RNA–Protein interactions for RNA: ENST00000464783.1

RPUSD3-211, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 1,149 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-211ENST00000464783 CALD1Q05682 793 aaKnown RBP15.73■□□□□ 0.11
RPUSD3-211ENST00000464783 TRAPPC3LQ5T215 181 aa15.73■□□□□ 0.11
RPUSD3-211ENST00000464783 AMIGO3Q86WK7 504 aa15.73■□□□□ 0.11
RPUSD3-211ENST00000464783 PPP1R1BQ9UD71 204 aaPredicted RBP15.73■□□□□ 0.11
RPUSD3-211ENST00000464783 SNRPA1P09661 255 aaKnown RBP15.72■□□□□ 0.11
RPUSD3-211ENST00000464783 COL24A1Q17RW2 1714 aa15.71■□□□□ 0.11
RPUSD3-211ENST00000464783 ADRA2BP18089 450 aa15.71■□□□□ 0.11
RPUSD3-211ENST00000464783 CANXP27824 592 aaKnown RBP15.71■□□□□ 0.11
RPUSD3-211ENST00000464783 RFC4P35249 363 aa15.71■□□□□ 0.11
RPUSD3-211ENST00000464783 INTS5Q6P9B9 1019 aaKnown RBP15.71■□□□□ 0.11
RPUSD3-211ENST00000464783 BABAM1Q9NWV8 329 aa15.71■□□□□ 0.11
RPUSD3-211ENST00000464783 ZBTB1Q9Y2K1 713 aa15.71■□□□□ 0.11
RPUSD3-211ENST00000464783 POLD1P28340 1107 aa15.7■□□□□ 0.1
RPUSD3-211ENST00000464783 EIF4A1P60842 406 aaKnown RBP15.7■□□□□ 0.1
RPUSD3-211ENST00000464783 MSL1Q68DK7 614 aa15.7■□□□□ 0.1
RPUSD3-211ENST00000464783 ZNF330Q9Y3S2 320 aaPredicted RBP15.7■□□□□ 0.1
RPUSD3-211ENST00000464783 SALL2Q9Y467 1007 aaPredicted RBP15.7■□□□□ 0.1
RPUSD3-211ENST00000464783 PRAMEF22A3QJZ6 481 aa15.69■□□□□ 0.1
RPUSD3-211ENST00000464783 NPM2Q86SE8 214 aaKnown RBP15.69■□□□□ 0.1
RPUSD3-211ENST00000464783 MIER1Q8N108 512 aa15.69■□□□□ 0.1
RPUSD3-211ENST00000464783 ARHGEF1Q92888 912 aaKnown RBP15.69■□□□□ 0.1
RPUSD3-211ENST00000464783 USP16Q9Y5T5 823 aa15.69■□□□□ 0.1
RPUSD3-211ENST00000464783 SOS1Q07889 1333 aaPredicted RBP15.68■□□□□ 0.1
RPUSD3-211ENST00000464783 COL15A1P39059 1388 aa15.68■□□□□ 0.1
RPUSD3-211ENST00000464783 PTGER2P43116 358 aa15.68■□□□□ 0.1
RPUSD3-211ENST00000464783 CHL1O00533 1208 aa15.67■□□□□ 0.1
RPUSD3-211ENST00000464783 GIGYF1O75420 1035 aaPredicted RBP15.67■□□□□ 0.1
RPUSD3-211ENST00000464783 A1BGP04217 495 aa15.67■□□□□ 0.1
RPUSD3-211ENST00000464783 GNAI1P63096 354 aa15.67■□□□□ 0.1
RPUSD3-211ENST00000464783 CCDC27Q2M243 656 aa15.67■□□□□ 0.1
RPUSD3-211ENST00000464783 CFAP44Q96MT7 982 aa15.67■□□□□ 0.1
RPUSD3-211ENST00000464783 SRCAPQ6ZRS2 3230 aa15.67■□□□□ 0.1
RPUSD3-211ENST00000464783 ZPR1O75312 459 aa15.66■□□□□ 0.1
RPUSD3-211ENST00000464783 WWC1Q8IX03 1113 aa15.66■□□□□ 0.1
RPUSD3-211ENST00000464783 ARXQ96QS3 562 aa15.66■□□□□ 0.1
RPUSD3-211ENST00000464783 IFT57Q9NWB7 429 aa15.66■□□□□ 0.1
RPUSD3-211ENST00000464783 A0A087WZG4 1122 aa15.65■□□□□ 0.1
RPUSD3-211ENST00000464783 IL6STP40189 918 aaPredicted RBP15.65■□□□□ 0.1
RPUSD3-211ENST00000464783 PIP4K2AP48426 406 aaPredicted RBP15.65■□□□□ 0.1
RPUSD3-211ENST00000464783 KLHL34Q8N239 644 aa15.65■□□□□ 0.1
RPUSD3-211ENST00000464783 MBIPQ9NS73 344 aa15.65■□□□□ 0.1
RPUSD3-211ENST00000464783 USP42Q9H9J4 1324 aaKnown RBP15.65■□□□□ 0.1
RPUSD3-211ENST00000464783 SCN7AQ01118 1682 aa15.64■□□□□ 0.09
RPUSD3-211ENST00000464783 NCBP3Q53F19 620 aaKnown RBP15.64■□□□□ 0.09
RPUSD3-211ENST00000464783 SGIP1Q9BQI5 828 aa15.64■□□□□ 0.09
RPUSD3-211ENST00000464783 SRP68Q9UHB9 627 aaKnown RBP15.64■□□□□ 0.09
RPUSD3-211ENST00000464783 BCORQ6W2J9 1755 aa15.63■□□□□ 0.09
RPUSD3-211ENST00000464783 GYS1P13807 737 aa15.63■□□□□ 0.09
RPUSD3-211ENST00000464783 EIF2S2P20042 333 aaKnown RBP15.63■□□□□ 0.09
RPUSD3-211ENST00000464783 EIF5P55010 431 aaKnown RBP15.63■□□□□ 0.09
RPUSD3-211ENST00000464783 NLGN1Q8N2Q7 840 aa15.63■□□□□ 0.09
RPUSD3-211ENST00000464783 NGEFQ8N5V2 710 aa15.63■□□□□ 0.09
RPUSD3-211ENST00000464783 ZNF853P0CG23 659 aa15.62■□□□□ 0.09
RPUSD3-211ENST00000464783 KRT24Q2M2I5 525 aa15.62■□□□□ 0.09
RPUSD3-211ENST00000464783 USPL1Q5W0Q7 1092 aa15.62■□□□□ 0.09
RPUSD3-211ENST00000464783 NARFQ9UHQ1 456 aa15.62■□□□□ 0.09
RPUSD3-211ENST00000464783 MYL6BP14649 208 aa15.61■□□□□ 0.09
RPUSD3-211ENST00000464783 TBC1D2BQ9UPU7 963 aa15.61■□□□□ 0.09
RPUSD3-211ENST00000464783 IL16Q14005 1332 aa15.61■□□□□ 0.09
RPUSD3-211ENST00000464783 NBPF26B4DH59 902 aa15.6■□□□□ 0.09
RPUSD3-211ENST00000464783 MMP10P09238 476 aa15.6■□□□□ 0.09
RPUSD3-211ENST00000464783 NBPF10Q6P3W6 841 aaKnown RBP15.6■□□□□ 0.09
RPUSD3-211ENST00000464783 DZIP3Q86Y13 1208 aaKnown RBP15.6■□□□□ 0.09
RPUSD3-211ENST00000464783 WDR63Q8IWG1 891 aa15.6■□□□□ 0.09
RPUSD3-211ENST00000464783 NBPF15Q8N660 670 aa15.6■□□□□ 0.09
RPUSD3-211ENST00000464783 NECTIN2Q92692 538 aa15.6■□□□□ 0.09
RPUSD3-211ENST00000464783 TSR2Q969E8 191 aaKnown RBP15.6■□□□□ 0.09
RPUSD3-211ENST00000464783 FKBP8Q14318 412 aa15.59■□□□□ 0.09
RPUSD3-211ENST00000464783 DUSP27Q5VZP5 1158 aa15.59■□□□□ 0.09
RPUSD3-211ENST00000464783 FHDC1Q9C0D6 1143 aaPredicted RBP15.59■□□□□ 0.09
RPUSD3-211ENST00000464783 PARP3Q9Y6F1 533 aa15.59■□□□□ 0.09
RPUSD3-211ENST00000464783 ERBB4Q15303 1308 aa15.59■□□□□ 0.09
RPUSD3-211ENST00000464783 ELL2O00472 640 aaPredicted RBP15.58■□□□□ 0.08
RPUSD3-211ENST00000464783 HOXB7P09629 217 aa15.58■□□□□ 0.08
RPUSD3-211ENST00000464783 HDGFL1Q5TGJ6 251 aa15.58■□□□□ 0.08
RPUSD3-211ENST00000464783 NUP98P52948 1817 aa15.57■□□□□ 0.08
RPUSD3-211ENST00000464783 AFDNP55196 1824 aaKnown RBP15.57■□□□□ 0.08
RPUSD3-211ENST00000464783 KIF6Q6ZMV9 814 aa15.57■□□□□ 0.08
RPUSD3-211ENST00000464783 BICDL1Q6ZP65 573 aa15.56■□□□□ 0.08
RPUSD3-211ENST00000464783 SYT17Q9BSW7 474 aa15.56■□□□□ 0.08
RPUSD3-211ENST00000464783 MYH16Q9H6N6 1097 aa15.56■□□□□ 0.08
RPUSD3-211ENST00000464783 BCL2L12Q9HB09 334 aa15.56■□□□□ 0.08
RPUSD3-211ENST00000464783 ZNF652Q9Y2D9 606 aa15.56■□□□□ 0.08
RPUSD3-211ENST00000464783 FANCIQ9NVI1 1328 aa15.56■□□□□ 0.08
RPUSD3-211ENST00000464783 KIF13BQ9NQT8 1826 aa15.55■□□□□ 0.08
RPUSD3-211ENST00000464783 CAMTA2O94983 1202 aa15.55■□□□□ 0.08
RPUSD3-211ENST00000464783 ANXA1P04083 346 aa15.55■□□□□ 0.08
RPUSD3-211ENST00000464783 C8orf58Q8NAV2 365 aa15.55■□□□□ 0.08
RPUSD3-211ENST00000464783 CHPF2Q9P2E5 772 aa15.55■□□□□ 0.08
RPUSD3-211ENST00000464783 GOLGA2Q08379 1002 aa15.54■□□□□ 0.08
RPUSD3-211ENST00000464783 NFIXQ14938 502 aa15.54■□□□□ 0.08
RPUSD3-211ENST00000464783 CHMP4AQ9BY43 222 aa15.54■□□□□ 0.08
RPUSD3-211ENST00000464783 DDX21Q9NR30 783 aaKnown RBP eCLIP15.54■□□□□ 0.08
RPUSD3-211ENST00000464783 DDR1Q08345 913 aa15.53■□□□□ 0.08
RPUSD3-211ENST00000464783 PDIA6Q15084 440 aa15.53■□□□□ 0.08
RPUSD3-211ENST00000464783 PROSER3Q2NL68 480 aa15.53■□□□□ 0.08
RPUSD3-211ENST00000464783 TBC1D9BQ66K14 1250 aa15.53■□□□□ 0.08
RPUSD3-211ENST00000464783 ZBTB3Q9H5J0 574 aa15.53■□□□□ 0.08
RPUSD3-211ENST00000464783 DBF4Q9UBU7 674 aaPredicted RBP15.53■□□□□ 0.08
RPUSD3-211ENST00000464783 CD2APQ9Y5K6 639 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms