RNA–Protein interactions for RNA: ENST00000462815.5

PTPN7-204, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,147 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-204ENST00000462815 BCL2L12Q9HB09 334 aa15.23■□□□□ 0.03
PTPN7-204ENST00000462815 SIPA1L3O60292 1781 aaPredicted RBP15.23■□□□□ 0.03
PTPN7-204ENST00000462815 TOMM70O94826 608 aa15.22■□□□□ 0.03
PTPN7-204ENST00000462815 HMOX1P09601 288 aa15.22■□□□□ 0.03
PTPN7-204ENST00000462815 MTHFSDQ2M296 383 aaKnown RBP15.22■□□□□ 0.03
PTPN7-204ENST00000462815 C9orf131Q5VYM1 1079 aa15.22■□□□□ 0.03
PTPN7-204ENST00000462815 PIM2Q9P1W9 311 aa15.22■□□□□ 0.03
PTPN7-204ENST00000462815 ZBTB1Q9Y2K1 713 aa15.22■□□□□ 0.03
PTPN7-204ENST00000462815 WDR90Q96KV7 1748 aa15.22■□□□□ 0.03
PTPN7-204ENST00000462815 COL15A1P39059 1388 aa15.22■□□□□ 0.03
PTPN7-204ENST00000462815 SCN7AQ01118 1682 aa15.21■□□□□ 0.03
PTPN7-204ENST00000462815 TNRC6CQ9HCJ0 1690 aaKnown RBP15.2■□□□□ 0.02
PTPN7-204ENST00000462815 PRELPP51888 382 aa15.2■□□□□ 0.02
PTPN7-204ENST00000462815 NFIXQ14938 502 aa15.2■□□□□ 0.02
PTPN7-204ENST00000462815 DALRD3Q5D0E6 543 aaKnown RBP15.2■□□□□ 0.02
PTPN7-204ENST00000462815 NARFQ9UHQ1 456 aa15.2■□□□□ 0.02
PTPN7-204ENST00000462815 CARMIL3Q8ND23 1372 aa15.2■□□□□ 0.02
PTPN7-204ENST00000462815 APLP1P51693 650 aa15.19■□□□□ 0.02
PTPN7-204ENST00000462815 VSIG10Q8N0Z9 540 aa15.19■□□□□ 0.02
PTPN7-204ENST00000462815 RBM46Q8TBY0 533 aaKnown RBP15.18■□□□□ 0.02
PTPN7-204ENST00000462815 NPC1L1Q9UHC9 1359 aa15.18■□□□□ 0.02
PTPN7-204ENST00000462815 ANKRD31Q8N7Z5 1873 aa15.18■□□□□ 0.02
PTPN7-204ENST00000462815 DIAPH1O60610 1272 aaKnown RBP15.17■□□□□ 0.02
PTPN7-204ENST00000462815 COL11A2P13942 1736 aaPredicted RBP15.17■□□□□ 0.02
PTPN7-204ENST00000462815 ZPR1O75312 459 aa15.16■□□□□ 0.02
PTPN7-204ENST00000462815 EIF5P55010 431 aaKnown RBP15.16■□□□□ 0.02
PTPN7-204ENST00000462815 RNF181Q9P0P0 153 aa15.16■□□□□ 0.02
PTPN7-204ENST00000462815 TIAM2Q8IVF5 1701 aa15.15■□□□□ 0.02
PTPN7-204ENST00000462815 RASSF7Q02833 373 aa15.15■□□□□ 0.02
PTPN7-204ENST00000462815 IL17REQ8NFR9 667 aa15.15■□□□□ 0.02
PTPN7-204ENST00000462815 CCER1Q8TC90 406 aaPredicted RBP15.15■□□□□ 0.02
PTPN7-204ENST00000462815 CEMIPQ8WUJ3 1361 aa15.14■□□□□ 0.01
PTPN7-204ENST00000462815 SERPINB2P05120 415 aa15.14■□□□□ 0.01
PTPN7-204ENST00000462815 CC2D1BQ5T0F9 858 aaKnown RBP15.14■□□□□ 0.01
PTPN7-204ENST00000462815 ZC3H4Q9UPT8 1303 aaKnown RBP15.14■□□□□ 0.01
PTPN7-204ENST00000462815 BCORQ6W2J9 1755 aa15.13■□□□□ 0.01
PTPN7-204ENST00000462815 HEG1Q9ULI3 1381 aa15.13■□□□□ 0.01
PTPN7-204ENST00000462815 ZNF496Q96IT1 587 aaPredicted RBP15.13■□□□□ 0.01
PTPN7-204ENST00000462815 NFKBIEO00221 500 aa15.12■□□□□ 0.01
PTPN7-204ENST00000462815 HTRA3P83110 453 aa15.12■□□□□ 0.01
PTPN7-204ENST00000462815 FSTL1Q12841 308 aa15.12■□□□□ 0.01
PTPN7-204ENST00000462815 KDM2BQ8NHM5 1336 aa15.12■□□□□ 0.01
PTPN7-204ENST00000462815 CANXP27824 592 aaKnown RBP15.11■□□□□ 0.01
PTPN7-204ENST00000462815 ZNF790Q6PG37 636 aa15.11■□□□□ 0.01
PTPN7-204ENST00000462815 RRAGCQ9HB90 399 aa15.11■□□□□ 0.01
PTPN7-204ENST00000462815 FER1L6Q2WGJ9 1857 aa15.1■□□□□ 0.01
PTPN7-204ENST00000462815 TBC1D9BQ66K14 1250 aa15.1■□□□□ 0.01
PTPN7-204ENST00000462815 JMYQ8N9B5 988 aa15.1■□□□□ 0.01
PTPN7-204ENST00000462815 GNAT3A8MTJ3 354 aa15.09■□□□□ 0.01
PTPN7-204ENST00000462815 LMNB1P20700 586 aa15.09■□□□□ 0.01
PTPN7-204ENST00000462815 C2CD5Q86YS7 1000 aa15.09■□□□□ 0.01
PTPN7-204ENST00000462815 TTLL6Q8N841 843 aa15.09■□□□□ 0.01
PTPN7-204ENST00000462815 KLRG1Q96E93 195 aa15.09■□□□□ 0.01
PTPN7-204ENST00000462815 ARFGEF2Q9Y6D5 1785 aa15.08■□□□□ 0.01
PTPN7-204ENST00000462815 CCDC88AQ3V6T2 1871 aa15.08■□□□□ 0.01
PTPN7-204ENST00000462815 GLTPD2A6NH11 291 aa15.08■□□□□ 0
PTPN7-204ENST00000462815 POTECB2RU33 542 aa15.08■□□□□ 0
PTPN7-204ENST00000462815 KCNQ3O43525 872 aa15.08■□□□□ 0
PTPN7-204ENST00000462815 STARD3NLO95772 234 aa15.08■□□□□ 0
PTPN7-204ENST00000462815 PRR5LQ6MZQ0 368 aa15.08■□□□□ 0
PTPN7-204ENST00000462815 TTC5Q8N0Z6 440 aa15.08■□□□□ 0
PTPN7-204ENST00000462815 GAS2L2Q8NHY3 880 aa15.08■□□□□ 0
PTPN7-204ENST00000462815 PHACTR3Q96KR7 559 aa15.08■□□□□ 0
PTPN7-204ENST00000462815 RSPH6AQ9H0K4 717 aa15.08■□□□□ 0
PTPN7-204ENST00000462815 A0A087WZG4 1122 aa15.07■□□□□ 0
PTPN7-204ENST00000462815 CAMTA2O94983 1202 aa15.07■□□□□ 0
PTPN7-204ENST00000462815 IL6STP40189 918 aaPredicted RBP15.07■□□□□ 0
PTPN7-204ENST00000462815 DICER1Q9UPY3 1922 aaKnown RBP15.07■□□□□ 0
PTPN7-204ENST00000462815 U2SURPO15042 1029 aaKnown RBP15.06■□□□□ 0
PTPN7-204ENST00000462815 A1BGP04217 495 aa15.06■□□□□ 0
PTPN7-204ENST00000462815 BICDL1Q6ZP65 573 aa15.06■□□□□ 0
PTPN7-204ENST00000462815 C16orf71Q8IYS4 520 aaPredicted RBP15.06■□□□□ 0
PTPN7-204ENST00000462815 BRIP1Q9BX63 1249 aa15.06■□□□□ 0
PTPN7-204ENST00000462815 TBC1D2BQ9UPU7 963 aa15.06■□□□□ 0
PTPN7-204ENST00000462815 H0YIN7 160 aa15.05■□□□□ -0
PTPN7-204ENST00000462815 TEFQ10587 303 aa15.05■□□□□ -0
PTPN7-204ENST00000462815 TEX13AQ9BXU3 409 aaPredicted RBP15.05■□□□□ -0
PTPN7-204ENST00000462815 SLX4Q8IY92 1834 aa15.04■□□□□ -0
PTPN7-204ENST00000462815 PRAMEF22A3QJZ6 481 aa15.04■□□□□ -0
PTPN7-204ENST00000462815 CCDC24Q8N4L8 307 aa15.04■□□□□ -0
PTPN7-204ENST00000462815 SMC1BQ8NDV3 1235 aa15.04■□□□□ -0
PTPN7-204ENST00000462815 FMNL2Q96PY5 1086 aa15.04■□□□□ -0
PTPN7-204ENST00000462815 LTBP3Q9NS15 1303 aa15.03■□□□□ -0
PTPN7-204ENST00000462815 PRKAR2BP31323 418 aa15.03■□□□□ -0
PTPN7-204ENST00000462815 PDZRN3Q9UPQ7 1066 aa15.03■□□□□ -0
PTPN7-204ENST00000462815 C21orf2O43822 256 aa15.02■□□□□ -0
PTPN7-204ENST00000462815 VEGFAP15692 232 aaPredicted RBP15.02■□□□□ -0
PTPN7-204ENST00000462815 PDE6BP35913 854 aa15.02■□□□□ -0
PTPN7-204ENST00000462815 USP16Q9Y5T5 823 aa15.02■□□□□ -0
PTPN7-204ENST00000462815 CACNA1SQ13698 1873 aa15.01□□□□□ -0.01
PTPN7-204ENST00000462815 BTBD11A6QL63 1104 aa15.01□□□□□ -0.01
PTPN7-204ENST00000462815 SRGNP10124 158 aa15.01□□□□□ -0.01
PTPN7-204ENST00000462815 PIP4K2AP48426 406 aaPredicted RBP15□□□□□ -0.01
PTPN7-204ENST00000462815 CNGB1Q14028 1251 aaPredicted RBP15□□□□□ -0.01
PTPN7-204ENST00000462815 COL13A1Q5TAT6 717 aaPredicted RBP15□□□□□ -0.01
PTPN7-204ENST00000462815 CNBD1Q8NA66 436 aa15□□□□□ -0.01
PTPN7-204ENST00000462815 C7orf43Q8WVR3 580 aa15□□□□□ -0.01
PTPN7-204ENST00000462815 ZNF622Q969S3 477 aaKnown RBP eCLIP15□□□□□ -0.011e-6■□□□□ 10.3
PTPN7-204ENST00000462815 LAMB4A4D0S4 1761 aa15□□□□□ -0.01
PTPN7-204ENST00000462815 SNED1Q8TER0 1413 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms