RNA–Protein interactions for RNA: ENST00000467353.1

CPS1-205, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 3

Gene CPS1, Length 323 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-205ENST00000467353 KAT6BQ8WYB5 2073 aa6.11□□□□□ -1.43
CPS1-205ENST00000467353 KIAA1210Q9ULL0 1709 aa6.11□□□□□ -1.43
CPS1-205ENST00000467353 RASSF10A6NK89 507 aa6.11□□□□□ -1.43
CPS1-205ENST00000467353 DDNO94850 711 aaPredicted RBP6.11□□□□□ -1.43
CPS1-205ENST00000467353 TATP17735 454 aaPredicted RBP6.11□□□□□ -1.43
CPS1-205ENST00000467353 AMPHP49418 695 aa6.11□□□□□ -1.43
CPS1-205ENST00000467353 NKX1-1Q15270 411 aaPredicted RBP6.11□□□□□ -1.43
CPS1-205ENST00000467353 DCAF8Q5TAQ9 597 aa6.11□□□□□ -1.43
CPS1-205ENST00000467353 ATG3Q9NT62 314 aa6.11□□□□□ -1.43
CPS1-205ENST00000467353 WDR70Q9NW82 654 aa6.11□□□□□ -1.43
CPS1-205ENST00000467353 SRP68Q9UHB9 627 aaKnown RBP6.11□□□□□ -1.43
CPS1-205ENST00000467353 TSKSQ9UJT2 592 aa6.11□□□□□ -1.43
CPS1-205ENST00000467353 TNRC6CQ9HCJ0 1690 aaKnown RBP6.1□□□□□ -1.43
CPS1-205ENST00000467353 PCDH11XQ9BZA7 1347 aa6.1□□□□□ -1.43
CPS1-205ENST00000467353 PCDH11YQ9BZA8 1340 aa6.1□□□□□ -1.43
CPS1-205ENST00000467353 GTPBP6O43824 516 aaPredicted RBP6.1□□□□□ -1.43
CPS1-205ENST00000467353 RPS6KA4O75676 772 aa6.1□□□□□ -1.43
CPS1-205ENST00000467353 TM4SF1P30408 202 aa6.1□□□□□ -1.43
CPS1-205ENST00000467353 RC3H1Q5TC82 1133 aaKnown RBP6.1□□□□□ -1.43
CPS1-205ENST00000467353 PRPF38BQ5VTL8 546 aaKnown RBP6.1□□□□□ -1.43
CPS1-205ENST00000467353 SLC12A5Q9H2X9 1139 aa6.1□□□□□ -1.43
CPS1-205ENST00000467353 CD163L1Q9NR16 1453 aa6.09□□□□□ -1.43
CPS1-205ENST00000467353 KIF13BQ9NQT8 1826 aa6.09□□□□□ -1.43
CPS1-205ENST00000467353 PKD1L3Q7Z443 1732 aa6.09□□□□□ -1.43
CPS1-205ENST00000467353 POLRMTO00411 1230 aaKnown RBP6.09□□□□□ -1.43
CPS1-205ENST00000467353 ERFEQ4G0M1 354 aa6.09□□□□□ -1.43
CPS1-205ENST00000467353 LDHDQ86WU2 507 aa6.09□□□□□ -1.43
CPS1-205ENST00000467353 TAF1DQ9H5J8 278 aaPredicted RBP6.09□□□□□ -1.43
CPS1-205ENST00000467353 TMOD3Q9NYL9 352 aa6.09□□□□□ -1.43
CPS1-205ENST00000467353 UBR3Q6ZT12 1888 aa6.09□□□□□ -1.44
CPS1-205ENST00000467353 SOX10P56693 466 aa6.08□□□□□ -1.44
CPS1-205ENST00000467353 DGKZQ13574 1117 aa6.08□□□□□ -1.44
CPS1-205ENST00000467353 TTLL6Q8N841 843 aa6.08□□□□□ -1.44
CPS1-205ENST00000467353 TMC1Q8TDI8 760 aa6.08□□□□□ -1.44
CPS1-205ENST00000467353 RNF25Q96BH1 459 aaPredicted RBP6.08□□□□□ -1.44
CPS1-205ENST00000467353 CAPNS2Q96L46 248 aa6.08□□□□□ -1.44
CPS1-205ENST00000467353 GPR101Q96P66 508 aaPredicted RBP6.08□□□□□ -1.44
CPS1-205ENST00000467353 RBM42Q9BTD8 480 aaKnown RBP6.08□□□□□ -1.44
CPS1-205ENST00000467353 BEGAINQ9BUH8 593 aa6.08□□□□□ -1.44
CPS1-205ENST00000467353 ABT1Q9ULW3 272 aaKnown RBP6.08□□□□□ -1.44
CPS1-205ENST00000467353 FMR1Q06787 632 aaKnown RBP eCLIP6.07□□□□□ -1.44
CPS1-205ENST00000467353 GRM1Q13255 1194 aa6.07□□□□□ -1.44
CPS1-205ENST00000467353 RRS1Q15050 365 aaKnown RBP6.07□□□□□ -1.44
CPS1-205ENST00000467353 HSP90AB2PQ58FF8 381 aa6.07□□□□□ -1.44
CPS1-205ENST00000467353 MAP1SQ66K74 1059 aaPredicted RBP6.07□□□□□ -1.44
CPS1-205ENST00000467353 CYP4F22Q6NT55 531 aa6.07□□□□□ -1.44
CPS1-205ENST00000467353 HDGFL2Q7Z4V5 671 aaPredicted RBP6.07□□□□□ -1.44
CPS1-205ENST00000467353 C2CD5Q86YS7 1000 aa6.07□□□□□ -1.44
CPS1-205ENST00000467353 CNTROBQ8N137 903 aa6.07□□□□□ -1.44
CPS1-205ENST00000467353 CLEC11AQ9Y240 323 aa6.07□□□□□ -1.44
CPS1-205ENST00000467353 C4AP0C0L4 1744 aa6.07□□□□□ -1.44
CPS1-205ENST00000467353 FAM208AQ9UK61 1670 aaKnown RBP6.07□□□□□ -1.44
CPS1-205ENST00000467353 TAF1LQ8IZX4 1826 aa6.06□□□□□ -1.44
CPS1-205ENST00000467353 CNTNAP4Q9C0A0 1308 aa6.06□□□□□ -1.44
CPS1-205ENST00000467353 USP42Q9H9J4 1324 aaKnown RBP6.06□□□□□ -1.44
CPS1-205ENST00000467353 C21orf2O43822 256 aa6.06□□□□□ -1.44
CPS1-205ENST00000467353 AOC2O75106 756 aa6.06□□□□□ -1.44
CPS1-205ENST00000467353 EAPPQ56P03 285 aaPredicted RBP6.06□□□□□ -1.44
CPS1-205ENST00000467353 COG3Q96JB2 828 aa6.06□□□□□ -1.44
CPS1-205ENST00000467353 L3MBTL3Q96JM7 780 aaPredicted RBP6.06□□□□□ -1.44
CPS1-205ENST00000467353 STK24Q9Y6E0 443 aa6.06□□□□□ -1.44
CPS1-205ENST00000467353 IQCA1LA6NCM1 817 aa6.05□□□□□ -1.44
CPS1-205ENST00000467353 H0YIN7 160 aa6.05□□□□□ -1.44
CPS1-205ENST00000467353 NFIXQ14938 502 aa6.05□□□□□ -1.44
CPS1-205ENST00000467353 USPL1Q5W0Q7 1092 aa6.05□□□□□ -1.44
CPS1-205ENST00000467353 CST9Q5W186 159 aa6.05□□□□□ -1.44
CPS1-205ENST00000467353 INTS5Q6P9B9 1019 aaKnown RBP6.05□□□□□ -1.44
CPS1-205ENST00000467353 DDX21Q9NR30 783 aaKnown RBP eCLIP6.05□□□□□ -1.44
CPS1-205ENST00000467353 TERF2IPQ9NYB0 399 aa6.05□□□□□ -1.44
CPS1-205ENST00000467353 SPG7Q9UQ90 795 aa6.05□□□□□ -1.44
CPS1-205ENST00000467353 EDC4Q6P2E9 1401 aaKnown RBP6.05□□□□□ -1.44
CPS1-205ENST00000467353 KDRP35968 1356 aa6.05□□□□□ -1.44
CPS1-205ENST00000467353 RAB3GAP2Q9H2M9 1393 aa6.05□□□□□ -1.44
CPS1-205ENST00000467353 BRCA1P38398 1863 aaKnown RBP6.05□□□□□ -1.44
CPS1-205ENST00000467353 ARFGEF1Q9Y6D6 1849 aa6.04□□□□□ -1.44
CPS1-205ENST00000467353 PHKG2P15735 406 aa6.04□□□□□ -1.44
CPS1-205ENST00000467353 EPHX2P34913 555 aa6.04□□□□□ -1.44
CPS1-205ENST00000467353 MAP2K2P36507 400 aa6.04□□□□□ -1.44
CPS1-205ENST00000467353 ECE1P42892 770 aa6.04□□□□□ -1.44
CPS1-205ENST00000467353 CRKLP46109 303 aaKnown RBP6.04□□□□□ -1.44
CPS1-205ENST00000467353 HABP4Q5JVS0 413 aaKnown RBP6.04□□□□□ -1.44
CPS1-205ENST00000467353 SBF1O95248 1867 aa6.04□□□□□ -1.44
CPS1-205ENST00000467353 MAP2P11137 1827 aaKnown RBP6.04□□□□□ -1.44
CPS1-205ENST00000467353 LTN1O94822 1766 aa6.03□□□□□ -1.44
CPS1-205ENST00000467353 CA12O43570 354 aa6.03□□□□□ -1.44
CPS1-205ENST00000467353 PTCD1O75127 700 aaKnown RBP6.03□□□□□ -1.44
CPS1-205ENST00000467353 SERPINB2P05120 415 aa6.03□□□□□ -1.44
CPS1-205ENST00000467353 DSG3P32926 999 aa6.03□□□□□ -1.44
CPS1-205ENST00000467353 PNMA8AQ86V59 439 aaPredicted RBP6.03□□□□□ -1.44
CPS1-205ENST00000467353 ZNF622Q969S3 477 aaKnown RBP eCLIP6.03□□□□□ -1.44
CPS1-205ENST00000467353 HACL1Q9UJ83 578 aa6.03□□□□□ -1.44
CPS1-205ENST00000467353 A0A1W2PP64 1363 aa6.03□□□□□ -1.44
CPS1-205ENST00000467353 INSRP06213 1382 aa6.03□□□□□ -1.44
CPS1-205ENST00000467353 ZNF541Q9H0D2 1346 aa6.02□□□□□ -1.45
CPS1-205ENST00000467353 LTBP3Q9NS15 1303 aa6.02□□□□□ -1.45
CPS1-205ENST00000467353 TRAF5O00463 557 aa6.02□□□□□ -1.45
CPS1-205ENST00000467353 FYB1O15117 783 aa6.02□□□□□ -1.45
CPS1-205ENST00000467353 ZPR1O75312 459 aa6.02□□□□□ -1.45
CPS1-205ENST00000467353 NUBP1P53384 320 aa6.02□□□□□ -1.45
CPS1-205ENST00000467353 IFNL2Q8IZJ0 200 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms