RNA–Protein interactions for RNA: ENST00000467378.1

USP11-205, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 696 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-205ENST00000467378 PNNQ9H307 717 aaKnown RBP25.35■■□□□ 1.65
USP11-205ENST00000467378 MRS2Q9HD23 443 aa25.35■■□□□ 1.65
USP11-205ENST00000467378 ATG3Q9NT62 314 aa25.35■■□□□ 1.65
USP11-205ENST00000467378 DLG5Q8TDM6 1919 aa25.35■■□□□ 1.65
USP11-205ENST00000467378 C1orf141Q5JVX7 400 aa25.34■■□□□ 1.65
USP11-205ENST00000467378 ARHGEF1Q92888 912 aaKnown RBP25.34■■□□□ 1.65
USP11-205ENST00000467378 PIM2Q9P1W9 311 aa25.34■■□□□ 1.65
USP11-205ENST00000467378 HSP90AB1P08238 724 aaKnown RBP25.33■■□□□ 1.65
USP11-205ENST00000467378 GYS1P13807 737 aa25.33■■□□□ 1.65
USP11-205ENST00000467378 KCNA3P22001 575 aa25.33■■□□□ 1.65
USP11-205ENST00000467378 RFC4P35249 363 aa25.33■■□□□ 1.65
USP11-205ENST00000467378 GAS2L2Q8NHY3 880 aa25.33■■□□□ 1.65
USP11-205ENST00000467378 ZNF831Q5JPB2 1677 aa25.32■■□□□ 1.64
USP11-205ENST00000467378 SMC1BQ8NDV3 1235 aa25.32■■□□□ 1.64
USP11-205ENST00000467378 PNISRQ8TF01 805 aaKnown RBP25.32■■□□□ 1.64
USP11-205ENST00000467378 RBM42Q9BTD8 480 aaKnown RBP25.32■■□□□ 1.64
USP11-205ENST00000467378 ADAMTS7Q9UKP4 1686 aa25.32■■□□□ 1.64
USP11-205ENST00000467378 KDM6AO15550 1401 aaPredicted RBP25.31■■□□□ 1.64
USP11-205ENST00000467378 ADRA2BP18089 450 aa25.31■■□□□ 1.64
USP11-205ENST00000467378 DALRD3Q5D0E6 543 aaKnown RBP25.31■■□□□ 1.64
USP11-205ENST00000467378 DCAF5Q96JK2 942 aa25.31■■□□□ 1.64
USP11-205ENST00000467378 MYH14Q7Z406 1995 aaKnown RBP25.31■■□□□ 1.64
USP11-205ENST00000467378 NEFMP07197 916 aa25.28■■□□□ 1.64
USP11-205ENST00000467378 HSPA1AP0DMV8 641 aaKnown RBP25.28■■□□□ 1.64
USP11-205ENST00000467378 HSPA1BP0DMV9 641 aaKnown RBP25.28■■□□□ 1.64
USP11-205ENST00000467378 RC3H1Q5TC82 1133 aaKnown RBP25.28■■□□□ 1.64
USP11-205ENST00000467378 RPS6KA4O75676 772 aa25.27■■□□□ 1.64
USP11-205ENST00000467378 SLC4A9Q96Q91 983 aa25.27■■□□□ 1.64
USP11-205ENST00000467378 LGR6Q9HBX8 967 aa25.27■■□□□ 1.64
USP11-205ENST00000467378 CCDC88AQ3V6T2 1871 aa25.26■■□□□ 1.63
USP11-205ENST00000467378 GNAT3A8MTJ3 354 aa25.26■■□□□ 1.63
USP11-205ENST00000467378 ERVV-2B6SEH9 535 aa25.26■■□□□ 1.63
USP11-205ENST00000467378 CCDC146Q8IYE0 955 aa25.26■■□□□ 1.63
USP11-205ENST00000467378 RUNDC1Q96C34 613 aa25.26■■□□□ 1.63
USP11-205ENST00000467378 MAPK8IP3Q9UPT6 1336 aa25.26■■□□□ 1.63
USP11-205ENST00000467378 CCER2I3L3R5 266 aa25.25■■□□□ 1.63
USP11-205ENST00000467378 RNMTO43148 476 aaKnown RBP25.25■■□□□ 1.63
USP11-205ENST00000467378 CNTNAP4Q9C0A0 1308 aa25.25■■□□□ 1.63
USP11-205ENST00000467378 MIER1Q8N108 512 aa25.24■■□□□ 1.63
USP11-205ENST00000467378 CHRNA5P30532 468 aa25.23■■□□□ 1.63
USP11-205ENST00000467378 NFE2L2Q16236 605 aa25.23■■□□□ 1.63
USP11-205ENST00000467378 IL17REQ8NFR9 667 aa25.23■■□□□ 1.63
USP11-205ENST00000467378 SIPA1L3O60292 1781 aaPredicted RBP25.22■■□□□ 1.63
USP11-205ENST00000467378 PCNTO95613 3336 aa25.21■■□□□ 1.63
USP11-205ENST00000467378 HTATSF1O43719 755 aaKnown RBP25.2■■□□□ 1.62
USP11-205ENST00000467378 CABP4P57796 275 aa25.2■■□□□ 1.62
USP11-205ENST00000467378 SRP68Q9UHB9 627 aaKnown RBP25.2■■□□□ 1.62
USP11-205ENST00000467378 MRC1P22897 1456 aa25.2■■□□□ 1.62
USP11-205ENST00000467378 TMPOP42166 694 aaKnown RBP25.19■■□□□ 1.62
USP11-205ENST00000467378 FKBP8Q14318 412 aa25.19■■□□□ 1.62
USP11-205ENST00000467378 NFATC2IPQ8NCF5 419 aa25.19■■□□□ 1.62
USP11-205ENST00000467378 CEMIPQ8WUJ3 1361 aa25.18■■□□□ 1.62
USP11-205ENST00000467378 TIAM2Q8IVF5 1701 aa25.18■■□□□ 1.62
USP11-205ENST00000467378 VEGFAP15692 232 aaPredicted RBP25.18■■□□□ 1.62
USP11-205ENST00000467378 RASSF7Q02833 373 aa25.18■■□□□ 1.62
USP11-205ENST00000467378 DDR1Q08345 913 aa25.18■■□□□ 1.62
USP11-205ENST00000467378 SLC52A2Q9HAB3 445 aa25.18■■□□□ 1.62
USP11-205ENST00000467378 RIPK4P57078 832 aa25.17■■□□□ 1.62
USP11-205ENST00000467378 FAM9BQ8IZU0 186 aa25.17■■□□□ 1.62
USP11-205ENST00000467378 RTF1Q92541 710 aaKnown RBP25.17■■□□□ 1.62
USP11-205ENST00000467378 ZC3H4Q9UPT8 1303 aaKnown RBP25.16■■□□□ 1.62
USP11-205ENST00000467378 MCM10Q7L590 875 aa25.16■■□□□ 1.62
USP11-205ENST00000467378 USP42Q9H9J4 1324 aaKnown RBP25.15■■□□□ 1.62
USP11-205ENST00000467378 AFDNP55196 1824 aaKnown RBP25.15■■□□□ 1.62
USP11-205ENST00000467378 DCTN1Q14203 1278 aa25.15■■□□□ 1.62
USP11-205ENST00000467378 GLTPD2A6NH11 291 aa25.14■■□□□ 1.62
USP11-205ENST00000467378 APAF1O14727 1248 aa25.14■■□□□ 1.62
USP11-205ENST00000467378 PTCD1O75127 700 aaKnown RBP25.14■■□□□ 1.62
USP11-205ENST00000467378 CRKLP46109 303 aaKnown RBP25.14■■□□□ 1.62
USP11-205ENST00000467378 RRP7AQ9Y3A4 280 aaKnown RBP25.14■■□□□ 1.62
USP11-205ENST00000467378 TJP1Q07157 1748 aa25.13■■□□□ 1.61
USP11-205ENST00000467378 LMNB1P20700 586 aa25.12■■□□□ 1.61
USP11-205ENST00000467378 TEFQ10587 303 aa25.12■■□□□ 1.61
USP11-205ENST00000467378 NEUROD2Q15784 382 aa25.12■■□□□ 1.61
USP11-205ENST00000467378 DLEC1Q9Y238 1755 aa25.12■■□□□ 1.61
USP11-205ENST00000467378 POLRMTO00411 1230 aaKnown RBP25.11■■□□□ 1.61
USP11-205ENST00000467378 TRIM35Q9UPQ4 493 aa25.11■■□□□ 1.61
USP11-205ENST00000467378 UBR2Q8IWV8 1755 aa25.08■■□□□ 1.61
USP11-205ENST00000467378 TM4SF1P30408 202 aa25.08■■□□□ 1.61
USP11-205ENST00000467378 LMOD3Q0VAK6 560 aa25.08■■□□□ 1.61
USP11-205ENST00000467378 ZPR1O75312 459 aa25.07■■□□□ 1.6
USP11-205ENST00000467378 THUMPD2Q9BTF0 503 aaKnown RBP25.07■■□□□ 1.6
USP11-205ENST00000467378 SLC39A6Q13433 755 aa25.06■■□□□ 1.6
USP11-205ENST00000467378 DICER1Q9UPY3 1922 aaKnown RBP25.06■■□□□ 1.6
USP11-205ENST00000467378 TAF7Q15545 349 aaPredicted RBP25.05■■□□□ 1.6
USP11-205ENST00000467378 USPL1Q5W0Q7 1092 aa25.05■■□□□ 1.6
USP11-205ENST00000467378 KDM3BQ7LBC6 1761 aa25.04■■□□□ 1.6
USP11-205ENST00000467378 MKRN1Q9UHC7 482 aaKnown RBP25.04■■□□□ 1.6
USP11-205ENST00000467378 NRXN2Q9P2S2 1712 aa25.03■■□□□ 1.6
USP11-205ENST00000467378 BTBD11A6QL63 1104 aa25.03■■□□□ 1.6
USP11-205ENST00000467378 NCBP3Q53F19 620 aaKnown RBP25.03■■□□□ 1.6
USP11-205ENST00000467378 TTLL6Q8N841 843 aa25.03■■□□□ 1.6
USP11-205ENST00000467378 DPY19L2Q6NUT2 758 aa25.02■■□□□ 1.6
USP11-205ENST00000467378 INTS5Q6P9B9 1019 aaKnown RBP25.02■■□□□ 1.6
USP11-205ENST00000467378 POTECB2RU33 542 aa25.01■■□□□ 1.59
USP11-205ENST00000467378 ZNF790Q6PG37 636 aa25.01■■□□□ 1.59
USP11-205ENST00000467378 KCNQ3O43525 872 aa25■■□□□ 1.59
USP11-205ENST00000467378 CCDC27Q2M243 656 aa25■■□□□ 1.59
USP11-205ENST00000467378 CREBZFQ9NS37 354 aa25■■□□□ 1.59
USP11-205ENST00000467378 NFIXQ14938 502 aa24.99■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 97.7 ms