RNA–Protein interactions for RNA: ENST00000464148.2

MRPL55-224, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-224ENST00000464148 LMNB1P20700 586 aa18.16■□□□□ 0.5
MRPL55-224ENST00000464148 SOS1Q07889 1333 aaPredicted RBP18.16■□□□□ 0.5
MRPL55-224ENST00000464148 NFIXQ14938 502 aa18.15■□□□□ 0.5
MRPL55-224ENST00000464148 AKAP4Q5JQC9 854 aa18.15■□□□□ 0.5
MRPL55-224ENST00000464148 SLC52A2Q9HAB3 445 aa18.15■□□□□ 0.5
MRPL55-224ENST00000464148 NARFQ9UHQ1 456 aa18.15■□□□□ 0.5
MRPL55-224ENST00000464148 AFDNP55196 1824 aaKnown RBP18.14■□□□□ 0.5
MRPL55-224ENST00000464148 GLTPD2A6NH11 291 aa18.14■□□□□ 0.49
MRPL55-224ENST00000464148 CYP19A1P11511 503 aaPredicted RBP18.14■□□□□ 0.49
MRPL55-224ENST00000464148 TTLL6Q8N841 843 aa18.14■□□□□ 0.49
MRPL55-224ENST00000464148 COL15A1P39059 1388 aa18.14■□□□□ 0.49
MRPL55-224ENST00000464148 SERPINB2P05120 415 aa18.13■□□□□ 0.49
MRPL55-224ENST00000464148 SLC39A6Q13433 755 aa18.13■□□□□ 0.49
MRPL55-224ENST00000464148 C2CD5Q86YS7 1000 aa18.13■□□□□ 0.49
MRPL55-224ENST00000464148 LGR6Q9HBX8 967 aa18.13■□□□□ 0.49
MRPL55-224ENST00000464148 H0YIN7 160 aa18.12■□□□□ 0.49
MRPL55-224ENST00000464148 IL13P35225 146 aa18.12■□□□□ 0.49
MRPL55-224ENST00000464148 DLEC1Q9Y238 1755 aa18.12■□□□□ 0.49
MRPL55-224ENST00000464148 EIF4G2P78344 907 aaKnown RBP eCLIP18.11■□□□□ 0.49
MRPL55-224ENST00000464148 ZBTB1Q9Y2K1 713 aa18.11■□□□□ 0.49
MRPL55-224ENST00000464148 TIAM2Q8IVF5 1701 aa18.11■□□□□ 0.49
MRPL55-224ENST00000464148 NRXN2Q9P2S2 1712 aa18.11■□□□□ 0.49
MRPL55-224ENST00000464148 PRELPP51888 382 aa18.1■□□□□ 0.49
MRPL55-224ENST00000464148 TRIM26Q12899 539 aaPredicted RBP18.1■□□□□ 0.49
MRPL55-224ENST00000464148 KNSTRNQ9Y448 316 aa18.1■□□□□ 0.49
MRPL55-224ENST00000464148 RNMTO43148 476 aaKnown RBP18.09■□□□□ 0.49
MRPL55-224ENST00000464148 HSPA1AP0DMV8 641 aaKnown RBP18.09■□□□□ 0.49
MRPL55-224ENST00000464148 HSPA1BP0DMV9 641 aaKnown RBP18.09■□□□□ 0.49
MRPL55-224ENST00000464148 HSPA5P11021 654 aaKnown RBP18.09■□□□□ 0.49
MRPL55-224ENST00000464148 CANXP27824 592 aaKnown RBP18.09■□□□□ 0.49
MRPL55-224ENST00000464148 DPY19L2Q6NUT2 758 aa18.09■□□□□ 0.49
MRPL55-224ENST00000464148 BICDL1Q6ZP65 573 aa18.09■□□□□ 0.49
MRPL55-224ENST00000464148 BCL2L12Q9HB09 334 aa18.09■□□□□ 0.49
MRPL55-224ENST00000464148 CCDC88AQ3V6T2 1871 aa18.09■□□□□ 0.49
MRPL55-224ENST00000464148 MRC1P22897 1456 aa18.07■□□□□ 0.48
MRPL55-224ENST00000464148 VIRMAQ69YN4 1812 aaKnown RBP18.07■□□□□ 0.48
MRPL55-224ENST00000464148 NFKBIEO00221 500 aa18.07■□□□□ 0.48
MRPL55-224ENST00000464148 HMOX1P09601 288 aa18.07■□□□□ 0.48
MRPL55-224ENST00000464148 VSIG10Q8N0Z9 540 aa18.07■□□□□ 0.48
MRPL55-224ENST00000464148 ZNF622Q969S3 477 aaKnown RBP eCLIP18.07■□□□□ 0.48
MRPL55-224ENST00000464148 CARMIL3Q8ND23 1372 aa18.06■□□□□ 0.48
MRPL55-224ENST00000464148 ZNF219Q9P2Y4 722 aaPredicted RBP18.06■□□□□ 0.48
MRPL55-224ENST00000464148 A0A087WZG4 1122 aa18.05■□□□□ 0.48
MRPL55-224ENST00000464148 STARD3NLO95772 234 aa18.05■□□□□ 0.48
MRPL55-224ENST00000464148 TTC5Q8N0Z6 440 aa18.05■□□□□ 0.48
MRPL55-224ENST00000464148 C21orf2O43822 256 aa18.04■□□□□ 0.48
MRPL55-224ENST00000464148 MTHFSDQ2M296 383 aaKnown RBP18.04■□□□□ 0.48
MRPL55-224ENST00000464148 ERFEQ4G0M1 354 aa18.04■□□□□ 0.48
MRPL55-224ENST00000464148 POTECB2RU33 542 aa18.03■□□□□ 0.48
MRPL55-224ENST00000464148 PDE6BP35913 854 aa18.03■□□□□ 0.48
MRPL55-224ENST00000464148 PDZRN3Q9UPQ7 1066 aa18.03■□□□□ 0.48
MRPL55-224ENST00000464148 ZNF330Q9Y3S2 320 aaPredicted RBP18.03■□□□□ 0.48
MRPL55-224ENST00000464148 UBR2Q8IWV8 1755 aa18.02■□□□□ 0.48
MRPL55-224ENST00000464148 EIF5P55010 431 aaKnown RBP18.02■□□□□ 0.48
MRPL55-224ENST00000464148 TBC1D9BQ66K14 1250 aa18.02■□□□□ 0.48
MRPL55-224ENST00000464148 BRIP1Q9BX63 1249 aa18.02■□□□□ 0.48
MRPL55-224ENST00000464148 NPHP1O15259 732 aa18.01■□□□□ 0.47
MRPL55-224ENST00000464148 CCDC24Q8N4L8 307 aa18.01■□□□□ 0.47
MRPL55-224ENST00000464148 PCGF6Q9BYE7 350 aa18.01■□□□□ 0.47
MRPL55-224ENST00000464148 ANKRD31Q8N7Z5 1873 aa18.01■□□□□ 0.47
MRPL55-224ENST00000464148 CLSPNQ9HAW4 1339 aa18■□□□□ 0.47
MRPL55-224ENST00000464148 CHADLQ6NUI6 762 aa18■□□□□ 0.47
MRPL55-224ENST00000464148 NPM2Q86SE8 214 aaKnown RBP18■□□□□ 0.47
MRPL55-224ENST00000464148 TBC1D2BQ9UPU7 963 aa18■□□□□ 0.47
MRPL55-224ENST00000464148 DIAPH1O60610 1272 aaKnown RBP17.99■□□□□ 0.47
MRPL55-224ENST00000464148 TEFQ10587 303 aa17.99■□□□□ 0.47
MRPL55-224ENST00000464148 PRR5LQ6MZQ0 368 aa17.99■□□□□ 0.47
MRPL55-224ENST00000464148 TEX13AQ9BXU3 409 aaPredicted RBP17.99■□□□□ 0.47
MRPL55-224ENST00000464148 TAOK3Q9H2K8 898 aa17.99■□□□□ 0.47
MRPL55-224ENST00000464148 CREBZFQ9NS37 354 aa17.99■□□□□ 0.47
MRPL55-224ENST00000464148 MKRN1Q9UHC7 482 aaKnown RBP17.99■□□□□ 0.47
MRPL55-224ENST00000464148 DICER1Q9UPY3 1922 aaKnown RBP17.99■□□□□ 0.47
MRPL55-224ENST00000464148 COL11A2P13942 1736 aaPredicted RBP17.98■□□□□ 0.47
MRPL55-224ENST00000464148 AMER1Q5JTC6 1135 aaPredicted RBP17.98■□□□□ 0.47
MRPL55-224ENST00000464148 SCN7AQ01118 1682 aa17.98■□□□□ 0.47
MRPL55-224ENST00000464148 FER1L6Q2WGJ9 1857 aa17.98■□□□□ 0.47
MRPL55-224ENST00000464148 CNBD1Q8NA66 436 aa17.97■□□□□ 0.47
MRPL55-224ENST00000464148 CNKSR1Q969H4 720 aa17.97■□□□□ 0.47
MRPL55-224ENST00000464148 ZNF496Q96IT1 587 aaPredicted RBP17.97■□□□□ 0.47
MRPL55-224ENST00000464148 SETDB2Q96T68 719 aa17.97■□□□□ 0.47
MRPL55-224ENST00000464148 LTBP3Q9NS15 1303 aa17.97■□□□□ 0.47
MRPL55-224ENST00000464148 HEG1Q9ULI3 1381 aa17.96■□□□□ 0.47
MRPL55-224ENST00000464148 DDNO94850 711 aaPredicted RBP17.96■□□□□ 0.47
MRPL55-224ENST00000464148 IL6STP40189 918 aaPredicted RBP17.96■□□□□ 0.47
MRPL55-224ENST00000464148 ST5P78524 1137 aa17.96■□□□□ 0.47
MRPL55-224ENST00000464148 ZNF790Q6PG37 636 aa17.96■□□□□ 0.47
MRPL55-224ENST00000464148 CACNA1SQ13698 1873 aa17.95■□□□□ 0.46
MRPL55-224ENST00000464148 POTEIP0CG38 1075 aa17.95■□□□□ 0.46
MRPL55-224ENST00000464148 POTEJP0CG39 1038 aa17.95■□□□□ 0.46
MRPL55-224ENST00000464148 SOGA3Q5TF21 947 aa17.95■□□□□ 0.46
MRPL55-224ENST00000464148 STYK1Q6J9G0 422 aa17.95■□□□□ 0.46
MRPL55-224ENST00000464148 GNAT3A8MTJ3 354 aa17.94■□□□□ 0.46
MRPL55-224ENST00000464148 PRPF40BQ6NWY9 871 aaKnown RBP17.94■□□□□ 0.46
MRPL55-224ENST00000464148 FMNL2Q96PY5 1086 aa17.94■□□□□ 0.46
MRPL55-224ENST00000464148 IQCA1LA6NCM1 817 aa17.93■□□□□ 0.46
MRPL55-224ENST00000464148 U2SURPO15042 1029 aaKnown RBP17.93■□□□□ 0.46
MRPL55-224ENST00000464148 A1BGP04217 495 aa17.93■□□□□ 0.46
MRPL55-224ENST00000464148 SRGNP10124 158 aa17.93■□□□□ 0.46
MRPL55-224ENST00000464148 IL17REQ8NFR9 667 aa17.93■□□□□ 0.46
MRPL55-224ENST00000464148 MASTLQ96GX5 879 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms