RNA–Protein interactions for RNA: ENST00000464539.1

TNRC6A-205, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 1 (best)

Gene TNRC6A, Length 1,853 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-205ENST00000464539 FMN2Q9NZ56 1722 aa13.92□□□□□ -0.18
TNRC6A-205ENST00000464539 EZH2Q15910 746 aaKnown RBP13.92□□□□□ -0.18
TNRC6A-205ENST00000464539 MRPL50Q8N5N7 158 aaKnown RBP13.92□□□□□ -0.18
TNRC6A-205ENST00000464539 ABCA3Q99758 1704 aa13.92□□□□□ -0.18
TNRC6A-205ENST00000464539 TNS1Q9HBL0 1735 aaKnown RBP13.92□□□□□ -0.18
TNRC6A-205ENST00000464539 FAM83GA6ND36 823 aa13.91□□□□□ -0.18
TNRC6A-205ENST00000464539 ADCY5O95622 1261 aa13.91□□□□□ -0.18
TNRC6A-205ENST00000464539 FAM193AP78312 1265 aa13.91□□□□□ -0.18
TNRC6A-205ENST00000464539 ABCC4O15439 1325 aa13.91□□□□□ -0.18
TNRC6A-205ENST00000464539 NRAPQ86VF7 1730 aa13.91□□□□□ -0.18
TNRC6A-205ENST00000464539 TMEM87AQ8NBN3 555 aa13.91□□□□□ -0.18
TNRC6A-205ENST00000464539 KIAA1524Q8TCG1 905 aa13.91□□□□□ -0.18
TNRC6A-205ENST00000464539 TMEM51Q9NW97 253 aa13.91□□□□□ -0.18
TNRC6A-205ENST00000464539 ADGRF5Q8IZF2 1346 aa13.9□□□□□ -0.18
TNRC6A-205ENST00000464539 GOLGA6L6A8MZA4 724 aa13.9□□□□□ -0.18
TNRC6A-205ENST00000464539 KDM4AO75164 1064 aa13.9□□□□□ -0.18
TNRC6A-205ENST00000464539 CCDC183Q5T5S1 534 aa13.9□□□□□ -0.18
TNRC6A-205ENST00000464539 WAPLQ7Z5K2 1190 aa13.9□□□□□ -0.18
TNRC6A-205ENST00000464539 CAMKK2Q96RR4 588 aa13.9□□□□□ -0.18
TNRC6A-205ENST00000464539 API5Q9BZZ5 524 aaKnown RBP13.9□□□□□ -0.18
TNRC6A-205ENST00000464539 ERC2O15083 957 aa13.89□□□□□ -0.19
TNRC6A-205ENST00000464539 PHF8Q9UPP1 1060 aa13.89□□□□□ -0.19
TNRC6A-205ENST00000464539 PPLO60437 1756 aa13.89□□□□□ -0.19
TNRC6A-205ENST00000464539 FAM182BQ5T319 152 aa13.89□□□□□ -0.19
TNRC6A-205ENST00000464539 LMOD2Q6P5Q4 547 aa13.89□□□□□ -0.19
TNRC6A-205ENST00000464539 TSC1Q92574 1164 aa13.89□□□□□ -0.19
TNRC6A-205ENST00000464539 TMX3Q96JJ7 454 aa13.89□□□□□ -0.19
TNRC6A-205ENST00000464539 BTG4Q9NY30 223 aa13.89□□□□□ -0.19
TNRC6A-205ENST00000464539 USP25Q9UHP3 1055 aa13.89□□□□□ -0.19
TNRC6A-205ENST00000464539 AK9Q5TCS8 1911 aa13.89□□□□□ -0.19
TNRC6A-205ENST00000464539 CCDC66A2RUB6 948 aa13.88□□□□□ -0.19
TNRC6A-205ENST00000464539 RIOK3O14730 519 aaKnown RBP13.88□□□□□ -0.19
TNRC6A-205ENST00000464539 VAMP4O75379 141 aa13.88□□□□□ -0.19
TNRC6A-205ENST00000464539 MX1P20591 662 aa13.88□□□□□ -0.19
TNRC6A-205ENST00000464539 ZNF771Q7L3S4 317 aaPredicted RBP13.88□□□□□ -0.19
TNRC6A-205ENST00000464539 TTC12Q9H892 705 aaPredicted RBP13.88□□□□□ -0.19
TNRC6A-205ENST00000464539 STK26Q9P289 416 aa13.88□□□□□ -0.19
TNRC6A-205ENST00000464539 PPP1R1BQ9UD71 204 aaPredicted RBP13.88□□□□□ -0.19
TNRC6A-205ENST00000464539 THSD7AQ9UPZ6 1657 aa13.88□□□□□ -0.19
TNRC6A-205ENST00000464539 U2SURPO15042 1029 aaKnown RBP13.87□□□□□ -0.19
TNRC6A-205ENST00000464539 COL3A1P02461 1466 aaPredicted RBP13.87□□□□□ -0.19
TNRC6A-205ENST00000464539 ANAPC15P60006 121 aa13.87□□□□□ -0.19
TNRC6A-205ENST00000464539 SPATA31A5Q5VU36 1347 aa13.87□□□□□ -0.19
TNRC6A-205ENST00000464539 KNDC1Q76NI1 1749 aa13.87□□□□□ -0.19
TNRC6A-205ENST00000464539 SPATA31A7Q8IWB4 1347 aa13.87□□□□□ -0.19
TNRC6A-205ENST00000464539 RPAP2Q8IXW5 612 aaPredicted RBP13.87□□□□□ -0.19
TNRC6A-205ENST00000464539 CGNQ9P2M7 1197 aaKnown RBP13.87□□□□□ -0.19
TNRC6A-205ENST00000464539 IFT172Q9UG01 1749 aa13.87□□□□□ -0.19
TNRC6A-205ENST00000464539 WDR33Q9C0J8 1336 aaKnown RBP13.87□□□□□ -0.19
TNRC6A-205ENST00000464539 SPDYE4A6NLX3 237 aa13.87□□□□□ -0.19
TNRC6A-205ENST00000464539 FCHSD2O94868 740 aa13.87□□□□□ -0.19
TNRC6A-205ENST00000464539 SDSP20132 328 aa13.87□□□□□ -0.19
TNRC6A-205ENST00000464539 FAM196AQ6ZSG2 479 aa13.87□□□□□ -0.19
TNRC6A-205ENST00000464539 CREBRFQ8IUR6 639 aa13.87□□□□□ -0.19
TNRC6A-205ENST00000464539 IPO4Q8TEX9 1081 aaKnown RBP13.87□□□□□ -0.19
TNRC6A-205ENST00000464539 JARID2Q92833 1246 aaPredicted RBP13.87□□□□□ -0.19
TNRC6A-205ENST00000464539 IL17RAQ96F46 866 aa13.87□□□□□ -0.19
TNRC6A-205ENST00000464539 ZNF830Q96NB3 372 aaPredicted RBP13.87□□□□□ -0.19
TNRC6A-205ENST00000464539 SPON1Q9HCB6 807 aa13.87□□□□□ -0.19
TNRC6A-205ENST00000464539 COL14A1Q05707 1796 aaKnown RBP13.86□□□□□ -0.19
TNRC6A-205ENST00000464539 MCCP23508 829 aa13.86□□□□□ -0.19
TNRC6A-205ENST00000464539 U2AF2P26368 475 aaKnown RBP eCLIP13.86□□□□□ -0.199e-11■■□□□ 12.2
TNRC6A-205ENST00000464539 NBPF14Q5TI25 921 aa13.86□□□□□ -0.19
TNRC6A-205ENST00000464539 EVC2Q86UK5 1308 aa13.85□□□□□ -0.19
TNRC6A-205ENST00000464539 TRIM37O94972 964 aa13.85□□□□□ -0.19
TNRC6A-205ENST00000464539 APBA3O96018 575 aa13.85□□□□□ -0.19
TNRC6A-205ENST00000464539 SLC20A2Q08357 652 aa13.85□□□□□ -0.19
TNRC6A-205ENST00000464539 C14orf93Q9H972 538 aaKnown RBP13.85□□□□□ -0.19
TNRC6A-205ENST00000464539 MORC2Q9Y6X9 1032 aaPredicted RBP13.85□□□□□ -0.19
TNRC6A-205ENST00000464539 EPB41L2O43491 1005 aaKnown RBP13.84□□□□□ -0.19
TNRC6A-205ENST00000464539 NEK4P51957 841 aa13.84□□□□□ -0.19
TNRC6A-205ENST00000464539 USP48Q86UV5 1035 aa13.84□□□□□ -0.19
TNRC6A-205ENST00000464539 ANKRD44Q8N8A2 993 aa13.84□□□□□ -0.19
TNRC6A-205ENST00000464539 C1orf115Q9H7X2 142 aa13.84□□□□□ -0.19
TNRC6A-205ENST00000464539 GNAI1P63096 354 aa13.84□□□□□ -0.19
TNRC6A-205ENST00000464539 IFFO2Q5TF58 517 aa13.84□□□□□ -0.19
TNRC6A-205ENST00000464539 OSBPL3Q9H4L5 887 aa13.84□□□□□ -0.19
TNRC6A-205ENST00000464539 CTNNA3Q9UI47 895 aa13.84□□□□□ -0.19
TNRC6A-205ENST00000464539 DDX41Q9UJV9 622 aaKnown RBP13.84□□□□□ -0.19
TNRC6A-205ENST00000464539 NAP1L2Q9ULW6 460 aaPredicted RBP13.84□□□□□ -0.19
TNRC6A-205ENST00000464539 RREB1Q92766 1687 aa13.84□□□□□ -0.19
TNRC6A-205ENST00000464539 QRICH2Q9H0J4 1663 aa13.84□□□□□ -0.19
TNRC6A-205ENST00000464539 RTL1A6NKG5 1358 aa13.83□□□□□ -0.19
TNRC6A-205ENST00000464539 SMTNL1A8MU46 457 aa13.83□□□□□ -0.2
TNRC6A-205ENST00000464539 DIAPH1O60610 1272 aaKnown RBP13.83□□□□□ -0.2
TNRC6A-205ENST00000464539 PAXBP1Q9Y5B6 917 aa13.83□□□□□ -0.2
TNRC6A-205ENST00000464539 KCNQ2O43526 872 aa13.82□□□□□ -0.2
TNRC6A-205ENST00000464539 UBE2HP62256 183 aa13.82□□□□□ -0.2
TNRC6A-205ENST00000464539 SIRT1Q96EB6 747 aa13.82□□□□□ -0.2
TNRC6A-205ENST00000464539 IFT57Q9NWB7 429 aa13.82□□□□□ -0.2
TNRC6A-205ENST00000464539 SLFN14P0C7P3 912 aa13.82□□□□□ -0.2
TNRC6A-205ENST00000464539 NUP188Q5SRE5 1749 aa13.82□□□□□ -0.2
TNRC6A-205ENST00000464539 TRAK1Q9UPV9 953 aa13.81□□□□□ -0.2
TNRC6A-205ENST00000464539 YTHDC2Q9H6S0 1430 aaKnown RBP13.81□□□□□ -0.2
TNRC6A-205ENST00000464539 GADD45BO75293 160 aaPredicted RBP13.8□□□□□ -0.2
TNRC6A-205ENST00000464539 CDK11BP21127 795 aaKnown RBP13.8□□□□□ -0.2
TNRC6A-205ENST00000464539 NCBP1Q09161 790 aaKnown RBP13.8□□□□□ -0.2
TNRC6A-205ENST00000464539 C17orf53Q8N3J3 647 aaPredicted RBP13.8□□□□□ -0.2
TNRC6A-205ENST00000464539 FUCA2Q9BTY2 467 aa13.8□□□□□ -0.2
TNRC6A-205ENST00000464539 ATP6V1DQ9Y5K8 247 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms