RNA–Protein interactions for RNA: ENST00000471261.2

PPP1R3F-204, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 3

Gene PPP1R3F, Length 503 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-204ENST00000471261 GOLGB1Q14789 3259 aaKnown RBP16.64■□□□□ 0.25
PPP1R3F-204ENST00000471261 COL24A1Q17RW2 1714 aa16.63■□□□□ 0.25
PPP1R3F-204ENST00000471261 ZPR1O75312 459 aa16.63■□□□□ 0.25
PPP1R3F-204ENST00000471261 GYS1P13807 737 aa16.63■□□□□ 0.25
PPP1R3F-204ENST00000471261 NEUROD2Q15784 382 aa16.63■□□□□ 0.25
PPP1R3F-204ENST00000471261 PELP1Q8IZL8 1130 aaKnown RBP16.63■□□□□ 0.25
PPP1R3F-204ENST00000471261 NLGN2Q8NFZ4 835 aa16.63■□□□□ 0.25
PPP1R3F-204ENST00000471261 ZNF330Q9Y3S2 320 aaPredicted RBP16.63■□□□□ 0.25
PPP1R3F-204ENST00000471261 SIPA1L3O60292 1781 aaPredicted RBP16.63■□□□□ 0.25
PPP1R3F-204ENST00000471261 CICQ96RK0 1608 aaPredicted RBP16.63■□□□□ 0.25
PPP1R3F-204ENST00000471261 UBR2Q8IWV8 1755 aa16.62■□□□□ 0.25
PPP1R3F-204ENST00000471261 TMPOP42166 694 aaKnown RBP16.62■□□□□ 0.25
PPP1R3F-204ENST00000471261 RUNDC1Q96C34 613 aa16.62■□□□□ 0.25
PPP1R3F-204ENST00000471261 SOS1Q07889 1333 aaPredicted RBP16.62■□□□□ 0.25
PPP1R3F-204ENST00000471261 USP42Q9H9J4 1324 aaKnown RBP16.62■□□□□ 0.25
PPP1R3F-204ENST00000471261 ANP32CO43423 234 aa16.61■□□□□ 0.25
PPP1R3F-204ENST00000471261 COL15A1P39059 1388 aa16.61■□□□□ 0.25
PPP1R3F-204ENST00000471261 PRAMEF22A3QJZ6 481 aa16.6■□□□□ 0.25
PPP1R3F-204ENST00000471261 SNRPA1P09661 255 aaKnown RBP16.6■□□□□ 0.25
PPP1R3F-204ENST00000471261 LMOD3Q0VAK6 560 aa16.6■□□□□ 0.25
PPP1R3F-204ENST00000471261 GPR162Q16538 588 aa16.6■□□□□ 0.25
PPP1R3F-204ENST00000471261 USPL1Q5W0Q7 1092 aa16.6■□□□□ 0.25
PPP1R3F-204ENST00000471261 NPM2Q86SE8 214 aaKnown RBP16.6■□□□□ 0.25
PPP1R3F-204ENST00000471261 PNISRQ8TF01 805 aaKnown RBP16.6■□□□□ 0.25
PPP1R3F-204ENST00000471261 CD2APQ9Y5K6 639 aa16.6■□□□□ 0.25
PPP1R3F-204ENST00000471261 A1BGP04217 495 aa16.59■□□□□ 0.25
PPP1R3F-204ENST00000471261 FKBP8Q14318 412 aa16.59■□□□□ 0.25
PPP1R3F-204ENST00000471261 USP16Q9Y5T5 823 aa16.59■□□□□ 0.25
PPP1R3F-204ENST00000471261 PARP3Q9Y6F1 533 aa16.59■□□□□ 0.25
PPP1R3F-204ENST00000471261 C4AP0C0L4 1744 aa16.58■□□□□ 0.24
PPP1R3F-204ENST00000471261 DLG5Q8TDM6 1919 aa16.58■□□□□ 0.24
PPP1R3F-204ENST00000471261 A0A087WZG4 1122 aa16.57■□□□□ 0.24
PPP1R3F-204ENST00000471261 PIP4K2AP48426 406 aaPredicted RBP16.57■□□□□ 0.24
PPP1R3F-204ENST00000471261 NARFQ9UHQ1 456 aa16.57■□□□□ 0.24
PPP1R3F-204ENST00000471261 TSPYL4Q9UJ04 414 aa16.57■□□□□ 0.24
PPP1R3F-204ENST00000471261 EIF5P55010 431 aaKnown RBP16.56■□□□□ 0.24
PPP1R3F-204ENST00000471261 CCDC184Q52MB2 194 aa16.56■□□□□ 0.24
PPP1R3F-204ENST00000471261 WWC3Q9ULE0 1092 aa16.56■□□□□ 0.24
PPP1R3F-204ENST00000471261 IL6STP40189 918 aaPredicted RBP16.55■□□□□ 0.24
PPP1R3F-204ENST00000471261 TBC1D2BQ9UPU7 963 aa16.55■□□□□ 0.24
PPP1R3F-204ENST00000471261 LAS1LQ9Y4W2 734 aaKnown RBP16.55■□□□□ 0.24
PPP1R3F-204ENST00000471261 EIF4A1P60842 406 aaKnown RBP16.54■□□□□ 0.24
PPP1R3F-204ENST00000471261 MRS2Q9HD23 443 aa16.54■□□□□ 0.24
PPP1R3F-204ENST00000471261 DDR1Q08345 913 aa16.53■□□□□ 0.24
PPP1R3F-204ENST00000471261 BICDL1Q6ZP65 573 aa16.53■□□□□ 0.24
PPP1R3F-204ENST00000471261 TRIM35Q9UPQ4 493 aa16.53■□□□□ 0.24
PPP1R3F-204ENST00000471261 POLRMTO00411 1230 aaKnown RBP16.52■□□□□ 0.24
PPP1R3F-204ENST00000471261 APAF1O14727 1248 aa16.52■□□□□ 0.24
PPP1R3F-204ENST00000471261 GIGYF1O75420 1035 aaPredicted RBP16.52■□□□□ 0.24
PPP1R3F-204ENST00000471261 YBX3P16989 372 aaKnown RBP eCLIP16.52■□□□□ 0.24
PPP1R3F-204ENST00000471261 YY1P25490 414 aa16.52■□□□□ 0.24
PPP1R3F-204ENST00000471261 NFIXQ14938 502 aa16.52■□□□□ 0.24
PPP1R3F-204ENST00000471261 BCL2L12Q9HB09 334 aa16.52■□□□□ 0.24
PPP1R3F-204ENST00000471261 TM4SF1P30408 202 aa16.51■□□□□ 0.23
PPP1R3F-204ENST00000471261 DZIP3Q86Y13 1208 aaKnown RBP16.51■□□□□ 0.23
PPP1R3F-204ENST00000471261 SENP3-EIF4A1A0A087X0R7 540 aa16.5■□□□□ 0.23
PPP1R3F-204ENST00000471261 NGEFQ8N5V2 710 aa16.5■□□□□ 0.23
PPP1R3F-204ENST00000471261 C10orf71Q711Q0 1435 aa16.5■□□□□ 0.23
PPP1R3F-204ENST00000471261 A0A0G2JLW4 131 aa16.49■□□□□ 0.23
PPP1R3F-204ENST00000471261 NBPF26B4DH59 902 aa16.49■□□□□ 0.23
PPP1R3F-204ENST00000471261 TGFB2P61812 414 aa16.49■□□□□ 0.23
PPP1R3F-204ENST00000471261 TBC1D9BQ66K14 1250 aa16.49■□□□□ 0.23
PPP1R3F-204ENST00000471261 NBPF10Q6P3W6 841 aaKnown RBP16.49■□□□□ 0.23
PPP1R3F-204ENST00000471261 NBPF15Q8N660 670 aa16.49■□□□□ 0.23
PPP1R3F-204ENST00000471261 BABAM1Q9NWV8 329 aa16.49■□□□□ 0.23
PPP1R3F-204ENST00000471261 KDM3BQ7LBC6 1761 aa16.49■□□□□ 0.23
PPP1R3F-204ENST00000471261 GRIN3BO60391 1043 aa16.48■□□□□ 0.23
PPP1R3F-204ENST00000471261 CAMTA2O94983 1202 aa16.48■□□□□ 0.23
PPP1R3F-204ENST00000471261 MYL6BP14649 208 aa16.48■□□□□ 0.23
PPP1R3F-204ENST00000471261 CHL1O00533 1208 aa16.47■□□□□ 0.23
PPP1R3F-204ENST00000471261 SERPINB2P05120 415 aa16.47■□□□□ 0.23
PPP1R3F-204ENST00000471261 DPEP1P16444 411 aa16.47■□□□□ 0.23
PPP1R3F-204ENST00000471261 EIF2S2P20042 333 aaKnown RBP16.47■□□□□ 0.23
PPP1R3F-204ENST00000471261 PXDNLA1KZ92 1463 aa16.47■□□□□ 0.23
PPP1R3F-204ENST00000471261 NPHP1O15259 732 aa16.46■□□□□ 0.23
PPP1R3F-204ENST00000471261 SETDB2Q96T68 719 aa16.46■□□□□ 0.23
PPP1R3F-204ENST00000471261 ZNF652Q9Y2D9 606 aa16.46■□□□□ 0.23
PPP1R3F-204ENST00000471261 KRT24Q2M2I5 525 aa16.45■□□□□ 0.22
PPP1R3F-204ENST00000471261 NECTIN2Q92692 538 aa16.45■□□□□ 0.22
PPP1R3F-204ENST00000471261 BCS1LQ9Y276 419 aa16.45■□□□□ 0.22
PPP1R3F-204ENST00000471261 CARMIL3Q8ND23 1372 aa16.45■□□□□ 0.22
PPP1R3F-204ENST00000471261 CHRNA5P30532 468 aa16.44■□□□□ 0.22
PPP1R3F-204ENST00000471261 CALD1Q05682 793 aaKnown RBP16.44■□□□□ 0.22
PPP1R3F-204ENST00000471261 CFAP44Q96MT7 982 aa16.44■□□□□ 0.22
PPP1R3F-204ENST00000471261 LAMB4A4D0S4 1761 aa16.43■□□□□ 0.22
PPP1R3F-204ENST00000471261 SCN7AQ01118 1682 aa16.43■□□□□ 0.22
PPP1R3F-204ENST00000471261 CLEC4GQ6UXB4 293 aa16.43■□□□□ 0.22
PPP1R3F-204ENST00000471261 KIF6Q6ZMV9 814 aa16.43■□□□□ 0.22
PPP1R3F-204ENST00000471261 CCDC24Q8N4L8 307 aa16.43■□□□□ 0.22
PPP1R3F-204ENST00000471261 MBIPQ9NS73 344 aa16.43■□□□□ 0.22
PPP1R3F-204ENST00000471261 KIF13BQ9NQT8 1826 aa16.42■□□□□ 0.22
PPP1R3F-204ENST00000471261 FAM9BQ8IZU0 186 aa16.42■□□□□ 0.22
PPP1R3F-204ENST00000471261 CNBD1Q8NA66 436 aa16.42■□□□□ 0.22
PPP1R3F-204ENST00000471261 PIM2Q9P1W9 311 aa16.42■□□□□ 0.22
PPP1R3F-204ENST00000471261 N4BP2Q86UW6 1770 aaPredicted RBP16.41■□□□□ 0.22
PPP1R3F-204ENST00000471261 ANXA1P04083 346 aa16.41■□□□□ 0.22
PPP1R3F-204ENST00000471261 KCNA3P22001 575 aa16.41■□□□□ 0.22
PPP1R3F-204ENST00000471261 GNAI1P63096 354 aa16.41■□□□□ 0.22
PPP1R3F-204ENST00000471261 HLFQ16534 295 aa16.41■□□□□ 0.22
PPP1R3F-204ENST00000471261 TTLL7Q6ZT98 887 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms