RNA–Protein interactions for RNA: ENST00000465559.5

FDPS-205, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 3

Gene FDPS, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-205ENST00000465559 PRAMEF22A3QJZ6 481 aa20.33■□□□□ 0.85
FDPS-205ENST00000465559 SNRPA1P09661 255 aaKnown RBP20.33■□□□□ 0.85
FDPS-205ENST00000465559 WWC1Q8IX03 1113 aa20.33■□□□□ 0.85
FDPS-205ENST00000465559 SGIP1Q9BQI5 828 aa20.33■□□□□ 0.85
FDPS-205ENST00000465559 MTFR1LQ9H019 292 aa20.33■□□□□ 0.85
FDPS-205ENST00000465559 CCDC87Q9NVE4 849 aa20.33■□□□□ 0.85
FDPS-205ENST00000465559 TSPYL4Q9UJ04 414 aa20.33■□□□□ 0.85
FDPS-205ENST00000465559 RTCBQ9Y3I0 505 aaKnown RBP20.33■□□□□ 0.85
FDPS-205ENST00000465559 USP16Q9Y5T5 823 aa20.33■□□□□ 0.85
FDPS-205ENST00000465559 GIGYF1O75420 1035 aaPredicted RBP20.32■□□□□ 0.84
FDPS-205ENST00000465559 STARD3NLO95772 234 aa20.32■□□□□ 0.84
FDPS-205ENST00000465559 ADRA2BP18089 450 aa20.32■□□□□ 0.84
FDPS-205ENST00000465559 NGEFQ8N5V2 710 aa20.32■□□□□ 0.84
FDPS-205ENST00000465559 ZBTB1Q9Y2K1 713 aa20.32■□□□□ 0.84
FDPS-205ENST00000465559 SOS1Q07889 1333 aaPredicted RBP20.31■□□□□ 0.84
FDPS-205ENST00000465559 PTGER2P43116 358 aa20.31■□□□□ 0.84
FDPS-205ENST00000465559 ZBTB7AO95365 584 aa20.3■□□□□ 0.84
FDPS-205ENST00000465559 ARHGEF1Q92888 912 aaKnown RBP20.3■□□□□ 0.84
FDPS-205ENST00000465559 SPON1Q9HCB6 807 aa20.3■□□□□ 0.84
FDPS-205ENST00000465559 IFT57Q9NWB7 429 aa20.3■□□□□ 0.84
FDPS-205ENST00000465559 SENP3-EIF4A1A0A087X0R7 540 aa20.29■□□□□ 0.84
FDPS-205ENST00000465559 CALD1Q05682 793 aaKnown RBP20.29■□□□□ 0.84
FDPS-205ENST00000465559 TRAPPC3LQ5T215 181 aa20.29■□□□□ 0.84
FDPS-205ENST00000465559 PHF14O94880 888 aa20.28■□□□□ 0.84
FDPS-205ENST00000465559 EIF5P55010 431 aaKnown RBP20.28■□□□□ 0.84
FDPS-205ENST00000465559 MBIPQ9NS73 344 aa20.28■□□□□ 0.84
FDPS-205ENST00000465559 IL16Q14005 1332 aa20.27■□□□□ 0.84
FDPS-205ENST00000465559 ZNF521Q96K83 1311 aa20.27■□□□□ 0.84
FDPS-205ENST00000465559 A1BGP04217 495 aa20.27■□□□□ 0.84
FDPS-205ENST00000465559 GNAI1P63096 354 aa20.27■□□□□ 0.84
FDPS-205ENST00000465559 ATF5Q9Y2D1 282 aaPredicted RBP20.27■□□□□ 0.84
FDPS-205ENST00000465559 WDR63Q8IWG1 891 aa20.26■□□□□ 0.83
FDPS-205ENST00000465559 COL15A1P39059 1388 aa20.25■□□□□ 0.83
FDPS-205ENST00000465559 NBPF26B4DH59 902 aa20.25■□□□□ 0.83
FDPS-205ENST00000465559 IL6STP40189 918 aaPredicted RBP20.25■□□□□ 0.83
FDPS-205ENST00000465559 NBPF10Q6P3W6 841 aaKnown RBP20.25■□□□□ 0.83
FDPS-205ENST00000465559 NBPF15Q8N660 670 aa20.25■□□□□ 0.83
FDPS-205ENST00000465559 LAS1LQ9Y4W2 734 aaKnown RBP20.25■□□□□ 0.83
FDPS-205ENST00000465559 KRT24Q2M2I5 525 aa20.24■□□□□ 0.83
FDPS-205ENST00000465559 USP42Q9H9J4 1324 aaKnown RBP20.24■□□□□ 0.83
FDPS-205ENST00000465559 MSH5O43196 834 aa20.23■□□□□ 0.83
FDPS-205ENST00000465559 GYS1P13807 737 aa20.23■□□□□ 0.83
FDPS-205ENST00000465559 CANXP27824 592 aaKnown RBP20.23■□□□□ 0.83
FDPS-205ENST00000465559 BCORQ6W2J9 1755 aa20.22■□□□□ 0.83
FDPS-205ENST00000465559 HOXB7P09629 217 aa20.22■□□□□ 0.83
FDPS-205ENST00000465559 RFC4P35249 363 aa20.22■□□□□ 0.83
FDPS-205ENST00000465559 NARFQ9UHQ1 456 aa20.22■□□□□ 0.83
FDPS-205ENST00000465559 SCN7AQ01118 1682 aa20.22■□□□□ 0.83
FDPS-205ENST00000465559 LRP10Q7Z4F1 713 aa20.21■□□□□ 0.83
FDPS-205ENST00000465559 SRP68Q9UHB9 627 aaKnown RBP20.21■□□□□ 0.83
FDPS-205ENST00000465559 SALL2Q9Y467 1007 aaPredicted RBP20.21■□□□□ 0.83
FDPS-205ENST00000465559 ERBB4Q15303 1308 aa20.21■□□□□ 0.83
FDPS-205ENST00000465559 PIP4K2AP48426 406 aaPredicted RBP20.2■□□□□ 0.82
FDPS-205ENST00000465559 PDIA6Q15084 440 aa20.2■□□□□ 0.82
FDPS-205ENST00000465559 BCL2L12Q9HB09 334 aa20.2■□□□□ 0.82
FDPS-205ENST00000465559 SPINK5Q9NQ38 1064 aaPredicted RBP20.2■□□□□ 0.82
FDPS-205ENST00000465559 A0A087WZG4 1122 aa20.19■□□□□ 0.82
FDPS-205ENST00000465559 MSL1Q68DK7 614 aa20.19■□□□□ 0.82
FDPS-205ENST00000465559 NLGN1Q8N2Q7 840 aa20.18■□□□□ 0.82
FDPS-205ENST00000465559 TSR2Q969E8 191 aaKnown RBP20.18■□□□□ 0.82
FDPS-205ENST00000465559 DUSP27Q5VZP5 1158 aa20.17■□□□□ 0.82
FDPS-205ENST00000465559 USPL1Q5W0Q7 1092 aa20.17■□□□□ 0.82
FDPS-205ENST00000465559 C8orf58Q8NAV2 365 aa20.17■□□□□ 0.82
FDPS-205ENST00000465559 CAMTA2O94983 1202 aa20.16■□□□□ 0.82
FDPS-205ENST00000465559 TM4SF1P30408 202 aa20.16■□□□□ 0.82
FDPS-205ENST00000465559 FKBP8Q14318 412 aa20.16■□□□□ 0.82
FDPS-205ENST00000465559 ARXQ96QS3 562 aa20.16■□□□□ 0.82
FDPS-205ENST00000465559 RGL2O15211 777 aa20.15■□□□□ 0.82
FDPS-205ENST00000465559 ZPR1O75312 459 aa20.15■□□□□ 0.82
FDPS-205ENST00000465559 EIF2S2P20042 333 aaKnown RBP20.15■□□□□ 0.82
FDPS-205ENST00000465559 POLD1P28340 1107 aa20.15■□□□□ 0.82
FDPS-205ENST00000465559 TSPYL6Q8N831 410 aa20.15■□□□□ 0.82
FDPS-205ENST00000465559 TBC1D2BQ9UPU7 963 aa20.15■□□□□ 0.82
FDPS-205ENST00000465559 FANCIQ9NVI1 1328 aa20.15■□□□□ 0.82
FDPS-205ENST00000465559 NUP98P52948 1817 aa20.15■□□□□ 0.82
FDPS-205ENST00000465559 KIF13BQ9NQT8 1826 aa20.15■□□□□ 0.82
FDPS-205ENST00000465559 CACNA1FO60840 1977 aa20.14■□□□□ 0.81
FDPS-205ENST00000465559 AFDNP55196 1824 aaKnown RBP20.14■□□□□ 0.81
FDPS-205ENST00000465559 NRXN2Q9P2S2 1712 aa20.14■□□□□ 0.81
FDPS-205ENST00000465559 PROSER3Q2NL68 480 aa20.14■□□□□ 0.81
FDPS-205ENST00000465559 DZIP3Q86Y13 1208 aaKnown RBP20.14■□□□□ 0.81
FDPS-205ENST00000465559 MMP10P09238 476 aa20.13■□□□□ 0.81
FDPS-205ENST00000465559 DDX21Q9NR30 783 aaKnown RBP eCLIP20.13■□□□□ 0.81
FDPS-205ENST00000465559 HDGFL1Q5TGJ6 251 aa20.12■□□□□ 0.81
FDPS-205ENST00000465559 ZNF330Q9Y3S2 320 aaPredicted RBP20.12■□□□□ 0.81
FDPS-205ENST00000465559 MYL6BP14649 208 aa20.11■□□□□ 0.81
FDPS-205ENST00000465559 DDR1Q08345 913 aa20.11■□□□□ 0.81
FDPS-205ENST00000465559 CLEC4GQ6UXB4 293 aa20.11■□□□□ 0.81
FDPS-205ENST00000465559 ELL2O00472 640 aaPredicted RBP20.1■□□□□ 0.81
FDPS-205ENST00000465559 ANXA1P04083 346 aa20.1■□□□□ 0.81
FDPS-205ENST00000465559 GOLGA2Q08379 1002 aa20.1■□□□□ 0.81
FDPS-205ENST00000465559 NFIXQ14938 502 aa20.1■□□□□ 0.81
FDPS-205ENST00000465559 TTLL7Q6ZT98 887 aa20.1■□□□□ 0.81
FDPS-205ENST00000465559 TRMT2AQ8IZ69 625 aaKnown RBP20.1■□□□□ 0.81
FDPS-205ENST00000465559 NECTIN2Q92692 538 aa20.1■□□□□ 0.81
FDPS-205ENST00000465559 MYH16Q9H6N6 1097 aa20.1■□□□□ 0.81
FDPS-205ENST00000465559 CHPF2Q9P2E5 772 aa20.1■□□□□ 0.81
FDPS-205ENST00000465559 PPP1R1BQ9UD71 204 aaPredicted RBP20.1■□□□□ 0.81
FDPS-205ENST00000465559 ERVV-1B6SEH8 477 aa20.09■□□□□ 0.81
FDPS-205ENST00000465559 POLRMTO00411 1230 aaKnown RBP20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms