RNA–Protein interactions for RNA: ENST00000470019.5

PTK7-208, Transcript of protein tyrosine kinase 7 (inactive), humanhuman

TSL 5

Gene PTK7, Length 4,016 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK7-208ENST00000470019 RAB11FIP3O75154 756 aa17.81■□□□□ 0.44
PTK7-208ENST00000470019 SSFA2P28290 1259 aa17.81■□□□□ 0.44
PTK7-208ENST00000470019 CCDC57Q2TAC2 916 aa17.81■□□□□ 0.44
PTK7-208ENST00000470019 KSR2Q6VAB6 950 aa17.81■□□□□ 0.44
PTK7-208ENST00000470019 ZCRB1Q8TBF4 217 aaKnown RBP17.81■□□□□ 0.44
PTK7-208ENST00000470019 JAKMIP1Q96N16 626 aaKnown RBP17.81■□□□□ 0.44
PTK7-208ENST00000470019 DEPDC5O75140 1603 aa17.81■□□□□ 0.44
PTK7-208ENST00000470019 SKOR2Q2VWA4 1001 aaPredicted RBP17.81■□□□□ 0.44
PTK7-208ENST00000470019 KLHDC4Q8TBB5 520 aa17.81■□□□□ 0.44
PTK7-208ENST00000470019 CNNM1Q9NRU3 951 aa17.8■□□□□ 0.44
PTK7-208ENST00000470019 IGSF1Q8N6C5 1336 aa17.8■□□□□ 0.44
PTK7-208ENST00000470019 PRPF40BQ6NWY9 871 aaKnown RBP17.8■□□□□ 0.44
PTK7-208ENST00000470019 ARHGEF10O15013 1369 aa17.8■□□□□ 0.44
PTK7-208ENST00000470019 SIRT2Q8IXJ6 389 aa17.8■□□□□ 0.44
PTK7-208ENST00000470019 GRM8O00222 908 aa17.79■□□□□ 0.44
PTK7-208ENST00000470019 EIF4A1P60842 406 aaKnown RBP17.79■□□□□ 0.44
PTK7-208ENST00000470019 RNF214Q8ND24 703 aa17.79■□□□□ 0.44
PTK7-208ENST00000470019 SYAP1Q96A49 352 aaPredicted RBP17.79■□□□□ 0.44
PTK7-208ENST00000470019 PRAMEF22A3QJZ6 481 aa17.79■□□□□ 0.44
PTK7-208ENST00000470019 ZNF790Q6PG37 636 aa17.79■□□□□ 0.44
PTK7-208ENST00000470019 PNPLA6Q8IY17 1366 aa17.78■□□□□ 0.44
PTK7-208ENST00000470019 CASTP20810 708 aaKnown RBP17.78■□□□□ 0.44
PTK7-208ENST00000470019 TNPO1Q92973 898 aaKnown RBP17.78■□□□□ 0.44
PTK7-208ENST00000470019 ECHDC1Q9NTX5 307 aa17.78■□□□□ 0.44
PTK7-208ENST00000470019 CEP126Q9P2H0 1117 aa17.78■□□□□ 0.44
PTK7-208ENST00000470019 MSNP26038 577 aaKnown RBP17.77■□□□□ 0.44
PTK7-208ENST00000470019 STK11IPQ8N1F8 1099 aa17.77■□□□□ 0.44
PTK7-208ENST00000470019 ZNF496Q96IT1 587 aaPredicted RBP17.77■□□□□ 0.44
PTK7-208ENST00000470019 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.77■□□□□ 0.44
PTK7-208ENST00000470019 FIBPO43427 364 aa17.77■□□□□ 0.43
PTK7-208ENST00000470019 TMEM94Q12767 1356 aa17.76■□□□□ 0.43
PTK7-208ENST00000470019 USP44Q9H0E7 712 aa17.76■□□□□ 0.43
PTK7-208ENST00000470019 DTNBO60941 627 aa17.76■□□□□ 0.43
PTK7-208ENST00000470019 BICDL1Q6ZP65 573 aa17.76■□□□□ 0.43
PTK7-208ENST00000470019 ISY1Q9ULR0 285 aaKnown RBP17.76■□□□□ 0.43
PTK7-208ENST00000470019 CYP46A1Q9Y6A2 500 aa17.76■□□□□ 0.43
PTK7-208ENST00000470019 DIP2BQ9P265 1576 aa17.76■□□□□ 0.43
PTK7-208ENST00000470019 ARHGEF25Q86VW2 580 aa17.76■□□□□ 0.43
PTK7-208ENST00000470019 CDK12Q9NYV4 1490 aaPredicted RBP17.76■□□□□ 0.43
PTK7-208ENST00000470019 STARD3NLO95772 234 aa17.76■□□□□ 0.43
PTK7-208ENST00000470019 VPS37DQ86XT2 251 aa17.76■□□□□ 0.43
PTK7-208ENST00000470019 LINS1Q8NG48 757 aa17.76■□□□□ 0.43
PTK7-208ENST00000470019 SNRKQ9NRH2 765 aa17.76■□□□□ 0.43
PTK7-208ENST00000470019 PROSER3Q2NL68 480 aa17.75■□□□□ 0.43
PTK7-208ENST00000470019 MEX3CQ5U5Q3 659 aaKnown RBP17.75■□□□□ 0.43
PTK7-208ENST00000470019 TCEANC2Q96MN5 208 aa17.75■□□□□ 0.43
PTK7-208ENST00000470019 GSPT1P15170 499 aaKnown RBP17.75■□□□□ 0.43
PTK7-208ENST00000470019 LMBR1LQ6UX01 489 aa17.75■□□□□ 0.43
PTK7-208ENST00000470019 DRC7Q8IY82 874 aa17.75■□□□□ 0.43
PTK7-208ENST00000470019 CPSF1Q10570 1443 aaKnown RBP17.75■□□□□ 0.43
PTK7-208ENST00000470019 RTL1A6NKG5 1358 aa17.74■□□□□ 0.43
PTK7-208ENST00000470019 CPS1P31327 1500 aa17.74■□□□□ 0.43
PTK7-208ENST00000470019 TTC39AQ5SRH9 613 aa17.74■□□□□ 0.43
PTK7-208ENST00000470019 AXIN2Q9Y2T1 843 aa17.74■□□□□ 0.43
PTK7-208ENST00000470019 KIAA0232Q92628 1395 aa17.74■□□□□ 0.43
PTK7-208ENST00000470019 MCM2P49736 904 aa17.74■□□□□ 0.43
PTK7-208ENST00000470019 DDX21Q9NR30 783 aaKnown RBP eCLIP17.74■□□□□ 0.43
PTK7-208ENST00000470019 ATP6V1DQ9Y5K8 247 aa17.74■□□□□ 0.43
PTK7-208ENST00000470019 EXOC5O00471 708 aa17.73■□□□□ 0.43
PTK7-208ENST00000470019 BICC1Q9H694 974 aaKnown RBP17.73■□□□□ 0.43
PTK7-208ENST00000470019 USP16Q9Y5T5 823 aa17.73■□□□□ 0.43
PTK7-208ENST00000470019 ADAMTS13Q76LX8 1427 aa17.73■□□□□ 0.43
PTK7-208ENST00000470019 ACSBG1Q96GR2 724 aa17.73■□□□□ 0.43
PTK7-208ENST00000470019 ESYT1Q9BSJ8 1104 aa17.73■□□□□ 0.43
PTK7-208ENST00000470019 PPFIA3O75145 1194 aa17.73■□□□□ 0.43
PTK7-208ENST00000470019 CCDC158Q5M9N0 1113 aa17.73■□□□□ 0.43
PTK7-208ENST00000470019 DCAF5Q96JK2 942 aa17.73■□□□□ 0.43
PTK7-208ENST00000470019 SOS1Q07889 1333 aaPredicted RBP17.73■□□□□ 0.43
PTK7-208ENST00000470019 SF3A1Q15459 793 aaKnown RBP17.72■□□□□ 0.43
PTK7-208ENST00000470019 LRRC7Q96NW7 1537 aa17.72■□□□□ 0.43
PTK7-208ENST00000470019 PREX1Q8TCU6 1659 aa17.72■□□□□ 0.43
PTK7-208ENST00000470019 CPLX1O14810 134 aa17.72■□□□□ 0.43
PTK7-208ENST00000470019 A1BGP04217 495 aa17.72■□□□□ 0.43
PTK7-208ENST00000470019 PSMA5P28066 241 aa17.72■□□□□ 0.43
PTK7-208ENST00000470019 CCDC83Q8IWF9 413 aa17.72■□□□□ 0.43
PTK7-208ENST00000470019 PDRG1Q9NUG6 133 aa17.72■□□□□ 0.43
PTK7-208ENST00000470019 SLAIN2Q9P270 581 aa17.72■□□□□ 0.43
PTK7-208ENST00000470019 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.72■□□□□ 0.43
PTK7-208ENST00000470019 GIGYF1O75420 1035 aaPredicted RBP17.72■□□□□ 0.43
PTK7-208ENST00000470019 LRRFIP1Q32MZ4 808 aaKnown RBP17.72■□□□□ 0.43
PTK7-208ENST00000470019 BLOC1S2Q6QNY1 142 aa17.72■□□□□ 0.43
PTK7-208ENST00000470019 FERMT3Q86UX7 667 aa17.72■□□□□ 0.43
PTK7-208ENST00000470019 GDPD2Q9HCC8 539 aa17.72■□□□□ 0.43
PTK7-208ENST00000470019 NPHP4O75161 1426 aaPredicted RBP17.71■□□□□ 0.43
PTK7-208ENST00000470019 HIP1O00291 1037 aa17.71■□□□□ 0.43
PTK7-208ENST00000470019 CEBPZQ03701 1054 aaKnown RBP17.71■□□□□ 0.43
PTK7-208ENST00000470019 DDX46Q7L014 1031 aaKnown RBP17.71■□□□□ 0.43
PTK7-208ENST00000470019 BTG4Q9NY30 223 aa17.71■□□□□ 0.43
PTK7-208ENST00000470019 IL2RBP14784 551 aa17.71■□□□□ 0.43
PTK7-208ENST00000470019 KIAA1210Q9ULL0 1709 aa17.71■□□□□ 0.43
PTK7-208ENST00000470019 TRDNQ13061 729 aa17.71■□□□□ 0.43
PTK7-208ENST00000470019 RALYLQ86SE5 291 aaKnown RBP17.7■□□□□ 0.42
PTK7-208ENST00000470019 ALDH1L1O75891 902 aa17.7■□□□□ 0.42
PTK7-208ENST00000470019 CIZ1Q9ULV3 898 aaPredicted RBP17.7■□□□□ 0.42
PTK7-208ENST00000470019 CWC22Q9HCG8 908 aaKnown RBP17.7■□□□□ 0.42
PTK7-208ENST00000470019 TRMT112Q9UI30 125 aaKnown RBP17.7■□□□□ 0.42
PTK7-208ENST00000470019 METTL24Q5JXM2 366 aa17.69■□□□□ 0.42
PTK7-208ENST00000470019 MPHOSPH8Q99549 860 aa17.69■□□□□ 0.42
PTK7-208ENST00000470019 USP26Q9BXU7 913 aa17.69■□□□□ 0.42
PTK7-208ENST00000470019 SLC52A2Q9HAB3 445 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms