RNA–Protein interactions for RNA: ENST00000470359.2

SUPT20H-208, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 5

Gene SUPT20H, Length 792 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-208ENST00000470359 TM4SF1P30408 202 aa26.52■■□□□ 1.84
SUPT20H-208ENST00000470359 COL15A1P39059 1388 aa26.52■■□□□ 1.84
SUPT20H-208ENST00000470359 ARHGAP27Q6ZUM4 889 aa26.52■■□□□ 1.84
SUPT20H-208ENST00000470359 BCL2L12Q9HB09 334 aa26.51■■□□□ 1.83
SUPT20H-208ENST00000470359 NRXN2Q9P2S2 1712 aa26.51■■□□□ 1.83
SUPT20H-208ENST00000470359 IL17REQ8NFR9 667 aa26.49■■□□□ 1.83
SUPT20H-208ENST00000470359 NFIXQ14938 502 aa26.48■■□□□ 1.83
SUPT20H-208ENST00000470359 ZPR1O75312 459 aa26.47■■□□□ 1.83
SUPT20H-208ENST00000470359 CANXP27824 592 aaKnown RBP26.46■■□□□ 1.83
SUPT20H-208ENST00000470359 NARFQ9UHQ1 456 aa26.46■■□□□ 1.83
SUPT20H-208ENST00000470359 CARMIL3Q8ND23 1372 aa26.46■■□□□ 1.83
SUPT20H-208ENST00000470359 ZNF496Q96IT1 587 aaPredicted RBP26.45■■□□□ 1.82
SUPT20H-208ENST00000470359 PIM2Q9P1W9 311 aa26.45■■□□□ 1.82
SUPT20H-208ENST00000470359 DLEC1Q9Y238 1755 aa26.44■■□□□ 1.82
SUPT20H-208ENST00000470359 PHACTR3Q96KR7 559 aa26.44■■□□□ 1.82
SUPT20H-208ENST00000470359 SBF1O95248 1867 aa26.44■■□□□ 1.82
SUPT20H-208ENST00000470359 SCN7AQ01118 1682 aa26.44■■□□□ 1.82
SUPT20H-208ENST00000470359 DALRD3Q5D0E6 543 aaKnown RBP26.43■■□□□ 1.82
SUPT20H-208ENST00000470359 C9orf131Q5VYM1 1079 aa26.43■■□□□ 1.82
SUPT20H-208ENST00000470359 VSIG10Q8N0Z9 540 aa26.43■■□□□ 1.82
SUPT20H-208ENST00000470359 NMRK2Q9NPI5 230 aa26.43■■□□□ 1.82
SUPT20H-208ENST00000470359 GNAT3A8MTJ3 354 aa26.42■■□□□ 1.82
SUPT20H-208ENST00000470359 HSPA6P17066 643 aa26.42■■□□□ 1.82
SUPT20H-208ENST00000470359 KCNQ3O43525 872 aa26.41■■□□□ 1.82
SUPT20H-208ENST00000470359 PRKAR2BP31323 418 aa26.41■■□□□ 1.82
SUPT20H-208ENST00000470359 RSPH6AQ9H0K4 717 aa26.41■■□□□ 1.82
SUPT20H-208ENST00000470359 HEG1Q9ULI3 1381 aa26.41■■□□□ 1.82
SUPT20H-208ENST00000470359 ANKRD31Q8N7Z5 1873 aa26.4■■□□□ 1.82
SUPT20H-208ENST00000470359 ZNF790Q6PG37 636 aa26.4■■□□□ 1.82
SUPT20H-208ENST00000470359 TTC5Q8N0Z6 440 aa26.4■■□□□ 1.82
SUPT20H-208ENST00000470359 GAS2L2Q8NHY3 880 aa26.4■■□□□ 1.82
SUPT20H-208ENST00000470359 CEMIPQ8WUJ3 1361 aa26.39■■□□□ 1.82
SUPT20H-208ENST00000470359 EIF5P55010 431 aaKnown RBP26.39■■□□□ 1.82
SUPT20H-208ENST00000470359 TEFQ10587 303 aa26.39■■□□□ 1.82
SUPT20H-208ENST00000470359 SERPINB2P05120 415 aa26.38■■□□□ 1.81
SUPT20H-208ENST00000470359 BICDL1Q6ZP65 573 aa26.38■■□□□ 1.81
SUPT20H-208ENST00000470359 COL11A2P13942 1736 aaPredicted RBP26.37■■□□□ 1.81
SUPT20H-208ENST00000470359 RASSF7Q02833 373 aa26.37■■□□□ 1.81
SUPT20H-208ENST00000470359 RNF181Q9P0P0 153 aa26.36■■□□□ 1.81
SUPT20H-208ENST00000470359 ZNF330Q9Y3S2 320 aaPredicted RBP26.36■■□□□ 1.81
SUPT20H-208ENST00000470359 PPP2R1AP30153 589 aa26.35■■□□□ 1.81
SUPT20H-208ENST00000470359 PRELPP51888 382 aa26.35■■□□□ 1.81
SUPT20H-208ENST00000470359 TBC1D9BQ66K14 1250 aa26.35■■□□□ 1.81
SUPT20H-208ENST00000470359 STARD3NLO95772 234 aa26.34■■□□□ 1.81
SUPT20H-208ENST00000470359 A1BGP04217 495 aa26.34■■□□□ 1.81
SUPT20H-208ENST00000470359 CCDC24Q8N4L8 307 aa26.34■■□□□ 1.81
SUPT20H-208ENST00000470359 TBC1D2BQ9UPU7 963 aa26.34■■□□□ 1.81
SUPT20H-208ENST00000470359 BCORQ6W2J9 1755 aa26.33■■□□□ 1.81
SUPT20H-208ENST00000470359 PRAMEF22A3QJZ6 481 aa26.33■■□□□ 1.81
SUPT20H-208ENST00000470359 PIP4K2AP48426 406 aaPredicted RBP26.33■■□□□ 1.81
SUPT20H-208ENST00000470359 CCDC88AQ3V6T2 1871 aa26.32■■□□□ 1.8
SUPT20H-208ENST00000470359 CFAP53Q96M91 514 aa26.31■■□□□ 1.8
SUPT20H-208ENST00000470359 MCM10Q7L590 875 aa26.3■■□□□ 1.8
SUPT20H-208ENST00000470359 C2CD5Q86YS7 1000 aa26.3■■□□□ 1.8
SUPT20H-208ENST00000470359 FMNL2Q96PY5 1086 aa26.3■■□□□ 1.8
SUPT20H-208ENST00000470359 TIAM2Q8IVF5 1701 aa26.29■■□□□ 1.8
SUPT20H-208ENST00000470359 BTBD11A6QL63 1104 aa26.29■■□□□ 1.8
SUPT20H-208ENST00000470359 TOMM70O94826 608 aa26.29■■□□□ 1.8
SUPT20H-208ENST00000470359 U2AF1L5P0DN76 240 aaPredicted RBP26.29■■□□□ 1.8
SUPT20H-208ENST00000470359 U2AF1Q01081 240 aaKnown RBP eCLIP26.29■■□□□ 1.8
SUPT20H-208ENST00000470359 DCTN1Q14203 1278 aa26.29■■□□□ 1.8
SUPT20H-208ENST00000470359 USP16Q9Y5T5 823 aa26.28■■□□□ 1.8
SUPT20H-208ENST00000470359 TNRC6CQ9HCJ0 1690 aaKnown RBP26.28■■□□□ 1.8
SUPT20H-208ENST00000470359 A0A087WZG4 1122 aa26.27■■□□□ 1.8
SUPT20H-208ENST00000470359 CAMTA2O94983 1202 aa26.27■■□□□ 1.8
SUPT20H-208ENST00000470359 CACNA1SQ13698 1873 aa26.27■■□□□ 1.8
SUPT20H-208ENST00000470359 IL6STP40189 918 aaPredicted RBP26.26■■□□□ 1.79
SUPT20H-208ENST00000470359 PRR5LQ6MZQ0 368 aa26.26■■□□□ 1.79
SUPT20H-208ENST00000470359 TTLL6Q8N841 843 aa26.25■■□□□ 1.79
SUPT20H-208ENST00000470359 DLG5Q8TDM6 1919 aa26.25■■□□□ 1.79
SUPT20H-208ENST00000470359 WDR90Q96KV7 1748 aa26.25■■□□□ 1.79
SUPT20H-208ENST00000470359 NFKBIEO00221 500 aa26.24■■□□□ 1.79
SUPT20H-208ENST00000470359 TEX13AQ9BXU3 409 aaPredicted RBP26.24■■□□□ 1.79
SUPT20H-208ENST00000470359 RRAGCQ9HB90 399 aa26.24■■□□□ 1.79
SUPT20H-208ENST00000470359 HTRA3P83110 453 aa26.23■■□□□ 1.79
SUPT20H-208ENST00000470359 NUDCQ9Y266 331 aa26.23■■□□□ 1.79
SUPT20H-208ENST00000470359 H0YIN7 160 aa26.22■■□□□ 1.79
SUPT20H-208ENST00000470359 ZNF219Q9P2Y4 722 aaPredicted RBP26.22■■□□□ 1.79
SUPT20H-208ENST00000470359 SLX4Q8IY92 1834 aa26.21■■□□□ 1.79
SUPT20H-208ENST00000470359 FER1L6Q2WGJ9 1857 aa26.21■■□□□ 1.79
SUPT20H-208ENST00000470359 KDM2BQ8NHM5 1336 aa26.2■■□□□ 1.79
SUPT20H-208ENST00000470359 APLP1P51693 650 aa26.2■■□□□ 1.78
SUPT20H-208ENST00000470359 DZIP3Q86Y13 1208 aaKnown RBP26.2■■□□□ 1.78
SUPT20H-208ENST00000470359 RBM46Q8TBY0 533 aaKnown RBP26.2■■□□□ 1.78
SUPT20H-208ENST00000470359 ZNF622Q969S3 477 aaKnown RBP eCLIP26.2■■□□□ 1.78
SUPT20H-208ENST00000470359 LMNB1P20700 586 aa26.19■■□□□ 1.78
SUPT20H-208ENST00000470359 LAMB4A4D0S4 1761 aa26.18■■□□□ 1.78
SUPT20H-208ENST00000470359 NBPF26B4DH59 902 aa26.18■■□□□ 1.78
SUPT20H-208ENST00000470359 NBPF10Q6P3W6 841 aaKnown RBP26.18■■□□□ 1.78
SUPT20H-208ENST00000470359 NBPF15Q8N660 670 aa26.18■■□□□ 1.78
SUPT20H-208ENST00000470359 DNAJC5GQ8N7S2 189 aa26.18■■□□□ 1.78
SUPT20H-208ENST00000470359 RTF1Q92541 710 aaKnown RBP26.18■■□□□ 1.78
SUPT20H-208ENST00000470359 BRIP1Q9BX63 1249 aa26.18■■□□□ 1.78
SUPT20H-208ENST00000470359 MIS18AQ9NYP9 233 aa26.18■■□□□ 1.78
SUPT20H-208ENST00000470359 C21orf2O43822 256 aa26.17■■□□□ 1.78
SUPT20H-208ENST00000470359 ARFGEF2Q9Y6D5 1785 aa26.17■■□□□ 1.78
SUPT20H-208ENST00000470359 KDM3BQ7LBC6 1761 aa26.16■■□□□ 1.78
SUPT20H-208ENST00000470359 C16orf71Q8IYS4 520 aaPredicted RBP26.16■■□□□ 1.78
SUPT20H-208ENST00000470359 CNBD1Q8NA66 436 aa26.16■■□□□ 1.78
SUPT20H-208ENST00000470359 SETDB2Q96T68 719 aa26.16■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 127.5 ms