RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 TTLL6Q8N841 843 aa26.01■■□□□ 1.75
NCKIPSD-209ENST00000470006 NFIXQ14938 502 aa25.99■■□□□ 1.75
NCKIPSD-209ENST00000470006 SULT6B1Q6IMI4 303 aa25.99■■□□□ 1.75
NCKIPSD-209ENST00000470006 C2CD5Q86YS7 1000 aa25.99■■□□□ 1.75
NCKIPSD-209ENST00000470006 AFDNP55196 1824 aaKnown RBP25.99■■□□□ 1.75
NCKIPSD-209ENST00000470006 SERPINB2P05120 415 aa25.98■■□□□ 1.75
NCKIPSD-209ENST00000470006 SOS1Q07889 1333 aaPredicted RBP25.97■■□□□ 1.75
NCKIPSD-209ENST00000470006 H0YIN7 160 aa25.97■■□□□ 1.75
NCKIPSD-209ENST00000470006 DPY19L2Q6NUT2 758 aa25.97■■□□□ 1.75
NCKIPSD-209ENST00000470006 NARFQ9UHQ1 456 aa25.97■■□□□ 1.75
NCKIPSD-209ENST00000470006 TIAM2Q8IVF5 1701 aa25.96■■□□□ 1.75
NCKIPSD-209ENST00000470006 ADAMTS7Q9UKP4 1686 aa25.95■■□□□ 1.74
NCKIPSD-209ENST00000470006 SCN11AQ9UI33 1791 aa25.95■■□□□ 1.74
NCKIPSD-209ENST00000470006 MORC1Q86VD1 984 aa25.94■■□□□ 1.74
NCKIPSD-209ENST00000470006 COL15A1P39059 1388 aa25.94■■□□□ 1.74
NCKIPSD-209ENST00000470006 CYP19A1P11511 503 aaPredicted RBP25.93■■□□□ 1.74
NCKIPSD-209ENST00000470006 SLC39A6Q13433 755 aa25.93■■□□□ 1.74
NCKIPSD-209ENST00000470006 BICDL1Q6ZP65 573 aa25.93■■□□□ 1.74
NCKIPSD-209ENST00000470006 SLC52A2Q9HAB3 445 aa25.93■■□□□ 1.74
NCKIPSD-209ENST00000470006 ZNF219Q9P2Y4 722 aaPredicted RBP25.93■■□□□ 1.74
NCKIPSD-209ENST00000470006 AKAP4Q5JQC9 854 aa25.92■■□□□ 1.74
NCKIPSD-209ENST00000470006 ZNF622Q969S3 477 aaKnown RBP eCLIP25.92■■□□□ 1.742e-7■■■■■ 28.3
NCKIPSD-209ENST00000470006 PANK3Q9H999 370 aa25.92■■□□□ 1.74
NCKIPSD-209ENST00000470006 DLEC1Q9Y238 1755 aa25.92■■□□□ 1.74
NCKIPSD-209ENST00000470006 NFKBIEO00221 500 aa25.91■■□□□ 1.74
NCKIPSD-209ENST00000470006 LGR6Q9HBX8 967 aa25.91■■□□□ 1.74
NCKIPSD-209ENST00000470006 ZBTB1Q9Y2K1 713 aa25.91■■□□□ 1.74
NCKIPSD-209ENST00000470006 MKRN1Q9UHC7 482 aaKnown RBP25.9■■□□□ 1.74
NCKIPSD-209ENST00000470006 CANXP27824 592 aaKnown RBP25.89■■□□□ 1.74
NCKIPSD-209ENST00000470006 ERFEQ4G0M1 354 aa25.89■■□□□ 1.74
NCKIPSD-209ENST00000470006 NRXN2Q9P2S2 1712 aa25.88■■□□□ 1.73
NCKIPSD-209ENST00000470006 POTECB2RU33 542 aa25.88■■□□□ 1.73
NCKIPSD-209ENST00000470006 BCL2L12Q9HB09 334 aa25.88■■□□□ 1.73
NCKIPSD-209ENST00000470006 C21orf2O43822 256 aa25.87■■□□□ 1.73
NCKIPSD-209ENST00000470006 CARMIL3Q8ND23 1372 aa25.86■■□□□ 1.73
NCKIPSD-209ENST00000470006 RNMTO43148 476 aaKnown RBP25.86■■□□□ 1.73
NCKIPSD-209ENST00000470006 CHADLQ6NUI6 762 aa25.85■■□□□ 1.73
NCKIPSD-209ENST00000470006 CREBZFQ9NS37 354 aa25.85■■□□□ 1.73
NCKIPSD-209ENST00000470006 IL13P35225 146 aa25.84■■□□□ 1.73
NCKIPSD-209ENST00000470006 NPHP1O15259 732 aa25.83■■□□□ 1.73
NCKIPSD-209ENST00000470006 PDE6BP35913 854 aa25.83■■□□□ 1.73
NCKIPSD-209ENST00000470006 ZNF330Q9Y3S2 320 aaPredicted RBP25.83■■□□□ 1.73
NCKIPSD-209ENST00000470006 A0A087WZG4 1122 aa25.82■■□□□ 1.72
NCKIPSD-209ENST00000470006 CCDC24Q8N4L8 307 aa25.82■■□□□ 1.72
NCKIPSD-209ENST00000470006 VIRMAQ69YN4 1812 aaKnown RBP25.81■■□□□ 1.72
NCKIPSD-209ENST00000470006 DICER1Q9UPY3 1922 aaKnown RBP25.81■■□□□ 1.72
NCKIPSD-209ENST00000470006 STARD3NLO95772 234 aa25.81■■□□□ 1.72
NCKIPSD-209ENST00000470006 TTC5Q8N0Z6 440 aa25.81■■□□□ 1.72
NCKIPSD-209ENST00000470006 VSIG10Q8N0Z9 540 aa25.81■■□□□ 1.72
NCKIPSD-209ENST00000470006 PDZRN3Q9UPQ7 1066 aa25.81■■□□□ 1.72
NCKIPSD-209ENST00000470006 HMOX1P09601 288 aa25.8■■□□□ 1.72
NCKIPSD-209ENST00000470006 TBC1D9BQ66K14 1250 aa25.8■■□□□ 1.72
NCKIPSD-209ENST00000470006 BRIP1Q9BX63 1249 aa25.8■■□□□ 1.72
NCKIPSD-209ENST00000470006 TAOK3Q9H2K8 898 aa25.8■■□□□ 1.72
NCKIPSD-209ENST00000470006 DDNO94850 711 aaPredicted RBP25.79■■□□□ 1.72
NCKIPSD-209ENST00000470006 AIDAQ96BJ3 306 aa25.79■■□□□ 1.72
NCKIPSD-209ENST00000470006 FOXN1O15353 648 aa25.78■■□□□ 1.72
NCKIPSD-209ENST00000470006 POTEIP0CG38 1075 aa25.78■■□□□ 1.72
NCKIPSD-209ENST00000470006 POTEJP0CG39 1038 aa25.78■■□□□ 1.72
NCKIPSD-209ENST00000470006 KNSTRNQ9Y448 316 aa25.78■■□□□ 1.72
NCKIPSD-209ENST00000470006 FER1L6Q2WGJ9 1857 aa25.77■■□□□ 1.72
NCKIPSD-209ENST00000470006 ANKRD31Q8N7Z5 1873 aa25.77■■□□□ 1.72
NCKIPSD-209ENST00000470006 NPM2Q86SE8 214 aaKnown RBP25.77■■□□□ 1.72
NCKIPSD-209ENST00000470006 EIF5P55010 431 aaKnown RBP25.76■■□□□ 1.71
NCKIPSD-209ENST00000470006 TBC1D2BQ9UPU7 963 aa25.76■■□□□ 1.71
NCKIPSD-209ENST00000470006 MRC1P22897 1456 aa25.76■■□□□ 1.71
NCKIPSD-209ENST00000470006 PRR5LQ6MZQ0 368 aa25.75■■□□□ 1.71
NCKIPSD-209ENST00000470006 EIF4G2P78344 907 aaKnown RBP eCLIP25.74■■□□□ 1.71
NCKIPSD-209ENST00000470006 MTHFSDQ2M296 383 aaKnown RBP25.74■■□□□ 1.71
NCKIPSD-209ENST00000470006 CNKSR1Q969H4 720 aa25.74■■□□□ 1.71
NCKIPSD-209ENST00000470006 TIMELESSQ9UNS1 1208 aa25.74■■□□□ 1.71
NCKIPSD-209ENST00000470006 CACNA1SQ13698 1873 aa25.74■■□□□ 1.71
NCKIPSD-209ENST00000470006 CNTNAP1P78357 1384 aa25.73■■□□□ 1.71
NCKIPSD-209ENST00000470006 IQCA1LA6NCM1 817 aa25.73■■□□□ 1.71
NCKIPSD-209ENST00000470006 SETDB2Q96T68 719 aa25.73■■□□□ 1.71
NCKIPSD-209ENST00000470006 COL11A2P13942 1736 aaPredicted RBP25.72■■□□□ 1.71
NCKIPSD-209ENST00000470006 LTBP3Q9NS15 1303 aa25.72■■□□□ 1.71
NCKIPSD-209ENST00000470006 CTCFP49711 727 aaPredicted RBP25.72■■□□□ 1.71
NCKIPSD-209ENST00000470006 ST5P78524 1137 aa25.72■■□□□ 1.71
NCKIPSD-209ENST00000470006 CNBD1Q8NA66 436 aa25.72■■□□□ 1.71
NCKIPSD-209ENST00000470006 PRDM10Q9NQV6 1147 aa25.72■■□□□ 1.71
NCKIPSD-209ENST00000470006 HSPA5P11021 654 aaKnown RBP25.71■■□□□ 1.71
NCKIPSD-209ENST00000470006 SOGA3Q5TF21 947 aa25.71■■□□□ 1.71
NCKIPSD-209ENST00000470006 LDHDQ86WU2 507 aa25.71■■□□□ 1.71
NCKIPSD-209ENST00000470006 CLEC11AQ9Y240 323 aa25.71■■□□□ 1.71
NCKIPSD-209ENST00000470006 EAPPQ56P03 285 aaPredicted RBP25.7■■□□□ 1.7
NCKIPSD-209ENST00000470006 PRPF40BQ6NWY9 871 aaKnown RBP25.7■■□□□ 1.7
NCKIPSD-209ENST00000470006 TEX13AQ9BXU3 409 aaPredicted RBP25.7■■□□□ 1.7
NCKIPSD-209ENST00000470006 SLX4Q8IY92 1834 aa25.7■■□□□ 1.7
NCKIPSD-209ENST00000470006 TMEM88BA6NKF7 163 aa25.69■■□□□ 1.7
NCKIPSD-209ENST00000470006 VEGFBP49765 207 aa25.69■■□□□ 1.7
NCKIPSD-209ENST00000470006 TEFQ10587 303 aa25.69■■□□□ 1.7
NCKIPSD-209ENST00000470006 STYK1Q6J9G0 422 aa25.69■■□□□ 1.7
NCKIPSD-209ENST00000470006 UBR2Q8IWV8 1755 aa25.69■■□□□ 1.7
NCKIPSD-209ENST00000470006 MASTLQ96GX5 879 aa25.68■■□□□ 1.7
NCKIPSD-209ENST00000470006 ZNF496Q96IT1 587 aaPredicted RBP25.68■■□□□ 1.7
NCKIPSD-209ENST00000470006 TAF1DQ9H5J8 278 aaPredicted RBP25.68■■□□□ 1.7
NCKIPSD-209ENST00000470006 PASKQ96RG2 1323 aa25.67■■□□□ 1.7
NCKIPSD-209ENST00000470006 SRGNP10124 158 aa25.66■■□□□ 1.7
NCKIPSD-209ENST00000470006 IL6STP40189 918 aaPredicted RBP25.66■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms