RNA–Protein interactions for RNA: ENST00000463244.6

CPSF7-209, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-209ENST00000463244 SLC39A6Q13433 755 aa28.21■■■□□ 2.11
CPSF7-209ENST00000463244 WDR90Q96KV7 1748 aa28.21■■■□□ 2.11
CPSF7-209ENST00000463244 RNF181Q9P0P0 153 aa28.2■■■□□ 2.1
CPSF7-209ENST00000463244 NRXN2Q9P2S2 1712 aa28.2■■■□□ 2.1
CPSF7-209ENST00000463244 HMOX1P09601 288 aa28.19■■■□□ 2.1
CPSF7-209ENST00000463244 NARFQ9UHQ1 456 aa28.19■■■□□ 2.1
CPSF7-209ENST00000463244 COL15A1P39059 1388 aa28.19■■■□□ 2.1
CPSF7-209ENST00000463244 KDM2BQ8NHM5 1336 aa28.18■■■□□ 2.1
CPSF7-209ENST00000463244 C16orf71Q8IYS4 520 aaPredicted RBP28.18■■■□□ 2.1
CPSF7-209ENST00000463244 ZBTB1Q9Y2K1 713 aa28.17■■■□□ 2.1
CPSF7-209ENST00000463244 UBR2Q8IWV8 1755 aa28.16■■■□□ 2.1
CPSF7-209ENST00000463244 TNRC6CQ9HCJ0 1690 aaKnown RBP28.16■■■□□ 2.1
CPSF7-209ENST00000463244 NFIXQ14938 502 aa28.16■■■□□ 2.1
CPSF7-209ENST00000463244 MTHFSDQ2M296 383 aaKnown RBP28.16■■■□□ 2.1
CPSF7-209ENST00000463244 DLEC1Q9Y238 1755 aa28.16■■■□□ 2.1
CPSF7-209ENST00000463244 VSIG10Q8N0Z9 540 aa28.15■■■□□ 2.1
CPSF7-209ENST00000463244 FSTL1Q12841 308 aa28.14■■■□□ 2.1
CPSF7-209ENST00000463244 BCL2L12Q9HB09 334 aa28.14■■■□□ 2.1
CPSF7-209ENST00000463244 KIF7Q2M1P5 1343 aa28.14■■■□□ 2.09
CPSF7-209ENST00000463244 RRAGCQ9HB90 399 aa28.12■■■□□ 2.09
CPSF7-209ENST00000463244 DIAPH1O60610 1272 aaKnown RBP28.11■■■□□ 2.09
CPSF7-209ENST00000463244 ZC3H4Q9UPT8 1303 aaKnown RBP28.11■■■□□ 2.09
CPSF7-209ENST00000463244 PER1O15534 1290 aaPredicted RBP28.1■■■□□ 2.09
CPSF7-209ENST00000463244 SERPINB2P05120 415 aa28.1■■■□□ 2.09
CPSF7-209ENST00000463244 RASSF7Q02833 373 aa28.1■■■□□ 2.09
CPSF7-209ENST00000463244 CCER1Q8TC90 406 aaPredicted RBP28.1■■■□□ 2.09
CPSF7-209ENST00000463244 HTRA3P83110 453 aa28.08■■■□□ 2.09
CPSF7-209ENST00000463244 CANXP27824 592 aaKnown RBP28.07■■■□□ 2.08
CPSF7-209ENST00000463244 KLRG1Q96E93 195 aa28.07■■■□□ 2.08
CPSF7-209ENST00000463244 CCDC88AQ3V6T2 1871 aa28.06■■■□□ 2.08
CPSF7-209ENST00000463244 LMNB1P20700 586 aa28.06■■■□□ 2.08
CPSF7-209ENST00000463244 CC2D1BQ5T0F9 858 aaKnown RBP28.06■■■□□ 2.08
CPSF7-209ENST00000463244 TTLL6Q8N841 843 aa28.06■■■□□ 2.08
CPSF7-209ENST00000463244 CARMIL3Q8ND23 1372 aa28.06■■■□□ 2.08
CPSF7-209ENST00000463244 STARD3NLO95772 234 aa28.05■■■□□ 2.08
CPSF7-209ENST00000463244 PRELPP51888 382 aa28.05■■■□□ 2.08
CPSF7-209ENST00000463244 EIF5P55010 431 aaKnown RBP28.05■■■□□ 2.08
CPSF7-209ENST00000463244 TTC5Q8N0Z6 440 aa28.05■■■□□ 2.08
CPSF7-209ENST00000463244 COL3A1P02461 1466 aaPredicted RBP28.04■■■□□ 2.08
CPSF7-209ENST00000463244 C2CD5Q86YS7 1000 aa28.04■■■□□ 2.08
CPSF7-209ENST00000463244 SIPA1L3O60292 1781 aaPredicted RBP28.03■■■□□ 2.08
CPSF7-209ENST00000463244 TIAM2Q8IVF5 1701 aa28.03■■■□□ 2.08
CPSF7-209ENST00000463244 ANKRD31Q8N7Z5 1873 aa28.02■■■□□ 2.08
CPSF7-209ENST00000463244 A0A087WZG4 1122 aa28.02■■■□□ 2.08
CPSF7-209ENST00000463244 H0YIN7 160 aa28.02■■■□□ 2.08
CPSF7-209ENST00000463244 JMYQ8N9B5 988 aa28.02■■■□□ 2.08
CPSF7-209ENST00000463244 SMC1BQ8NDV3 1235 aa28.02■■■□□ 2.08
CPSF7-209ENST00000463244 SCN7AQ01118 1682 aa28.02■■■□□ 2.08
CPSF7-209ENST00000463244 GLTPD2A6NH11 291 aa28.01■■■□□ 2.07
CPSF7-209ENST00000463244 BICDL1Q6ZP65 573 aa28.01■■■□□ 2.07
CPSF7-209ENST00000463244 ZNF496Q96IT1 587 aaPredicted RBP28.01■■■□□ 2.07
CPSF7-209ENST00000463244 HEG1Q9ULI3 1381 aa28■■■□□ 2.07
CPSF7-209ENST00000463244 ZNF790Q6PG37 636 aa28■■■□□ 2.07
CPSF7-209ENST00000463244 IL17REQ8NFR9 667 aa28■■■□□ 2.07
CPSF7-209ENST00000463244 NFKBIEO00221 500 aa27.99■■■□□ 2.07
CPSF7-209ENST00000463244 GNAT3A8MTJ3 354 aa27.98■■■□□ 2.07
CPSF7-209ENST00000463244 TEFQ10587 303 aa27.98■■■□□ 2.07
CPSF7-209ENST00000463244 TBC1D9BQ66K14 1250 aa27.98■■■□□ 2.07
CPSF7-209ENST00000463244 GAS2L2Q8NHY3 880 aa27.98■■■□□ 2.07
CPSF7-209ENST00000463244 TEX13AQ9BXU3 409 aaPredicted RBP27.98■■■□□ 2.07
CPSF7-209ENST00000463244 NPC1L1Q9UHC9 1359 aa27.98■■■□□ 2.07
CPSF7-209ENST00000463244 VEGFAP15692 232 aaPredicted RBP27.97■■■□□ 2.07
CPSF7-209ENST00000463244 COL11A2P13942 1736 aaPredicted RBP27.96■■■□□ 2.07
CPSF7-209ENST00000463244 U2SURPO15042 1029 aaKnown RBP27.96■■■□□ 2.07
CPSF7-209ENST00000463244 PDZRN3Q9UPQ7 1066 aa27.96■■■□□ 2.07
CPSF7-209ENST00000463244 DICER1Q9UPY3 1922 aaKnown RBP27.95■■■□□ 2.06
CPSF7-209ENST00000463244 IL6STP40189 918 aaPredicted RBP27.95■■■□□ 2.06
CPSF7-209ENST00000463244 BRIP1Q9BX63 1249 aa27.95■■■□□ 2.06
CPSF7-209ENST00000463244 FER1L6Q2WGJ9 1857 aa27.95■■■□□ 2.06
CPSF7-209ENST00000463244 PRR5LQ6MZQ0 368 aa27.94■■■□□ 2.06
CPSF7-209ENST00000463244 TBC1D2BQ9UPU7 963 aa27.94■■■□□ 2.06
CPSF7-209ENST00000463244 PDE6BP35913 854 aa27.93■■■□□ 2.06
CPSF7-209ENST00000463244 ZNF330Q9Y3S2 320 aaPredicted RBP27.93■■■□□ 2.06
CPSF7-209ENST00000463244 CEMIPQ8WUJ3 1361 aa27.92■■■□□ 2.06
CPSF7-209ENST00000463244 ZNF622Q969S3 477 aaKnown RBP eCLIP27.92■■■□□ 2.062e-6■□□□□ 9.3
CPSF7-209ENST00000463244 FMNL2Q96PY5 1086 aa27.92■■■□□ 2.06
CPSF7-209ENST00000463244 CCDC24Q8N4L8 307 aa27.9■■■□□ 2.06
CPSF7-209ENST00000463244 BCORQ6W2J9 1755 aa27.89■■■□□ 2.06
CPSF7-209ENST00000463244 POTECB2RU33 542 aa27.89■■■□□ 2.06
CPSF7-209ENST00000463244 C21orf2O43822 256 aa27.89■■■□□ 2.06
CPSF7-209ENST00000463244 A1BGP04217 495 aa27.89■■■□□ 2.06
CPSF7-209ENST00000463244 CAMTA2O94983 1202 aa27.88■■■□□ 2.05
CPSF7-209ENST00000463244 CNGB1Q14028 1251 aaPredicted RBP27.88■■■□□ 2.05
CPSF7-209ENST00000463244 COL13A1Q5TAT6 717 aaPredicted RBP27.88■■■□□ 2.05
CPSF7-209ENST00000463244 DPY19L2Q6NUT2 758 aa27.88■■■□□ 2.05
CPSF7-209ENST00000463244 NPM2Q86SE8 214 aaKnown RBP27.87■■■□□ 2.05
CPSF7-209ENST00000463244 CNBD1Q8NA66 436 aa27.87■■■□□ 2.05
CPSF7-209ENST00000463244 SETDB2Q96T68 719 aa27.87■■■□□ 2.05
CPSF7-209ENST00000463244 ZNF219Q9P2Y4 722 aaPredicted RBP27.87■■■□□ 2.05
CPSF7-209ENST00000463244 CACNA1SQ13698 1873 aa27.87■■■□□ 2.05
CPSF7-209ENST00000463244 SLX4Q8IY92 1834 aa27.86■■■□□ 2.05
CPSF7-209ENST00000463244 KCNQ3O43525 872 aa27.86■■■□□ 2.05
CPSF7-209ENST00000463244 ERFEQ4G0M1 354 aa27.86■■■□□ 2.05
CPSF7-209ENST00000463244 PHACTR3Q96KR7 559 aa27.86■■■□□ 2.05
CPSF7-209ENST00000463244 BTBD11A6QL63 1104 aa27.85■■■□□ 2.05
CPSF7-209ENST00000463244 ARFGEF2Q9Y6D5 1785 aa27.85■■■□□ 2.05
CPSF7-209ENST00000463244 LTBP3Q9NS15 1303 aa27.85■■■□□ 2.05
CPSF7-209ENST00000463244 RSPH6AQ9H0K4 717 aa27.84■■■□□ 2.05
CPSF7-209ENST00000463244 PRKAR2BP31323 418 aa27.83■■■□□ 2.05
CPSF7-209ENST00000463244 ST5P78524 1137 aa27.83■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms