RNA–Protein interactions for RNA: ENST00000467263.1

SMC4-207, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-207ENST00000467263 PCDHGA11Q9Y5H2 935 aa9.19□□□□□ -0.94
SMC4-207ENST00000467263 DCDC2BA2VCK2 349 aa9.18□□□□□ -0.94
SMC4-207ENST00000467263 NEURL1BA8MQ27 555 aa9.18□□□□□ -0.94
SMC4-207ENST00000467263 EPXP11678 715 aa9.18□□□□□ -0.94
SMC4-207ENST00000467263 SIRT1Q96EB6 747 aa9.18□□□□□ -0.94
SMC4-207ENST00000467263 BTBD6Q96KE9 485 aa9.18□□□□□ -0.94
SMC4-207ENST00000467263 NIFKQ9BYG3 293 aaKnown RBP9.18□□□□□ -0.94
SMC4-207ENST00000467263 PCDHGC4Q9Y5F7 938 aa9.18□□□□□ -0.94
SMC4-207ENST00000467263 PARP3Q9Y6F1 533 aa9.18□□□□□ -0.94
SMC4-207ENST00000467263 A0A1W2PNR3 127 aa9.17□□□□□ -0.94
SMC4-207ENST00000467263 CD33P20138 364 aa9.17□□□□□ -0.94
SMC4-207ENST00000467263 SEMA3FQ13275 785 aa9.17□□□□□ -0.94
SMC4-207ENST00000467263 MAP7D1Q3KQU3 841 aa9.17□□□□□ -0.94
SMC4-207ENST00000467263 SLC4A9Q96Q91 983 aa9.17□□□□□ -0.94
SMC4-207ENST00000467263 A6NJY4 79 aa9.16□□□□□ -0.94
SMC4-207ENST00000467263 ATXN7O15265 892 aaPredicted RBP9.16□□□□□ -0.94
SMC4-207ENST00000467263 MAPTP10636 758 aaKnown RBP9.16□□□□□ -0.94
SMC4-207ENST00000467263 AMPD1P23109 780 aa9.16□□□□□ -0.94
SMC4-207ENST00000467263 TNP2Q05952 138 aa9.16□□□□□ -0.94
SMC4-207ENST00000467263 GRIN2CQ14957 1233 aa9.16□□□□□ -0.94
SMC4-207ENST00000467263 MTFR1Q15390 333 aa9.16□□□□□ -0.94
SMC4-207ENST00000467263 WASHC4Q2M389 1173 aa9.16□□□□□ -0.94
SMC4-207ENST00000467263 COG6Q9Y2V7 657 aa9.16□□□□□ -0.94
SMC4-207ENST00000467263 ARSJQ5FYB0 599 aaPredicted RBP9.15□□□□□ -0.94
SMC4-207ENST00000467263 NLRP8Q86W28 1048 aa9.15□□□□□ -0.94
SMC4-207ENST00000467263 ZIC5Q96T25 663 aa9.15□□□□□ -0.94
SMC4-207ENST00000467263 STRN4Q9NRL3 753 aa9.15□□□□□ -0.94
SMC4-207ENST00000467263 CDK2AP1O14519 115 aa9.14□□□□□ -0.95
SMC4-207ENST00000467263 ARAFP10398 606 aa9.14□□□□□ -0.95
SMC4-207ENST00000467263 FIGNL1Q6PIW4 674 aa9.14□□□□□ -0.95
SMC4-207ENST00000467263 FCHSD1Q86WN1 690 aa9.14□□□□□ -0.95
SMC4-207ENST00000467263 C1orf216Q8TAB5 229 aa9.14□□□□□ -0.95
SMC4-207ENST00000467263 POM121Q96HA1 1249 aa9.14□□□□□ -0.95
SMC4-207ENST00000467263 KHNYNO15037 678 aaKnown RBP9.13□□□□□ -0.95
SMC4-207ENST00000467263 TXLNAP40222 546 aa9.13□□□□□ -0.95
SMC4-207ENST00000467263 DGKGP49619 791 aa9.13□□□□□ -0.95
SMC4-207ENST00000467263 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.13□□□□□ -0.95
SMC4-207ENST00000467263 ZDHHC1Q8WTX9 485 aa9.13□□□□□ -0.95
SMC4-207ENST00000467263 CABP1Q9NZU7 370 aa9.13□□□□□ -0.95
SMC4-207ENST00000467263 BAG6P46379 1132 aa9.12□□□□□ -0.95
SMC4-207ENST00000467263 PCBP4P57723 403 aaKnown RBP9.12□□□□□ -0.95
SMC4-207ENST00000467263 FURINP09958 794 aa9.11□□□□□ -0.95
SMC4-207ENST00000467263 SKIP12755 728 aa9.11□□□□□ -0.95
SMC4-207ENST00000467263 TBCELQ5QJ74 424 aa9.11□□□□□ -0.95
SMC4-207ENST00000467263 DEPDC4Q8N2C3 294 aa9.11□□□□□ -0.95
SMC4-207ENST00000467263 ALG2Q9H553 416 aa9.11□□□□□ -0.95
SMC4-207ENST00000467263 C1QTNF9BB2RNN3 333 aa9.1□□□□□ -0.95
SMC4-207ENST00000467263 GTF2IP78347 998 aa9.1□□□□□ -0.95
SMC4-207ENST00000467263 NCOA4Q13772 614 aa9.1□□□□□ -0.95
SMC4-207ENST00000467263 NBPF1Q3BBV0 1214 aa9.1□□□□□ -0.95
SMC4-207ENST00000467263 XP32Q5T750 250 aa9.1□□□□□ -0.95
SMC4-207ENST00000467263 CHSY3Q70JA7 882 aa9.1□□□□□ -0.95
SMC4-207ENST00000467263 ZNF358Q9NW07 568 aa9.1□□□□□ -0.95
SMC4-207ENST00000467263 SOX11P35716 441 aa9.09□□□□□ -0.95
SMC4-207ENST00000467263 CHRNA4P43681 627 aa9.09□□□□□ -0.95
SMC4-207ENST00000467263 FAM182BQ5T319 152 aa9.09□□□□□ -0.95
SMC4-207ENST00000467263 SH3PXD2AQ5TCZ1 1133 aa9.09□□□□□ -0.95
SMC4-207ENST00000467263 CD163Q86VB7 1156 aa9.09□□□□□ -0.95
SMC4-207ENST00000467263 ZDHHC3Q9NYG2 299 aa9.09□□□□□ -0.95
SMC4-207ENST00000467263 SCHIP1Q9P0W5 487 aaPredicted RBP9.09□□□□□ -0.95
SMC4-207ENST00000467263 K7ELQ4 463 aaPredicted RBP9.08□□□□□ -0.96
SMC4-207ENST00000467263 GNB5O14775 395 aa9.08□□□□□ -0.96
SMC4-207ENST00000467263 EPHA4P54764 986 aa9.08□□□□□ -0.96
SMC4-207ENST00000467263 EML3Q32P44 896 aa9.08□□□□□ -0.96
SMC4-207ENST00000467263 ADAMTS19Q8TE59 1207 aa9.08□□□□□ -0.96
SMC4-207ENST00000467263 C7orf43Q8WVR3 580 aa9.08□□□□□ -0.96
SMC4-207ENST00000467263 EFSO43281 561 aa9.07□□□□□ -0.96
SMC4-207ENST00000467263 FAM157BP0CG42 384 aa9.07□□□□□ -0.96
SMC4-207ENST00000467263 TATP17735 454 aaPredicted RBP9.07□□□□□ -0.96
SMC4-207ENST00000467263 ADH6P28332 368 aa9.07□□□□□ -0.96
SMC4-207ENST00000467263 TNS4Q8IZW8 715 aa9.07□□□□□ -0.96
SMC4-207ENST00000467263 L3MBTL2Q969R5 705 aa9.07□□□□□ -0.96
SMC4-207ENST00000467263 TRIM11Q96F44 468 aa9.07□□□□□ -0.96
SMC4-207ENST00000467263 NOD1Q9Y239 953 aa9.07□□□□□ -0.96
SMC4-207ENST00000467263 POM121CA8CG34 1229 aa9.06□□□□□ -0.96
SMC4-207ENST00000467263 BICDL1Q6ZP65 573 aa9.06□□□□□ -0.96
SMC4-207ENST00000467263 KIAA1024Q9UPX6 916 aa9.06□□□□□ -0.96
SMC4-207ENST00000467263 PSME1Q06323 249 aa9.05□□□□□ -0.96
SMC4-207ENST00000467263 ZNF468Q5VIY5 522 aaPredicted RBP9.05□□□□□ -0.96
SMC4-207ENST00000467263 LRRC69Q6ZNQ3 347 aa9.05□□□□□ -0.96
SMC4-207ENST00000467263 SLC9A9Q8IVB4 645 aa9.05□□□□□ -0.96
SMC4-207ENST00000467263 USP17L5A8MUK1 530 aa9.04□□□□□ -0.96
SMC4-207ENST00000467263 NOS2P35228 1153 aa9.04□□□□□ -0.96
SMC4-207ENST00000467263 SAMD5Q5TGI4 173 aa9.04□□□□□ -0.96
SMC4-207ENST00000467263 ALYREFQ86V81 257 aaKnown RBP9.04□□□□□ -0.96
SMC4-207ENST00000467263 MARK1Q9P0L2 795 aa9.04□□□□□ -0.96
SMC4-207ENST00000467263 GJA3Q9Y6H8 435 aa9.04□□□□□ -0.96
SMC4-207ENST00000467263 EML1O00423 815 aa9.03□□□□□ -0.96
SMC4-207ENST00000467263 BACH1O14867 736 aa9.03□□□□□ -0.96
SMC4-207ENST00000467263 ZBTB7BO15156 539 aaPredicted RBP9.03□□□□□ -0.96
SMC4-207ENST00000467263 ITGB7P26010 798 aa9.03□□□□□ -0.96
SMC4-207ENST00000467263 MDFIQ99750 246 aa9.03□□□□□ -0.96
SMC4-207ENST00000467263 AVENQ9NQS1 362 aaPredicted RBP9.03□□□□□ -0.96
SMC4-207ENST00000467263 PRR12Q9ULL5 1215 aa9.03□□□□□ -0.96
SMC4-207ENST00000467263 SFSWAPQ12872 951 aaKnown RBP9.02□□□□□ -0.97
SMC4-207ENST00000467263 TEAD4Q15561 434 aa9.02□□□□□ -0.97
SMC4-207ENST00000467263 NFATC2IPQ8NCF5 419 aa9.02□□□□□ -0.97
SMC4-207ENST00000467263 SLC30A3Q99726 388 aa9.02□□□□□ -0.97
SMC4-207ENST00000467263 CLDN10P78369 228 aa9.01□□□□□ -0.97
SMC4-207ENST00000467263 SYT9Q86SS6 491 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms