RNA–Protein interactions for RNA: ENST00000464363.5

NELFCD-202, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 2

Gene NELFCD, Length 764 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-202ENST00000464363 NEFMP07197 916 aa23.41■■□□□ 1.34
NELFCD-202ENST00000464363 CANXP27824 592 aaKnown RBP23.41■■□□□ 1.34
NELFCD-202ENST00000464363 FMNL2Q96PY5 1086 aa23.41■■□□□ 1.34
NELFCD-202ENST00000464363 COL15A1P39059 1388 aa23.4■■□□□ 1.34
NELFCD-202ENST00000464363 DPEP1P16444 411 aa23.4■■□□□ 1.34
NELFCD-202ENST00000464363 BCS1LQ9Y276 419 aa23.4■■□□□ 1.34
NELFCD-202ENST00000464363 KIF13BQ9NQT8 1826 aa23.4■■□□□ 1.34
NELFCD-202ENST00000464363 HEG1Q9ULI3 1381 aa23.4■■□□□ 1.34
NELFCD-202ENST00000464363 A0A087WZG4 1122 aa23.39■■□□□ 1.33
NELFCD-202ENST00000464363 GIGYF1O75420 1035 aaPredicted RBP23.39■■□□□ 1.33
NELFCD-202ENST00000464363 TM4SF1P30408 202 aa23.39■■□□□ 1.33
NELFCD-202ENST00000464363 DDR1Q08345 913 aa23.39■■□□□ 1.33
NELFCD-202ENST00000464363 NPM2Q86SE8 214 aaKnown RBP23.38■■□□□ 1.33
NELFCD-202ENST00000464363 UBR2Q8IWV8 1755 aa23.37■■□□□ 1.33
NELFCD-202ENST00000464363 POLRMTO00411 1230 aaKnown RBP23.37■■□□□ 1.33
NELFCD-202ENST00000464363 HTATSF1O43719 755 aaKnown RBP23.37■■□□□ 1.33
NELFCD-202ENST00000464363 C1QTNF8P60827 252 aa23.37■■□□□ 1.33
NELFCD-202ENST00000464363 PIM2Q9P1W9 311 aa23.36■■□□□ 1.33
NELFCD-202ENST00000464363 EIF5P55010 431 aaKnown RBP23.35■■□□□ 1.33
NELFCD-202ENST00000464363 MCM10Q7L590 875 aa23.35■■□□□ 1.33
NELFCD-202ENST00000464363 ATP10DQ9P241 1426 aa23.34■■□□□ 1.33
NELFCD-202ENST00000464363 NFIXQ14938 502 aa23.34■■□□□ 1.33
NELFCD-202ENST00000464363 PNNQ9H307 717 aaKnown RBP23.34■■□□□ 1.33
NELFCD-202ENST00000464363 GPBP1L1Q9HC44 474 aaPredicted RBP23.34■■□□□ 1.33
NELFCD-202ENST00000464363 ZNF330Q9Y3S2 320 aaPredicted RBP23.34■■□□□ 1.33
NELFCD-202ENST00000464363 N4BP2Q86UW6 1770 aaPredicted RBP23.34■■□□□ 1.33
NELFCD-202ENST00000464363 SIPA1L3O60292 1781 aaPredicted RBP23.33■■□□□ 1.33
NELFCD-202ENST00000464363 KCNA3P22001 575 aa23.33■■□□□ 1.33
NELFCD-202ENST00000464363 ARHGAP27Q6ZUM4 889 aa23.33■■□□□ 1.33
NELFCD-202ENST00000464363 IL6STP40189 918 aaPredicted RBP23.32■■□□□ 1.32
NELFCD-202ENST00000464363 DALRD3Q5D0E6 543 aaKnown RBP23.32■■□□□ 1.32
NELFCD-202ENST00000464363 BCL2L12Q9HB09 334 aa23.32■■□□□ 1.32
NELFCD-202ENST00000464363 KIAA1551Q9HCM1 1747 aa23.31■■□□□ 1.32
NELFCD-202ENST00000464363 KCNQ3O43525 872 aa23.31■■□□□ 1.32
NELFCD-202ENST00000464363 ADCY9O60503 1353 aa23.3■■□□□ 1.32
NELFCD-202ENST00000464363 SERPINB2P05120 415 aa23.3■■□□□ 1.32
NELFCD-202ENST00000464363 DCTN1Q14203 1278 aa23.3■■□□□ 1.32
NELFCD-202ENST00000464363 RALBP1Q15311 655 aa23.3■■□□□ 1.32
NELFCD-202ENST00000464363 A1BGP04217 495 aa23.29■■□□□ 1.32
NELFCD-202ENST00000464363 SNRPA1P09661 255 aaKnown RBP23.29■■□□□ 1.32
NELFCD-202ENST00000464363 TAF7Q15545 349 aaPredicted RBP23.29■■□□□ 1.32
NELFCD-202ENST00000464363 CHRNA5P30532 468 aa23.28■■□□□ 1.32
NELFCD-202ENST00000464363 BICDL1Q6ZP65 573 aa23.28■■□□□ 1.32
NELFCD-202ENST00000464363 ZNF526Q8TF50 670 aaPredicted RBP23.28■■□□□ 1.32
NELFCD-202ENST00000464363 TBC1D2BQ9UPU7 963 aa23.28■■□□□ 1.32
NELFCD-202ENST00000464363 USP16Q9Y5T5 823 aa23.27■■□□□ 1.32
NELFCD-202ENST00000464363 MAPK8IP3Q9UPT6 1336 aa23.26■■□□□ 1.31
NELFCD-202ENST00000464363 SENP3-EIF4A1A0A087X0R7 540 aa23.25■■□□□ 1.31
NELFCD-202ENST00000464363 DDX10Q13206 875 aaKnown RBP23.25■■□□□ 1.31
NELFCD-202ENST00000464363 PNISRQ8TF01 805 aaKnown RBP23.25■■□□□ 1.31
NELFCD-202ENST00000464363 PLEKHF1Q96S99 279 aa23.25■■□□□ 1.31
NELFCD-202ENST00000464363 NFE2L2Q16236 605 aa23.24■■□□□ 1.31
NELFCD-202ENST00000464363 TBC1D9BQ66K14 1250 aa23.24■■□□□ 1.31
NELFCD-202ENST00000464363 DZIP3Q86Y13 1208 aaKnown RBP23.23■■□□□ 1.31
NELFCD-202ENST00000464363 SETDB2Q96T68 719 aa23.23■■□□□ 1.31
NELFCD-202ENST00000464363 BRCA1P38398 1863 aaKnown RBP23.22■■□□□ 1.31
NELFCD-202ENST00000464363 H0YIN7 160 aa23.22■■□□□ 1.31
NELFCD-202ENST00000464363 PRAMEF22A3QJZ6 481 aa23.21■■□□□ 1.31
NELFCD-202ENST00000464363 NPHP1O15259 732 aa23.21■■□□□ 1.31
NELFCD-202ENST00000464363 CAMTA2O94983 1202 aa23.21■■□□□ 1.31
NELFCD-202ENST00000464363 C2CD5Q86YS7 1000 aa23.21■■□□□ 1.31
NELFCD-202ENST00000464363 MIS18AQ9NYP9 233 aa23.21■■□□□ 1.31
NELFCD-202ENST00000464363 CARMIL3Q8ND23 1372 aa23.21■■□□□ 1.31
NELFCD-202ENST00000464363 PDE6BP35913 854 aa23.2■■□□□ 1.3
NELFCD-202ENST00000464363 PDZRN3Q9UPQ7 1066 aa23.2■■□□□ 1.3
NELFCD-202ENST00000464363 ZNF652Q9Y2D9 606 aa23.2■■□□□ 1.3
NELFCD-202ENST00000464363 AFDNP55196 1824 aaKnown RBP23.19■■□□□ 1.3
NELFCD-202ENST00000464363 ARFGEF1Q9Y6D6 1849 aa23.19■■□□□ 1.3
NELFCD-202ENST00000464363 NRXN2Q9P2S2 1712 aa23.19■■□□□ 1.3
NELFCD-202ENST00000464363 PIP4K2AP48426 406 aaPredicted RBP23.19■■□□□ 1.3
NELFCD-202ENST00000464363 C9orf131Q5VYM1 1079 aa23.19■■□□□ 1.3
NELFCD-202ENST00000464363 CLEC4GQ6UXB4 293 aa23.19■■□□□ 1.3
NELFCD-202ENST00000464363 TTLL6Q8N841 843 aa23.19■■□□□ 1.3
NELFCD-202ENST00000464363 BRIP1Q9BX63 1249 aa23.19■■□□□ 1.3
NELFCD-202ENST00000464363 CNBD1Q8NA66 436 aa23.17■■□□□ 1.3
NELFCD-202ENST00000464363 SCN7AQ01118 1682 aa23.16■■□□□ 1.3
NELFCD-202ENST00000464363 MYBBP1AQ9BQG0 1328 aaKnown RBP23.16■■□□□ 1.3
NELFCD-202ENST00000464363 ST5P78524 1137 aa23.16■■□□□ 1.3
NELFCD-202ENST00000464363 PRR5LQ6MZQ0 368 aa23.16■■□□□ 1.3
NELFCD-202ENST00000464363 RNF181Q9P0P0 153 aa23.15■■□□□ 1.3
NELFCD-202ENST00000464363 NBPF26B4DH59 902 aa23.14■■□□□ 1.29
NELFCD-202ENST00000464363 RGL2O15211 777 aa23.14■■□□□ 1.29
NELFCD-202ENST00000464363 RIPK4P57078 832 aa23.14■■□□□ 1.29
NELFCD-202ENST00000464363 NBPF10Q6P3W6 841 aaKnown RBP23.14■■□□□ 1.29
NELFCD-202ENST00000464363 NBPF15Q8N660 670 aa23.14■■□□□ 1.29
NELFCD-202ENST00000464363 ZNF622Q969S3 477 aaKnown RBP eCLIP23.14■■□□□ 1.292e-12■□□□□ 9.8
NELFCD-202ENST00000464363 THUMPD2Q9BTF0 503 aaKnown RBP23.14■■□□□ 1.29
NELFCD-202ENST00000464363 EIF4A1P60842 406 aaKnown RBP23.13■■□□□ 1.29
NELFCD-202ENST00000464363 NBPF5PQ86XG9 351 aaPredicted RBP23.13■■□□□ 1.29
NELFCD-202ENST00000464363 DLG5Q8TDM6 1919 aa23.12■■□□□ 1.29
NELFCD-202ENST00000464363 LMOD3Q0VAK6 560 aa23.12■■□□□ 1.29
NELFCD-202ENST00000464363 CCDC24Q8N4L8 307 aa23.12■■□□□ 1.29
NELFCD-202ENST00000464363 KIF3CO14782 793 aa23.11■■□□□ 1.29
NELFCD-202ENST00000464363 WDR43Q15061 677 aaKnown RBP eCLIP23.1■■□□□ 1.29
NELFCD-202ENST00000464363 TPTE2Q6XPS3 522 aa23.1■■□□□ 1.29
NELFCD-202ENST00000464363 TSPYL4Q9UJ04 414 aa23.1■■□□□ 1.29
NELFCD-202ENST00000464363 NIP7Q9Y221 180 aaKnown RBP eCLIP23.1■■□□□ 1.29
NELFCD-202ENST00000464363 KDM2BQ8NHM5 1336 aa23.09■■□□□ 1.29
NELFCD-202ENST00000464363 LMNB1P20700 586 aa23.09■■□□□ 1.29
NELFCD-202ENST00000464363 TMPOP42166 694 aaKnown RBP23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms