RNA–Protein interactions for RNA: ENST00000463343.1

SF1-212, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 983 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-212ENST00000463343 CNTNAP4Q9C0A0 1308 aa23.32■■□□□ 1.32
SF1-212ENST00000463343 KIF13BQ9NQT8 1826 aa23.31■■□□□ 1.32
SF1-212ENST00000463343 APAF1O14727 1248 aa23.31■■□□□ 1.32
SF1-212ENST00000463343 KCNQ3O43525 872 aa23.31■■□□□ 1.32
SF1-212ENST00000463343 RPS6KA4O75676 772 aa23.31■■□□□ 1.32
SF1-212ENST00000463343 TAF7Q15545 349 aaPredicted RBP23.31■■□□□ 1.32
SF1-212ENST00000463343 ZNF790Q6PG37 636 aa23.31■■□□□ 1.32
SF1-212ENST00000463343 DLG5Q8TDM6 1919 aa23.31■■□□□ 1.32
SF1-212ENST00000463343 TRIM35Q9UPQ4 493 aa23.3■■□□□ 1.32
SF1-212ENST00000463343 TTC5Q8N0Z6 440 aa23.29■■□□□ 1.32
SF1-212ENST00000463343 ARHGEF1Q92888 912 aaKnown RBP23.29■■□□□ 1.32
SF1-212ENST00000463343 CICQ96RK0 1608 aaPredicted RBP23.29■■□□□ 1.32
SF1-212ENST00000463343 MIS18AQ9NYP9 233 aa23.28■■□□□ 1.32
SF1-212ENST00000463343 SIPA1L3O60292 1781 aaPredicted RBP23.27■■□□□ 1.32
SF1-212ENST00000463343 LMOD3Q0VAK6 560 aa23.27■■□□□ 1.32
SF1-212ENST00000463343 ZNF496Q96IT1 587 aaPredicted RBP23.27■■□□□ 1.32
SF1-212ENST00000463343 PXDNLA1KZ92 1463 aa23.26■■□□□ 1.31
SF1-212ENST00000463343 COL5A3P25940 1745 aaPredicted RBP23.26■■□□□ 1.31
SF1-212ENST00000463343 HSPA6P17066 643 aa23.26■■□□□ 1.31
SF1-212ENST00000463343 RFC4P35249 363 aa23.26■■□□□ 1.31
SF1-212ENST00000463343 DNAJC10Q8IXB1 793 aa23.26■■□□□ 1.31
SF1-212ENST00000463343 FAM9BQ8IZU0 186 aa23.26■■□□□ 1.31
SF1-212ENST00000463343 KCPQ6ZWJ8 1503 aa23.26■■□□□ 1.31
SF1-212ENST00000463343 GYS1P13807 737 aa23.25■■□□□ 1.31
SF1-212ENST00000463343 VSIG10Q8N0Z9 540 aa23.25■■□□□ 1.31
SF1-212ENST00000463343 C10orf71Q711Q0 1435 aa23.25■■□□□ 1.31
SF1-212ENST00000463343 CCDC87Q9NVE4 849 aa23.24■■□□□ 1.31
SF1-212ENST00000463343 MYH14Q7Z406 1995 aaKnown RBP23.23■■□□□ 1.31
SF1-212ENST00000463343 KIAA1551Q9HCM1 1747 aa23.23■■□□□ 1.31
SF1-212ENST00000463343 CCER2I3L3R5 266 aa23.23■■□□□ 1.31
SF1-212ENST00000463343 FMNL2Q96PY5 1086 aa23.23■■□□□ 1.31
SF1-212ENST00000463343 KIF3CO14782 793 aa23.22■■□□□ 1.31
SF1-212ENST00000463343 ZNF526Q8TF50 670 aaPredicted RBP23.22■■□□□ 1.31
SF1-212ENST00000463343 PARP3Q9Y6F1 533 aa23.22■■□□□ 1.31
SF1-212ENST00000463343 A0A0G2JLW4 131 aa23.21■■□□□ 1.31
SF1-212ENST00000463343 CYP19A1P11511 503 aaPredicted RBP23.21■■□□□ 1.31
SF1-212ENST00000463343 CRKLP46109 303 aaKnown RBP23.21■■□□□ 1.31
SF1-212ENST00000463343 MIER1Q8N108 512 aa23.21■■□□□ 1.31
SF1-212ENST00000463343 WWC3Q9ULE0 1092 aa23.21■■□□□ 1.31
SF1-212ENST00000463343 HEG1Q9ULI3 1381 aa23.21■■□□□ 1.31
SF1-212ENST00000463343 C4AP0C0L4 1744 aa23.2■■□□□ 1.3
SF1-212ENST00000463343 INTS5Q6P9B9 1019 aaKnown RBP23.2■■□□□ 1.3
SF1-212ENST00000463343 TEX13AQ9BXU3 409 aaPredicted RBP23.19■■□□□ 1.3
SF1-212ENST00000463343 BCS1LQ9Y276 419 aa23.19■■□□□ 1.3
SF1-212ENST00000463343 N4BP2Q86UW6 1770 aaPredicted RBP23.19■■□□□ 1.3
SF1-212ENST00000463343 UBR2Q8IWV8 1755 aa23.19■■□□□ 1.3
SF1-212ENST00000463343 DPEP1P16444 411 aa23.18■■□□□ 1.3
SF1-212ENST00000463343 IFFO2Q5TF58 517 aa23.18■■□□□ 1.3
SF1-212ENST00000463343 BABAM1Q9NWV8 329 aa23.18■■□□□ 1.3
SF1-212ENST00000463343 TJP1Q07157 1748 aa23.18■■□□□ 1.3
SF1-212ENST00000463343 KCNA3P22001 575 aa23.17■■□□□ 1.3
SF1-212ENST00000463343 EIF4A1P60842 406 aaKnown RBP23.17■■□□□ 1.3
SF1-212ENST00000463343 BRCA1P38398 1863 aaKnown RBP23.16■■□□□ 1.3
SF1-212ENST00000463343 PRAMEF22A3QJZ6 481 aa23.16■■□□□ 1.3
SF1-212ENST00000463343 CHL1O00533 1208 aa23.16■■□□□ 1.3
SF1-212ENST00000463343 STARD3NLO95772 234 aa23.16■■□□□ 1.3
SF1-212ENST00000463343 SNRPA1P09661 255 aaKnown RBP23.16■■□□□ 1.3
SF1-212ENST00000463343 TSPYL4Q9UJ04 414 aa23.16■■□□□ 1.3
SF1-212ENST00000463343 USP16Q9Y5T5 823 aa23.16■■□□□ 1.3
SF1-212ENST00000463343 USP42Q9H9J4 1324 aaKnown RBP23.15■■□□□ 1.3
SF1-212ENST00000463343 ARHGAP27Q6ZUM4 889 aa23.15■■□□□ 1.3
SF1-212ENST00000463343 TOMM70O94826 608 aa23.14■■□□□ 1.29
SF1-212ENST00000463343 NCBP3Q53F19 620 aaKnown RBP23.14■■□□□ 1.29
SF1-212ENST00000463343 PIM2Q9P1W9 311 aa23.14■■□□□ 1.29
SF1-212ENST00000463343 LAS1LQ9Y4W2 734 aaKnown RBP23.14■■□□□ 1.29
SF1-212ENST00000463343 CCDC27Q2M243 656 aa23.13■■□□□ 1.29
SF1-212ENST00000463343 ZBTB1Q9Y2K1 713 aa23.13■■□□□ 1.29
SF1-212ENST00000463343 ARFGEF1Q9Y6D6 1849 aa23.12■■□□□ 1.29
SF1-212ENST00000463343 A1BGP04217 495 aa23.12■■□□□ 1.29
SF1-212ENST00000463343 ZNF853P0CG23 659 aa23.12■■□□□ 1.29
SF1-212ENST00000463343 TM4SF1P30408 202 aa23.12■■□□□ 1.29
SF1-212ENST00000463343 WWC1Q8IX03 1113 aa23.12■■□□□ 1.29
SF1-212ENST00000463343 CFAP44Q96MT7 982 aa23.12■■□□□ 1.29
SF1-212ENST00000463343 SALL2Q9Y467 1007 aaPredicted RBP23.12■■□□□ 1.29
SF1-212ENST00000463343 FKBP8Q14318 412 aa23.11■■□□□ 1.29
SF1-212ENST00000463343 KDM3BQ7LBC6 1761 aa23.11■■□□□ 1.29
SF1-212ENST00000463343 CANXP27824 592 aaKnown RBP23.1■■□□□ 1.29
SF1-212ENST00000463343 APLP1P51693 650 aa23.1■■□□□ 1.29
SF1-212ENST00000463343 CALD1Q05682 793 aaKnown RBP23.1■■□□□ 1.29
SF1-212ENST00000463343 SRP68Q9UHB9 627 aaKnown RBP23.1■■□□□ 1.29
SF1-212ENST00000463343 SOS1Q07889 1333 aaPredicted RBP23.09■■□□□ 1.29
SF1-212ENST00000463343 GNAI1P63096 354 aa23.08■■□□□ 1.29
SF1-212ENST00000463343 DDR1Q08345 913 aa23.08■■□□□ 1.29
SF1-212ENST00000463343 DALRD3Q5D0E6 543 aaKnown RBP23.08■■□□□ 1.29
SF1-212ENST00000463343 IFT57Q9NWB7 429 aa23.08■■□□□ 1.29
SF1-212ENST00000463343 POLRMTO00411 1230 aaKnown RBP23.07■■□□□ 1.28
SF1-212ENST00000463343 ZPR1O75312 459 aa23.07■■□□□ 1.28
SF1-212ENST00000463343 EIF5P55010 431 aaKnown RBP23.07■■□□□ 1.28
SF1-212ENST00000463343 MBIPQ9NS73 344 aa23.07■■□□□ 1.28
SF1-212ENST00000463343 C9orf131Q5VYM1 1079 aa23.06■■□□□ 1.28
SF1-212ENST00000463343 NBPF26B4DH59 902 aa23.05■■□□□ 1.28
SF1-212ENST00000463343 IL6STP40189 918 aaPredicted RBP23.05■■□□□ 1.28
SF1-212ENST00000463343 PIP4K2AP48426 406 aaPredicted RBP23.05■■□□□ 1.28
SF1-212ENST00000463343 KRT24Q2M2I5 525 aa23.05■■□□□ 1.28
SF1-212ENST00000463343 NBPF10Q6P3W6 841 aaKnown RBP23.05■■□□□ 1.28
SF1-212ENST00000463343 NBPF15Q8N660 670 aa23.05■■□□□ 1.28
SF1-212ENST00000463343 NGEFQ8N5V2 710 aa23.04■■□□□ 1.28
SF1-212ENST00000463343 RBM46Q8TBY0 533 aaKnown RBP23.04■■□□□ 1.28
SF1-212ENST00000463343 NARFQ9UHQ1 456 aa23.04■■□□□ 1.28
SF1-212ENST00000463343 WDR63Q8IWG1 891 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms