RNA–Protein interactions for RNA: ENST00000471440.6

CFHR3-205, Transcript of complement factor H related 3, humanhuman

TSL 1 (best) BASIC

Gene CFHR3, Length 1,965 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3-205ENST00000471440 USP17L3A6NCW0 530 aa6.77□□□□□ -1.33
CFHR3-205ENST00000471440 USP17L4A6NCW7 530 aa6.77□□□□□ -1.33
CFHR3-205ENST00000471440 UPP2O95045 317 aa6.77□□□□□ -1.33
CFHR3-205ENST00000471440 ADH1AP07327 375 aa6.77□□□□□ -1.33
CFHR3-205ENST00000471440 SKIP12755 728 aa6.77□□□□□ -1.33
CFHR3-205ENST00000471440 RELBQ01201 579 aa6.77□□□□□ -1.33
CFHR3-205ENST00000471440 KCNMA1Q12791 1236 aa6.77□□□□□ -1.33
CFHR3-205ENST00000471440 B4GALNT3Q6L9W6 998 aa6.77□□□□□ -1.33
CFHR3-205ENST00000471440 USP17L2Q6R6M4 530 aa6.77□□□□□ -1.33
CFHR3-205ENST00000471440 USP17L1Q7RTZ2 530 aa6.77□□□□□ -1.33
CFHR3-205ENST00000471440 ZFP42Q96MM3 310 aa6.77□□□□□ -1.33
CFHR3-205ENST00000471440 BMP2P12643 396 aa6.77□□□□□ -1.33
CFHR3-205ENST00000471440 TSEN34Q9BSV6 310 aaKnown RBP6.77□□□□□ -1.33
CFHR3-205ENST00000471440 CHD1O14646 1710 aa6.76□□□□□ -1.33
CFHR3-205ENST00000471440 ANKRD33BA6NCL7 494 aa6.76□□□□□ -1.33
CFHR3-205ENST00000471440 ERCC3P19447 782 aa6.76□□□□□ -1.33
CFHR3-205ENST00000471440 ARID4AP29374 1257 aaPredicted RBP6.76□□□□□ -1.33
CFHR3-205ENST00000471440 SCARF1Q14162 830 aa6.76□□□□□ -1.33
CFHR3-205ENST00000471440 MAP7D1Q3KQU3 841 aa6.76□□□□□ -1.33
CFHR3-205ENST00000471440 NFATC2IPQ8NCF5 419 aa6.76□□□□□ -1.33
CFHR3-205ENST00000471440 TRIM52Q96A61 297 aa6.76□□□□□ -1.33
CFHR3-205ENST00000471440 CHMP4AQ9BY43 222 aa6.76□□□□□ -1.33
CFHR3-205ENST00000471440 OSBPL3Q9H4L5 887 aa6.76□□□□□ -1.33
CFHR3-205ENST00000471440 NUP160Q12769 1436 aa6.76□□□□□ -1.33
CFHR3-205ENST00000471440 USP17L5A8MUK1 530 aa6.75□□□□□ -1.33
CFHR3-205ENST00000471440 RECKO95980 971 aa6.75□□□□□ -1.33
CFHR3-205ENST00000471440 MYCP01106 439 aaPredicted RBP6.75□□□□□ -1.33
CFHR3-205ENST00000471440 MARSP56192 900 aaKnown RBP6.75□□□□□ -1.33
CFHR3-205ENST00000471440 NCOA4Q13772 614 aa6.75□□□□□ -1.33
CFHR3-205ENST00000471440 KDF1Q8NAX2 398 aaPredicted RBP6.75□□□□□ -1.33
CFHR3-205ENST00000471440 ESF1Q9H501 851 aaKnown RBP6.75□□□□□ -1.33
CFHR3-205ENST00000471440 FAM196BA6NMK8 535 aa6.74□□□□□ -1.33
CFHR3-205ENST00000471440 USP17L15C9J2P7 530 aa6.74□□□□□ -1.33
CFHR3-205ENST00000471440 USP17L10C9JJH3 530 aa6.74□□□□□ -1.33
CFHR3-205ENST00000471440 USP17L13C9JLJ4 530 aa6.74□□□□□ -1.33
CFHR3-205ENST00000471440 USP17L12C9JPN9 530 aa6.74□□□□□ -1.33
CFHR3-205ENST00000471440 USP17L11C9JVI0 530 aa6.74□□□□□ -1.33
CFHR3-205ENST00000471440 USP17L21D6R901 530 aa6.74□□□□□ -1.33
CFHR3-205ENST00000471440 USP17L18D6R9N7 530 aa6.74□□□□□ -1.33
CFHR3-205ENST00000471440 USP17L22D6RA61 530 aa6.74□□□□□ -1.33
CFHR3-205ENST00000471440 USP17L17D6RBQ6 530 aa6.74□□□□□ -1.33
CFHR3-205ENST00000471440 USP17L19D6RCP7 530 aa6.74□□□□□ -1.33
CFHR3-205ENST00000471440 USP17L20D6RJB6 530 aa6.74□□□□□ -1.33
CFHR3-205ENST00000471440 ATP5J2-PTCD1G3V325 749 aa6.74□□□□□ -1.33
CFHR3-205ENST00000471440 SMARCA5O60264 1052 aaPredicted RBP6.74□□□□□ -1.33
CFHR3-205ENST00000471440 USP17L24Q0WX57 530 aa6.74□□□□□ -1.33
CFHR3-205ENST00000471440 PTK7Q13308 1070 aa6.74□□□□□ -1.33
CFHR3-205ENST00000471440 CYP2U1Q7Z449 544 aa6.74□□□□□ -1.33
CFHR3-205ENST00000471440 ZNF395Q9H8N7 513 aaPredicted RBP6.74□□□□□ -1.33
CFHR3-205ENST00000471440 KIAA0586Q9BVV6 1533 aa6.74□□□□□ -1.33
CFHR3-205ENST00000471440 USP4Q13107 963 aa6.73□□□□□ -1.33
CFHR3-205ENST00000471440 SPINT1O43278 529 aa6.73□□□□□ -1.33
CFHR3-205ENST00000471440 EML3Q32P44 896 aa6.73□□□□□ -1.33
CFHR3-205ENST00000471440 FBXO33Q7Z6M2 555 aa6.73□□□□□ -1.33
CFHR3-205ENST00000471440 CLP1Q92989 425 aaKnown RBP6.73□□□□□ -1.33
CFHR3-205ENST00000471440 INSM2Q96T92 566 aaPredicted RBP6.73□□□□□ -1.33
CFHR3-205ENST00000471440 ARHGEF10LQ9HCE6 1279 aa6.73□□□□□ -1.33
CFHR3-205ENST00000471440 KIF21BO75037 1637 aa6.73□□□□□ -1.33
CFHR3-205ENST00000471440 CEP170Q5SW79 1584 aa6.72□□□□□ -1.33
CFHR3-205ENST00000471440 PTGIRP43119 386 aa6.72□□□□□ -1.33
CFHR3-205ENST00000471440 SREK1Q8WXA9 508 aaKnown RBP6.72□□□□□ -1.33
CFHR3-205ENST00000471440 C8orf37Q96NL8 207 aa6.72□□□□□ -1.33
CFHR3-205ENST00000471440 RAB6BQ9NRW1 208 aa6.72□□□□□ -1.33
CFHR3-205ENST00000471440 CLASP1Q7Z460 1538 aa6.72□□□□□ -1.33
CFHR3-205ENST00000471440 DRC1Q96MC2 740 aa6.71□□□□□ -1.33
CFHR3-205ENST00000471440 MKRN1Q9UHC7 482 aaKnown RBP6.71□□□□□ -1.33
CFHR3-205ENST00000471440 GOLGA3Q08378 1498 aa6.71□□□□□ -1.34
CFHR3-205ENST00000471440 STAU1O95793 577 aaKnown RBP6.71□□□□□ -1.34
CFHR3-205ENST00000471440 CTSOP43234 321 aaPredicted RBP6.71□□□□□ -1.34
CFHR3-205ENST00000471440 PLEKHM2Q8IWE5 1019 aa6.71□□□□□ -1.34
CFHR3-205ENST00000471440 POLMQ9NP87 494 aaPredicted RBP6.71□□□□□ -1.34
CFHR3-205ENST00000471440 A0A1W2PRU2 124 aa6.7□□□□□ -1.34
CFHR3-205ENST00000471440 TTLL8A6PVC2 850 aa6.7□□□□□ -1.34
CFHR3-205ENST00000471440 SOBPA7XYQ1 873 aa6.7□□□□□ -1.34
CFHR3-205ENST00000471440 ATP2B4P23634 1241 aa6.7□□□□□ -1.34
CFHR3-205ENST00000471440 ECM1Q16610 540 aa6.7□□□□□ -1.34
CFHR3-205ENST00000471440 TMEM151AQ8N4L1 468 aa6.7□□□□□ -1.34
CFHR3-205ENST00000471440 NOD1Q9Y239 953 aa6.7□□□□□ -1.34
CFHR3-205ENST00000471440 SOS2Q07890 1332 aaPredicted RBP6.7□□□□□ -1.34
CFHR3-205ENST00000471440 MEN1O00255 615 aa6.69□□□□□ -1.34
CFHR3-205ENST00000471440 GNRH1P01148 92 aa6.69□□□□□ -1.34
CFHR3-205ENST00000471440 VAMP1P23763 118 aa6.69□□□□□ -1.34
CFHR3-205ENST00000471440 BIN2Q9UBW5 565 aaPredicted RBP6.69□□□□□ -1.34
CFHR3-205ENST00000471440 DNMT3LQ9UJW3 386 aa6.69□□□□□ -1.34
CFHR3-205ENST00000471440 LZTS3O60299 673 aaPredicted RBP6.69□□□□□ -1.34
CFHR3-205ENST00000471440 MAN1A2O60476 641 aa6.69□□□□□ -1.34
CFHR3-205ENST00000471440 GTF2IP78347 998 aa6.69□□□□□ -1.34
CFHR3-205ENST00000471440 ERBB4Q15303 1308 aa6.68□□□□□ -1.34
CFHR3-205ENST00000471440 RNF225M0QZC1 329 aaPredicted RBP6.68□□□□□ -1.34
CFHR3-205ENST00000471440 VSIG8P0DPA2 414 aa6.68□□□□□ -1.34
CFHR3-205ENST00000471440 RASA1P20936 1047 aa6.68□□□□□ -1.34
CFHR3-205ENST00000471440 CLDN10P78369 228 aa6.68□□□□□ -1.34
CFHR3-205ENST00000471440 CLN3Q13286 438 aa6.68□□□□□ -1.34
CFHR3-205ENST00000471440 SPATA32Q96LK8 384 aa6.68□□□□□ -1.34
CFHR3-205ENST00000471440 IQGAP2Q13576 1575 aa6.68□□□□□ -1.34
CFHR3-205ENST00000471440 FIGNL2A6NMB9 653 aa6.68□□□□□ -1.34
CFHR3-205ENST00000471440 IL2RAP01589 272 aa6.68□□□□□ -1.34
CFHR3-205ENST00000471440 ZC3H6P61129 1189 aaKnown RBP6.68□□□□□ -1.34
CFHR3-205ENST00000471440 PSME1Q06323 249 aa6.68□□□□□ -1.34
CFHR3-205ENST00000471440 RNF217Q8TC41 542 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms