBP5.45□□□□□ -1.54
CCNL1-215ENST00000474539 MAGEC2Q9UBF1 373 aaPredicted RBP5.45□□□□□ -1.54
CCNL1-215ENST00000474539 MAP3K5Q99683 1374 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms