RNA–Protein interactions for RNA: ENST00000469123.5

SSBP1-208, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 5

Gene SSBP1, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-208ENST00000469123 COL24A1Q17RW2 1714 aa11.15□□□□□ -0.62
SSBP1-208ENST00000469123 SOS1Q07889 1333 aaPredicted RBP11.15□□□□□ -0.62
SSBP1-208ENST00000469123 IL16Q14005 1332 aa11.15□□□□□ -0.62
SSBP1-208ENST00000469123 ERBB4Q15303 1308 aa11.15□□□□□ -0.62
SSBP1-208ENST00000469123 A0A087WZG4 1122 aa11.15□□□□□ -0.62
SSBP1-208ENST00000469123 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.15□□□□□ -0.62
SSBP1-208ENST00000469123 HOXB7P09629 217 aa11.15□□□□□ -0.62
SSBP1-208ENST00000469123 TRAPPC3LQ5T215 181 aa11.15□□□□□ -0.62
SSBP1-208ENST00000469123 THUMPD2Q9BTF0 503 aaKnown RBP11.15□□□□□ -0.62
SSBP1-208ENST00000469123 EIF4A1P60842 406 aaKnown RBP11.14□□□□□ -0.63
SSBP1-208ENST00000469123 RGL2O15211 777 aa11.13□□□□□ -0.63
SSBP1-208ENST00000469123 MSH5O43196 834 aa11.13□□□□□ -0.63
SSBP1-208ENST00000469123 GIGYF1O75420 1035 aaPredicted RBP11.13□□□□□ -0.63
SSBP1-208ENST00000469123 ZNF853P0CG23 659 aa11.13□□□□□ -0.63
SSBP1-208ENST00000469123 POLD1P28340 1107 aa11.13□□□□□ -0.63
SSBP1-208ENST00000469123 RFC4P35249 363 aa11.13□□□□□ -0.63
SSBP1-208ENST00000469123 IL6STP40189 918 aaPredicted RBP11.13□□□□□ -0.63
SSBP1-208ENST00000469123 INTS5Q6P9B9 1019 aaKnown RBP11.13□□□□□ -0.63
SSBP1-208ENST00000469123 COL23A1Q86Y22 540 aaPredicted RBP11.13□□□□□ -0.63
SSBP1-208ENST00000469123 WDR63Q8IWG1 891 aa11.13□□□□□ -0.63
SSBP1-208ENST00000469123 WWC1Q8IX03 1113 aa11.13□□□□□ -0.63
SSBP1-208ENST00000469123 KCNQ3O43525 872 aa11.12□□□□□ -0.63
SSBP1-208ENST00000469123 PHF14O94880 888 aa11.12□□□□□ -0.63
SSBP1-208ENST00000469123 COL15A1P39059 1388 aa11.12□□□□□ -0.63
SSBP1-208ENST00000469123 C4AP0C0L4 1744 aa11.12□□□□□ -0.63
SSBP1-208ENST00000469123 ZPR1O75312 459 aa11.11□□□□□ -0.63
SSBP1-208ENST00000469123 ZBTB7AO95365 584 aa11.11□□□□□ -0.63
SSBP1-208ENST00000469123 EIF5P55010 431 aaKnown RBP11.11□□□□□ -0.63
SSBP1-208ENST00000469123 NLGN1Q8N2Q7 840 aa11.11□□□□□ -0.63
SSBP1-208ENST00000469123 ARHGEF1Q92888 912 aaKnown RBP11.11□□□□□ -0.63
SSBP1-208ENST00000469123 MIS18AQ9NYP9 233 aa11.11□□□□□ -0.63
SSBP1-208ENST00000469123 ZBTB1Q9Y2K1 713 aa11.11□□□□□ -0.63
SSBP1-208ENST00000469123 LAS1LQ9Y4W2 734 aaKnown RBP11.11□□□□□ -0.63
SSBP1-208ENST00000469123 MIER1Q8N108 512 aa11.1□□□□□ -0.63
SSBP1-208ENST00000469123 MBIPQ9NS73 344 aa11.1□□□□□ -0.63
SSBP1-208ENST00000469123 PPP1R1BQ9UD71 204 aaPredicted RBP11.1□□□□□ -0.63
SSBP1-208ENST00000469123 USP16Q9Y5T5 823 aa11.1□□□□□ -0.63
SSBP1-208ENST00000469123 CACNA1FO60840 1977 aa11.1□□□□□ -0.63
SSBP1-208ENST00000469123 USP42Q9H9J4 1324 aaKnown RBP11.09□□□□□ -0.63
SSBP1-208ENST00000469123 CANXP27824 592 aaKnown RBP11.09□□□□□ -0.63
SSBP1-208ENST00000469123 SGIP1Q9BQI5 828 aa11.09□□□□□ -0.63
SSBP1-208ENST00000469123 PDGFDQ9GZP0 370 aaPredicted RBP11.09□□□□□ -0.63
SSBP1-208ENST00000469123 MYH16Q9H6N6 1097 aa11.09□□□□□ -0.63
SSBP1-208ENST00000469123 NARFQ9UHQ1 456 aa11.09□□□□□ -0.63
SSBP1-208ENST00000469123 A1BGP04217 495 aa11.08□□□□□ -0.64
SSBP1-208ENST00000469123 PTGER2P43116 358 aa11.08□□□□□ -0.64
SSBP1-208ENST00000469123 CLEC4GQ6UXB4 293 aa11.08□□□□□ -0.64
SSBP1-208ENST00000469123 ARXQ96QS3 562 aa11.08□□□□□ -0.64
SSBP1-208ENST00000469123 ATF5Q9Y2D1 282 aaPredicted RBP11.08□□□□□ -0.64
SSBP1-208ENST00000469123 ZNF652Q9Y2D9 606 aa11.08□□□□□ -0.64
SSBP1-208ENST00000469123 SCN7AQ01118 1682 aa11.08□□□□□ -0.64
SSBP1-208ENST00000469123 GYS1P13807 737 aa11.07□□□□□ -0.64
SSBP1-208ENST00000469123 AMIGO3Q86WK7 504 aa11.07□□□□□ -0.64
SSBP1-208ENST00000469123 ZNF521Q96K83 1311 aa11.07□□□□□ -0.64
SSBP1-208ENST00000469123 BCORQ6W2J9 1755 aa11.06□□□□□ -0.64
SSBP1-208ENST00000469123 PRAMEF22A3QJZ6 481 aa11.06□□□□□ -0.64
SSBP1-208ENST00000469123 GOLGA2Q08379 1002 aa11.06□□□□□ -0.64
SSBP1-208ENST00000469123 HDGFL1Q5TGJ6 251 aa11.06□□□□□ -0.64
SSBP1-208ENST00000469123 DUSP27Q5VZP5 1158 aa11.06□□□□□ -0.64
SSBP1-208ENST00000469123 DZIP3Q86Y13 1208 aaKnown RBP11.06□□□□□ -0.64
SSBP1-208ENST00000469123 DBF4Q9UBU7 674 aaPredicted RBP11.06□□□□□ -0.64
SSBP1-208ENST00000469123 ERVV-1B6SEH8 477 aa11.05□□□□□ -0.64
SSBP1-208ENST00000469123 E9PSI1 815 aa11.05□□□□□ -0.64
SSBP1-208ENST00000469123 CCDC30Q5VVM6 783 aa11.05□□□□□ -0.64
SSBP1-208ENST00000469123 USPL1Q5W0Q7 1092 aa11.05□□□□□ -0.64
SSBP1-208ENST00000469123 KIF6Q6ZMV9 814 aa11.05□□□□□ -0.64
SSBP1-208ENST00000469123 POTEDQ86YR6 584 aa11.05□□□□□ -0.64
SSBP1-208ENST00000469123 DDX21Q9NR30 783 aaKnown RBP eCLIP11.05□□□□□ -0.64
SSBP1-208ENST00000469123 ZNF330Q9Y3S2 320 aaPredicted RBP11.05□□□□□ -0.64
SSBP1-208ENST00000469123 PARP3Q9Y6F1 533 aa11.05□□□□□ -0.64
SSBP1-208ENST00000469123 NBPF26B4DH59 902 aa11.04□□□□□ -0.64
SSBP1-208ENST00000469123 MMP10P09238 476 aa11.04□□□□□ -0.64
SSBP1-208ENST00000469123 EIF2S2P20042 333 aaKnown RBP11.04□□□□□ -0.64
SSBP1-208ENST00000469123 MSL1Q68DK7 614 aa11.04□□□□□ -0.64
SSBP1-208ENST00000469123 NBPF10Q6P3W6 841 aaKnown RBP11.04□□□□□ -0.64
SSBP1-208ENST00000469123 NBPF15Q8N660 670 aa11.04□□□□□ -0.64
SSBP1-208ENST00000469123 HYPKQ9NX55 129 aa11.04□□□□□ -0.64
SSBP1-208ENST00000469123 CD2APQ9Y5K6 639 aa11.04□□□□□ -0.64
SSBP1-208ENST00000469123 FANCIQ9NVI1 1328 aa11.04□□□□□ -0.64
SSBP1-208ENST00000469123 CAMTA2O94983 1202 aa11.03□□□□□ -0.64
SSBP1-208ENST00000469123 STK31Q9BXU1 1019 aa11.03□□□□□ -0.64
SSBP1-208ENST00000469123 SRP68Q9UHB9 627 aaKnown RBP11.03□□□□□ -0.64
SSBP1-208ENST00000469123 SALL2Q9Y467 1007 aaPredicted RBP11.03□□□□□ -0.64
SSBP1-208ENST00000469123 MAP3K15Q6ZN16 1313 aa11.03□□□□□ -0.64
SSBP1-208ENST00000469123 CARMIL3Q8ND23 1372 aa11.03□□□□□ -0.64
SSBP1-208ENST00000469123 KIF13BQ9NQT8 1826 aa11.02□□□□□ -0.64
SSBP1-208ENST00000469123 TM4SF1P30408 202 aa11.02□□□□□ -0.65
SSBP1-208ENST00000469123 FKBP8Q14318 412 aa11.02□□□□□ -0.65
SSBP1-208ENST00000469123 TWISTNBQ3B726 338 aaPredicted RBP11.02□□□□□ -0.65
SSBP1-208ENST00000469123 HSP90AB3PQ58FF7 597 aa11.02□□□□□ -0.65
SSBP1-208ENST00000469123 SMIM5Q71RC9 77 aa11.02□□□□□ -0.65
SSBP1-208ENST00000469123 TSR2Q969E8 191 aaKnown RBP11.02□□□□□ -0.65
SSBP1-208ENST00000469123 ZNF428Q96B54 188 aa11.02□□□□□ -0.65
SSBP1-208ENST00000469123 TBC1D2BQ9UPU7 963 aa11.02□□□□□ -0.65
SSBP1-208ENST00000469123 NUP98P52948 1817 aa11.02□□□□□ -0.65
SSBP1-208ENST00000469123 ATP10DQ9P241 1426 aa11.01□□□□□ -0.65
SSBP1-208ENST00000469123 NRXN2Q9P2S2 1712 aa11.01□□□□□ -0.65
SSBP1-208ENST00000469123 DCAF8L1A6NGE4 600 aa11.01□□□□□ -0.65
SSBP1-208ENST00000469123 POLRMTO00411 1230 aaKnown RBP11.01□□□□□ -0.65
SSBP1-208ENST00000469123 CT47B1P0C2W7 299 aaPredicted RBP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms