RNA–Protein interactions for RNA: ENST00000467468.5

SMC4-208, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 4

Gene SMC4, Length 566 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-208ENST00000467468 AIDAQ96BJ3 306 aa7.67□□□□□ -1.18
SMC4-208ENST00000467468 ZNF837Q96EG3 531 aaPredicted RBP7.67□□□□□ -1.18
SMC4-208ENST00000467468 TRERF1Q96PN7 1200 aa7.67□□□□□ -1.18
SMC4-208ENST00000467468 GPAMQ9HCL2 828 aa7.67□□□□□ -1.18
SMC4-208ENST00000467468 SFI1A8K8P3 1242 aa7.66□□□□□ -1.18
SMC4-208ENST00000467468 MSX1P28360 303 aa7.66□□□□□ -1.18
SMC4-208ENST00000467468 EPHA4P54764 986 aa7.66□□□□□ -1.18
SMC4-208ENST00000467468 FOXK2Q01167 660 aa7.66□□□□□ -1.18
SMC4-208ENST00000467468 DPYDQ12882 1025 aa7.66□□□□□ -1.18
SMC4-208ENST00000467468 ARID3AQ99856 593 aa7.66□□□□□ -1.18
SMC4-208ENST00000467468 ZDHHC3Q9NYG2 299 aa7.66□□□□□ -1.18
SMC4-208ENST00000467468 PSMA6P60900 246 aaKnown RBP7.65□□□□□ -1.18
SMC4-208ENST00000467468 TEAD4Q15561 434 aa7.65□□□□□ -1.18
SMC4-208ENST00000467468 LCE2CQ5TA81 110 aa7.65□□□□□ -1.18
SMC4-208ENST00000467468 TSEN2Q8NCE0 465 aaKnown RBP7.65□□□□□ -1.18
SMC4-208ENST00000467468 CUEDC1Q9NWM3 386 aaPredicted RBP7.65□□□□□ -1.18
SMC4-208ENST00000467468 ZNF232Q9UNY5 417 aa7.65□□□□□ -1.18
SMC4-208ENST00000467468 SERTM1A2A2V5 107 aa7.64□□□□□ -1.19
SMC4-208ENST00000467468 DKK1O94907 266 aa7.64□□□□□ -1.19
SMC4-208ENST00000467468 DBN1Q16643 649 aa7.64□□□□□ -1.19
SMC4-208ENST00000467468 GAS2L2Q8NHY3 880 aa7.64□□□□□ -1.19
SMC4-208ENST00000467468 FAM200AQ8TCP9 573 aa7.64□□□□□ -1.19
SMC4-208ENST00000467468 HINFPQ9BQA5 517 aa7.64□□□□□ -1.19
SMC4-208ENST00000467468 COL25A1Q9BXS0 654 aaPredicted RBP7.64□□□□□ -1.19
SMC4-208ENST00000467468 RUBCNLQ9H714 662 aa7.64□□□□□ -1.19
SMC4-208ENST00000467468 PHF24Q9UPV7 400 aa7.64□□□□□ -1.19
SMC4-208ENST00000467468 CDCA8Q53HL2 280 aa7.63□□□□□ -1.19
SMC4-208ENST00000467468 ARSJQ5FYB0 599 aaPredicted RBP7.63□□□□□ -1.19
SMC4-208ENST00000467468 FIGNL1Q6PIW4 674 aa7.63□□□□□ -1.19
SMC4-208ENST00000467468 ZNF295-AS1Q8N0V1 137 aa7.63□□□□□ -1.19
SMC4-208ENST00000467468 CCDC82Q8N4S0 544 aa7.63□□□□□ -1.19
SMC4-208ENST00000467468 L3MBTL2Q969R5 705 aa7.63□□□□□ -1.19
SMC4-208ENST00000467468 GTPBP3Q969Y2 492 aaKnown RBP7.63□□□□□ -1.19
SMC4-208ENST00000467468 PBXIP1Q96AQ6 731 aa7.63□□□□□ -1.19
SMC4-208ENST00000467468 TSPAN10Q9H1Z9 355 aaPredicted RBP7.63□□□□□ -1.19
SMC4-208ENST00000467468 CRISPLD1Q9H336 500 aa7.63□□□□□ -1.19
SMC4-208ENST00000467468 NOVA2Q9UNW9 492 aaKnown RBP7.63□□□□□ -1.19
SMC4-208ENST00000467468 USP3Q9Y6I4 520 aa7.63□□□□□ -1.19
SMC4-208ENST00000467468 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.62□□□□□ -1.19
SMC4-208ENST00000467468 PPP1R12BO60237 982 aaPredicted RBP7.62□□□□□ -1.19
SMC4-208ENST00000467468 ATP4AP20648 1035 aa7.62□□□□□ -1.19
SMC4-208ENST00000467468 NOS2P35228 1153 aa7.62□□□□□ -1.19
SMC4-208ENST00000467468 ELOAQ14241 798 aaKnown RBP7.62□□□□□ -1.19
SMC4-208ENST00000467468 TBCELQ5QJ74 424 aa7.62□□□□□ -1.19
SMC4-208ENST00000467468 BICDL1Q6ZP65 573 aa7.62□□□□□ -1.19
SMC4-208ENST00000467468 GPR161Q8N6U8 529 aaKnown RBP7.62□□□□□ -1.19
SMC4-208ENST00000467468 PODXL2Q9NZ53 605 aa7.62□□□□□ -1.19
SMC4-208ENST00000467468 GPC6Q9Y625 555 aaPredicted RBP7.62□□□□□ -1.19
SMC4-208ENST00000467468 GJA3Q9Y6H8 435 aa7.62□□□□□ -1.19
SMC4-208ENST00000467468 NLRP8Q86W28 1048 aa7.61□□□□□ -1.19
SMC4-208ENST00000467468 CNTNAP3BQ96NU0 1288 aa7.61□□□□□ -1.19
SMC4-208ENST00000467468 CNTNAP3Q9BZ76 1288 aa7.61□□□□□ -1.19
SMC4-208ENST00000467468 NSFL1CQ9UNZ2 370 aaKnown RBP7.61□□□□□ -1.19
SMC4-208ENST00000467468 PARP3Q9Y6F1 533 aa7.61□□□□□ -1.19
SMC4-208ENST00000467468 ATAD2Q6PL18 1390 aa7.6□□□□□ -1.19
SMC4-208ENST00000467468 ATG7O95352 703 aa7.6□□□□□ -1.19
SMC4-208ENST00000467468 HIRAP54198 1017 aaPredicted RBP7.6□□□□□ -1.19
SMC4-208ENST00000467468 STAG2Q8N3U4 1231 aa7.6□□□□□ -1.19
SMC4-208ENST00000467468 ZDHHC1Q8WTX9 485 aa7.6□□□□□ -1.19
SMC4-208ENST00000467468 SCG3Q8WXD2 468 aaKnown RBP7.6□□□□□ -1.19
SMC4-208ENST00000467468 CFHR5Q9BXR6 569 aa7.6□□□□□ -1.19
SMC4-208ENST00000467468 NEUROD4Q9HD90 331 aa7.6□□□□□ -1.19
SMC4-208ENST00000467468 FAM181BA6NEQ2 426 aa7.59□□□□□ -1.19
SMC4-208ENST00000467468 EML1O00423 815 aa7.59□□□□□ -1.19
SMC4-208ENST00000467468 IGFBP4P22692 258 aa7.59□□□□□ -1.19
SMC4-208ENST00000467468 SWI5Q1ZZU3 235 aa7.59□□□□□ -1.19
SMC4-208ENST00000467468 C1orf53Q5VUE5 145 aa7.59□□□□□ -1.19
SMC4-208ENST00000467468 CHMP7Q8WUX9 453 aaPredicted RBP7.59□□□□□ -1.19
SMC4-208ENST00000467468 MBIPQ9NS73 344 aa7.59□□□□□ -1.19
SMC4-208ENST00000467468 ACIN1Q9UKV3 1341 aaKnown RBP7.58□□□□□ -1.2
SMC4-208ENST00000467468 A0A1W2PNR3 127 aa7.58□□□□□ -1.2
SMC4-208ENST00000467468 GPR25O00155 361 aa7.58□□□□□ -1.2
SMC4-208ENST00000467468 PPP1R15AO75807 674 aaPredicted RBP7.58□□□□□ -1.2
SMC4-208ENST00000467468 TXLNAP40222 546 aa7.58□□□□□ -1.2
SMC4-208ENST00000467468 HIF1AQ16665 826 aa7.58□□□□□ -1.2
SMC4-208ENST00000467468 ZSCAN1Q8NBB4 408 aa7.58□□□□□ -1.2
SMC4-208ENST00000467468 RHPN1Q8TCX5 695 aa7.58□□□□□ -1.2
SMC4-208ENST00000467468 VTI1AQ96AJ9 217 aa7.58□□□□□ -1.2
SMC4-208ENST00000467468 ATXN7L1Q9ULK2 861 aaPredicted RBP7.58□□□□□ -1.2
SMC4-208ENST00000467468 MX2P20592 715 aa7.57□□□□□ -1.2
SMC4-208ENST00000467468 SRPK2P78362 688 aaKnown RBP7.57□□□□□ -1.2
SMC4-208ENST00000467468 KRT76Q01546 638 aa7.57□□□□□ -1.2
SMC4-208ENST00000467468 SRSF11Q05519 484 aaKnown RBP7.57□□□□□ -1.2
SMC4-208ENST00000467468 TRIM26Q12899 539 aaPredicted RBP7.57□□□□□ -1.2
SMC4-208ENST00000467468 RNFT1Q5M7Z0 435 aa7.57□□□□□ -1.2
SMC4-208ENST00000467468 PCDHGC4Q9Y5F7 938 aa7.57□□□□□ -1.2
SMC4-208ENST00000467468 ATXN7O15265 892 aaPredicted RBP7.56□□□□□ -1.2
SMC4-208ENST00000467468 FOXO3O43524 673 aa7.56□□□□□ -1.2
SMC4-208ENST00000467468 C21orf2O43822 256 aa7.56□□□□□ -1.2
SMC4-208ENST00000467468 GAS6Q14393 721 aa7.56□□□□□ -1.2
SMC4-208ENST00000467468 POTEAQ6S8J7 498 aa7.56□□□□□ -1.2
SMC4-208ENST00000467468 ZIC5Q96T25 663 aa7.56□□□□□ -1.2
SMC4-208ENST00000467468 C2orf49Q9BVC5 232 aaPredicted RBP7.56□□□□□ -1.2
SMC4-208ENST00000467468 PHACTR1Q9C0D0 580 aa7.56□□□□□ -1.2
SMC4-208ENST00000467468 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.56□□□□□ -1.22e-6■■■■■ 539.2
SMC4-208ENST00000467468 ANKIB1Q9P2G1 1089 aa7.56□□□□□ -1.2
SMC4-208ENST00000467468 STK17AQ9UEE5 414 aa7.56□□□□□ -1.2
SMC4-208ENST00000467468 ZMIZ1Q9ULJ6 1067 aa7.56□□□□□ -1.2
SMC4-208ENST00000467468 THBS1P07996 1170 aa7.55□□□□□ -1.2
SMC4-208ENST00000467468 MAP2K3P46734 347 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms