RNA–Protein interactions for RNA: ENST00000464053.1

GYPC-205, Transcript of glycophorin C (Gerbich blood group), humanhuman

TSL 1 (best)

Gene GYPC, Length 1,805 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-205ENST00000464053 USP16Q9Y5T5 823 aa19.65■□□□□ 0.74
GYPC-205ENST00000464053 FLIIQ13045 1269 aa19.65■□□□□ 0.74
GYPC-205ENST00000464053 ATG3Q9NT62 314 aa19.65■□□□□ 0.74
GYPC-205ENST00000464053 PTCD1O75127 700 aaKnown RBP19.64■□□□□ 0.73
GYPC-205ENST00000464053 PROSER3Q2NL68 480 aa19.64■□□□□ 0.73
GYPC-205ENST00000464053 FBXO41Q8TF61 875 aa19.63■□□□□ 0.73
GYPC-205ENST00000464053 ONECUT3O60422 494 aaPredicted RBP19.62■□□□□ 0.73
GYPC-205ENST00000464053 CHMP4AQ9BY43 222 aa19.62■□□□□ 0.73
GYPC-205ENST00000464053 DBF4Q9UBU7 674 aaPredicted RBP19.62■□□□□ 0.73
GYPC-205ENST00000464053 LAMB4A4D0S4 1761 aa19.62■□□□□ 0.73
GYPC-205ENST00000464053 F6X3S4 739 aa19.62■□□□□ 0.73
GYPC-205ENST00000464053 PDIA6Q15084 440 aa19.62■□□□□ 0.73
GYPC-205ENST00000464053 FKBP5Q13451 457 aaPredicted RBP19.61■□□□□ 0.73
GYPC-205ENST00000464053 DDX19BQ9UMR2 479 aa19.61■□□□□ 0.73
GYPC-205ENST00000464053 KCNQ2O43526 872 aa19.6■□□□□ 0.73
GYPC-205ENST00000464053 SEPT12Q8IYM1 358 aa19.6■□□□□ 0.73
GYPC-205ENST00000464053 FAM182BQ5T319 152 aa19.59■□□□□ 0.73
GYPC-205ENST00000464053 INTS3Q68E01 1043 aaKnown RBP19.59■□□□□ 0.73
GYPC-205ENST00000464053 DDX21Q9NR30 783 aaKnown RBP eCLIP19.59■□□□□ 0.73
GYPC-205ENST00000464053 PIP4K2AP48426 406 aaPredicted RBP19.58■□□□□ 0.73
GYPC-205ENST00000464053 RBM42Q9BTD8 480 aaKnown RBP19.58■□□□□ 0.72
GYPC-205ENST00000464053 ZBTB7BO15156 539 aaPredicted RBP19.57■□□□□ 0.72
GYPC-205ENST00000464053 MYL6BP14649 208 aa19.57■□□□□ 0.72
GYPC-205ENST00000464053 SLC4A10Q6U841 1118 aa19.57■□□□□ 0.72
GYPC-205ENST00000464053 SLC4A9Q96Q91 983 aa19.57■□□□□ 0.72
GYPC-205ENST00000464053 HYPKQ9NX55 129 aa19.57■□□□□ 0.72
GYPC-205ENST00000464053 ZBTB40Q9NUA8 1239 aa19.56■□□□□ 0.72
GYPC-205ENST00000464053 PCDHB15Q9Y5E8 787 aa19.56■□□□□ 0.72
GYPC-205ENST00000464053 AAMPQ13685 434 aa19.55■□□□□ 0.72
GYPC-205ENST00000464053 LRP10Q7Z4F1 713 aa19.55■□□□□ 0.72
GYPC-205ENST00000464053 PTF1AQ7RTS3 328 aa19.55■□□□□ 0.72
GYPC-205ENST00000464053 VSIG10Q8N0Z9 540 aa19.55■□□□□ 0.72
GYPC-205ENST00000464053 NBPF26B4DH59 902 aa19.54■□□□□ 0.72
GYPC-205ENST00000464053 NBPF14Q5TI25 921 aa19.54■□□□□ 0.72
GYPC-205ENST00000464053 ZNF772Q68DY9 489 aaPredicted RBP19.54■□□□□ 0.72
GYPC-205ENST00000464053 NBPF10Q6P3W6 841 aaKnown RBP19.54■□□□□ 0.72
GYPC-205ENST00000464053 DNAJC10Q8IXB1 793 aa19.54■□□□□ 0.72
GYPC-205ENST00000464053 NBPF15Q8N660 670 aa19.54■□□□□ 0.72
GYPC-205ENST00000464053 ADCY9O60503 1353 aa19.54■□□□□ 0.72
GYPC-205ENST00000464053 PI4KAP2A4QPH2 592 aa19.53■□□□□ 0.72
GYPC-205ENST00000464053 A1BGP04217 495 aa19.53■□□□□ 0.72
GYPC-205ENST00000464053 AIMP1Q12904 312 aaKnown RBP19.53■□□□□ 0.72
GYPC-205ENST00000464053 PI4KAP1Q8N8J0 262 aa19.53■□□□□ 0.72
GYPC-205ENST00000464053 BRWD3Q6RI45 1802 aa19.53■□□□□ 0.72
GYPC-205ENST00000464053 N4BP2Q86UW6 1770 aaPredicted RBP19.53■□□□□ 0.72
GYPC-205ENST00000464053 IGHDP01880 384 aa19.52■□□□□ 0.72
GYPC-205ENST00000464053 CCT4P50991 539 aaKnown RBP19.52■□□□□ 0.72
GYPC-205ENST00000464053 XAGE3Q8WTP9 111 aa19.52■□□□□ 0.72
GYPC-205ENST00000464053 TJP1Q07157 1748 aa19.52■□□□□ 0.72
GYPC-205ENST00000464053 KDM2BQ8NHM5 1336 aa19.52■□□□□ 0.71
GYPC-205ENST00000464053 COPS6Q7L5N1 327 aa19.51■□□□□ 0.71
GYPC-205ENST00000464053 PXDNLA1KZ92 1463 aa19.51■□□□□ 0.71
GYPC-205ENST00000464053 SBF2Q86WG5 1849 aa19.51■□□□□ 0.71
GYPC-205ENST00000464053 NHSQ6T4R5 1651 aa19.51■□□□□ 0.71
GYPC-205ENST00000464053 DNAAF4Q8WXU2 420 aa19.51■□□□□ 0.71
GYPC-205ENST00000464053 C1orf115Q9H7X2 142 aa19.51■□□□□ 0.71
GYPC-205ENST00000464053 ERBB4Q15303 1308 aa19.5■□□□□ 0.71
GYPC-205ENST00000464053 RBM6P78332 1123 aaKnown RBP19.5■□□□□ 0.71
GYPC-205ENST00000464053 KSR2Q6VAB6 950 aa19.5■□□□□ 0.71
GYPC-205ENST00000464053 TEX13AQ9BXU3 409 aaPredicted RBP19.5■□□□□ 0.71
GYPC-205ENST00000464053 MAP3K2Q9Y2U5 619 aa19.5■□□□□ 0.71
GYPC-205ENST00000464053 PALLDQ8WX93 1383 aa19.49■□□□□ 0.71
GYPC-205ENST00000464053 MEIS3Q99687 375 aa19.49■□□□□ 0.71
GYPC-205ENST00000464053 BTAF1O14981 1849 aa19.49■□□□□ 0.71
GYPC-205ENST00000464053 CHMP4BQ9H444 224 aaKnown RBP19.48■□□□□ 0.71
GYPC-205ENST00000464053 RGS17Q9UGC6 210 aaPredicted RBP19.48■□□□□ 0.71
GYPC-205ENST00000464053 CYP19A1P11511 503 aaPredicted RBP19.48■□□□□ 0.71
GYPC-205ENST00000464053 BEND3Q5T5X7 828 aa19.48■□□□□ 0.71
GYPC-205ENST00000464053 LOC102724428A0A0B4J2F2 783 aa19.47■□□□□ 0.71
GYPC-205ENST00000464053 STARD3NLO95772 234 aa19.47■□□□□ 0.71
GYPC-205ENST00000464053 SIK1P57059 783 aa19.47■□□□□ 0.71
GYPC-205ENST00000464053 DDX58O95786 925 aaKnown RBP19.46■□□□□ 0.71
GYPC-205ENST00000464053 SMARCC1Q92922 1105 aaPredicted RBP19.46■□□□□ 0.71
GYPC-205ENST00000464053 ATP10DQ9P241 1426 aa19.46■□□□□ 0.71
GYPC-205ENST00000464053 ATP6V1AP38606 617 aa19.46■□□□□ 0.71
GYPC-205ENST00000464053 CENPQQ7L2Z9 268 aaPredicted RBP19.46■□□□□ 0.71
GYPC-205ENST00000464053 KRT27Q7Z3Y8 459 aa19.46■□□□□ 0.71
GYPC-205ENST00000464053 RIC3Q7Z5B4 369 aa19.46■□□□□ 0.71
GYPC-205ENST00000464053 SRCIN1Q9C0H9 1055 aa19.46■□□□□ 0.71
GYPC-205ENST00000464053 ITPK1Q13572 414 aa19.45■□□□□ 0.7
GYPC-205ENST00000464053 TTLL7Q6ZT98 887 aa19.45■□□□□ 0.7
GYPC-205ENST00000464053 ANKRD13DQ6ZTN6 518 aa19.45■□□□□ 0.7
GYPC-205ENST00000464053 ARFGEF2Q9Y6D5 1785 aa19.45■□□□□ 0.7
GYPC-205ENST00000464053 CICQ96RK0 1608 aaPredicted RBP19.44■□□□□ 0.7
GYPC-205ENST00000464053 USP44Q9H0E7 712 aa19.44■□□□□ 0.7
GYPC-205ENST00000464053 RXRBP28702 533 aa19.43■□□□□ 0.7
GYPC-205ENST00000464053 CWF19L2Q2TBE0 894 aaKnown RBP19.43■□□□□ 0.7
GYPC-205ENST00000464053 SIRT2Q8IXJ6 389 aa19.43■□□□□ 0.7
GYPC-205ENST00000464053 ZBTB1Q9Y2K1 713 aa19.43■□□□□ 0.7
GYPC-205ENST00000464053 SKAP1Q86WV1 359 aa19.42■□□□□ 0.7
GYPC-205ENST00000464053 RWDD1Q9H446 243 aaPredicted RBP19.42■□□□□ 0.7
GYPC-205ENST00000464053 NUP188Q5SRE5 1749 aa19.42■□□□□ 0.7
GYPC-205ENST00000464053 ZNF831Q5JPB2 1677 aa19.42■□□□□ 0.7
GYPC-205ENST00000464053 KCNQ4P56696 695 aa19.41■□□□□ 0.7
GYPC-205ENST00000464053 HDAC1Q13547 482 aaPredicted RBP19.41■□□□□ 0.7
GYPC-205ENST00000464053 POTEAQ6S8J7 498 aa19.41■□□□□ 0.7
GYPC-205ENST00000464053 PLBD2Q8NHP8 589 aa19.41■□□□□ 0.7
GYPC-205ENST00000464053 METTL22Q9BUU2 404 aaPredicted RBP19.41■□□□□ 0.7
GYPC-205ENST00000464053 ZNF330Q9Y3S2 320 aaPredicted RBP19.41■□□□□ 0.7
GYPC-205ENST00000464053 IGKV5-2P06315 115 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms