RNA–Protein interactions for RNA: ENST00000462165.2

CBX3-205, Transcript of chromobox 3, humanhuman

TSL 3

Gene CBX3, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-205ENST00000462165 PANK3Q9H999 370 aa14.88□□□□□ -0.03
CBX3-205ENST00000462165 NRXN2Q9P2S2 1712 aa14.88□□□□□ -0.03
CBX3-205ENST00000462165 SULT6B1Q6IMI4 303 aa14.87□□□□□ -0.03
CBX3-205ENST00000462165 RRAGCQ9HB90 399 aa14.87□□□□□ -0.03
CBX3-205ENST00000462165 CCDC88AQ3V6T2 1871 aa14.86□□□□□ -0.03
CBX3-205ENST00000462165 HTRA3P83110 453 aa14.86□□□□□ -0.03
CBX3-205ENST00000462165 ZC3H4Q9UPT8 1303 aaKnown RBP14.86□□□□□ -0.03
CBX3-205ENST00000462165 ZPR1O75312 459 aa14.85□□□□□ -0.03
CBX3-205ENST00000462165 TRIM26Q12899 539 aaPredicted RBP14.85□□□□□ -0.03
CBX3-205ENST00000462165 AKAP4Q5JQC9 854 aa14.85□□□□□ -0.03
CBX3-205ENST00000462165 USPL1Q5W0Q7 1092 aa14.85□□□□□ -0.03
CBX3-205ENST00000462165 MORC1Q86VD1 984 aa14.85□□□□□ -0.03
CBX3-205ENST00000462165 SOS1Q07889 1333 aaPredicted RBP14.85□□□□□ -0.03
CBX3-205ENST00000462165 MRC1P22897 1456 aa14.84□□□□□ -0.03
CBX3-205ENST00000462165 IL13P35225 146 aa14.84□□□□□ -0.03
CBX3-205ENST00000462165 DNAJC10Q8IXB1 793 aa14.84□□□□□ -0.03
CBX3-205ENST00000462165 SLC52A2Q9HAB3 445 aa14.84□□□□□ -0.03
CBX3-205ENST00000462165 EIF4G2P78344 907 aaKnown RBP eCLIP14.83□□□□□ -0.04
CBX3-205ENST00000462165 SMC1BQ8NDV3 1235 aa14.83□□□□□ -0.04
CBX3-205ENST00000462165 CLSPNQ9HAW4 1339 aa14.83□□□□□ -0.04
CBX3-205ENST00000462165 TIAM2Q8IVF5 1701 aa14.83□□□□□ -0.04
CBX3-205ENST00000462165 CYP19A1P11511 503 aaPredicted RBP14.82□□□□□ -0.04
CBX3-205ENST00000462165 RASSF7Q02833 373 aa14.82□□□□□ -0.04
CBX3-205ENST00000462165 NFIXQ14938 502 aa14.82□□□□□ -0.04
CBX3-205ENST00000462165 COL13A1Q5TAT6 717 aaPredicted RBP14.82□□□□□ -0.04
CBX3-205ENST00000462165 NARFQ9UHQ1 456 aa14.82□□□□□ -0.04
CBX3-205ENST00000462165 UBR2Q8IWV8 1755 aa14.82□□□□□ -0.04
CBX3-205ENST00000462165 COL15A1P39059 1388 aa14.82□□□□□ -0.04
CBX3-205ENST00000462165 HSPA5P11021 654 aaKnown RBP14.81□□□□□ -0.04
CBX3-205ENST00000462165 LMNB1P20700 586 aa14.81□□□□□ -0.04
CBX3-205ENST00000462165 LGR6Q9HBX8 967 aa14.81□□□□□ -0.04
CBX3-205ENST00000462165 DICER1Q9UPY3 1922 aaKnown RBP14.8□□□□□ -0.04
CBX3-205ENST00000462165 GLTPD2A6NH11 291 aa14.8□□□□□ -0.04
CBX3-205ENST00000462165 RNMTO43148 476 aaKnown RBP14.8□□□□□ -0.04
CBX3-205ENST00000462165 SERPINB2P05120 415 aa14.8□□□□□ -0.04
CBX3-205ENST00000462165 PRELPP51888 382 aa14.8□□□□□ -0.04
CBX3-205ENST00000462165 SLC39A6Q13433 755 aa14.8□□□□□ -0.04
CBX3-205ENST00000462165 ZBTB1Q9Y2K1 713 aa14.8□□□□□ -0.04
CBX3-205ENST00000462165 VSIG10Q8N0Z9 540 aa14.79□□□□□ -0.04
CBX3-205ENST00000462165 TTLL6Q8N841 843 aa14.79□□□□□ -0.04
CBX3-205ENST00000462165 BCL2L12Q9HB09 334 aa14.79□□□□□ -0.04
CBX3-205ENST00000462165 ANKRD31Q8N7Z5 1873 aa14.78□□□□□ -0.04
CBX3-205ENST00000462165 VEGFAP15692 232 aaPredicted RBP14.78□□□□□ -0.04
CBX3-205ENST00000462165 KNSTRNQ9Y448 316 aa14.78□□□□□ -0.04
CBX3-205ENST00000462165 FER1L6Q2WGJ9 1857 aa14.77□□□□□ -0.05
CBX3-205ENST00000462165 CARMIL3Q8ND23 1372 aa14.76□□□□□ -0.05
CBX3-205ENST00000462165 H0YIN7 160 aa14.76□□□□□ -0.05
CBX3-205ENST00000462165 NFKBIEO00221 500 aa14.76□□□□□ -0.05
CBX3-205ENST00000462165 C2CD5Q86YS7 1000 aa14.76□□□□□ -0.05
CBX3-205ENST00000462165 SCN7AQ01118 1682 aa14.76□□□□□ -0.05
CBX3-205ENST00000462165 HMOX1P09601 288 aa14.75□□□□□ -0.05
CBX3-205ENST00000462165 MTHFSDQ2M296 383 aaKnown RBP14.75□□□□□ -0.05
CBX3-205ENST00000462165 AMER1Q5JTC6 1135 aaPredicted RBP14.75□□□□□ -0.05
CBX3-205ENST00000462165 COL11A2P13942 1736 aaPredicted RBP14.75□□□□□ -0.05
CBX3-205ENST00000462165 EIF5P55010 431 aaKnown RBP14.74□□□□□ -0.05
CBX3-205ENST00000462165 TNS4Q8IZW8 715 aa14.74□□□□□ -0.05
CBX3-205ENST00000462165 PDZRN3Q9UPQ7 1066 aa14.74□□□□□ -0.05
CBX3-205ENST00000462165 SIPA1L3O60292 1781 aaPredicted RBP14.74□□□□□ -0.05
CBX3-205ENST00000462165 A0A087WZG4 1122 aa14.73□□□□□ -0.05
CBX3-205ENST00000462165 POTECB2RU33 542 aa14.73□□□□□ -0.05
CBX3-205ENST00000462165 STARD3NLO95772 234 aa14.73□□□□□ -0.05
CBX3-205ENST00000462165 CANXP27824 592 aaKnown RBP14.73□□□□□ -0.05
CBX3-205ENST00000462165 CACNA1SQ13698 1873 aa14.72□□□□□ -0.05
CBX3-205ENST00000462165 HSPA1AP0DMV8 641 aaKnown RBP14.72□□□□□ -0.05
CBX3-205ENST00000462165 HSPA1BP0DMV9 641 aaKnown RBP14.72□□□□□ -0.05
CBX3-205ENST00000462165 DPY19L2Q6NUT2 758 aa14.72□□□□□ -0.05
CBX3-205ENST00000462165 BICDL1Q6ZP65 573 aa14.72□□□□□ -0.05
CBX3-205ENST00000462165 ARFGEF2Q9Y6D5 1785 aa14.72□□□□□ -0.05
CBX3-205ENST00000462165 DIAPH1O60610 1272 aaKnown RBP14.71□□□□□ -0.05
CBX3-205ENST00000462165 TBC1D9BQ66K14 1250 aa14.71□□□□□ -0.05
CBX3-205ENST00000462165 TTC5Q8N0Z6 440 aa14.71□□□□□ -0.05
CBX3-205ENST00000462165 BRIP1Q9BX63 1249 aa14.71□□□□□ -0.05
CBX3-205ENST00000462165 HEG1Q9ULI3 1381 aa14.71□□□□□ -0.06
CBX3-205ENST00000462165 CAPN15O75808 1086 aa14.7□□□□□ -0.06
CBX3-205ENST00000462165 PDE6BP35913 854 aa14.7□□□□□ -0.06
CBX3-205ENST00000462165 ZNF622Q969S3 477 aaKnown RBP eCLIP14.7□□□□□ -0.062e-21■■□□□ 12.9
CBX3-205ENST00000462165 TEX13AQ9BXU3 409 aaPredicted RBP14.7□□□□□ -0.06
CBX3-205ENST00000462165 BCORQ6W2J9 1755 aa14.7□□□□□ -0.06
CBX3-205ENST00000462165 LTBP3Q9NS15 1303 aa14.69□□□□□ -0.06
CBX3-205ENST00000462165 SLX4Q8IY92 1834 aa14.69□□□□□ -0.06
CBX3-205ENST00000462165 C21orf2O43822 256 aa14.69□□□□□ -0.06
CBX3-205ENST00000462165 ERFEQ4G0M1 354 aa14.69□□□□□ -0.06
CBX3-205ENST00000462165 PRR5LQ6MZQ0 368 aa14.69□□□□□ -0.06
CBX3-205ENST00000462165 ZNF496Q96IT1 587 aaPredicted RBP14.69□□□□□ -0.06
CBX3-205ENST00000462165 PCGF6Q9BYE7 350 aa14.69□□□□□ -0.06
CBX3-205ENST00000462165 IL6STP40189 918 aaPredicted RBP14.68□□□□□ -0.06
CBX3-205ENST00000462165 ZNF790Q6PG37 636 aa14.68□□□□□ -0.06
CBX3-205ENST00000462165 TBC1D2BQ9UPU7 963 aa14.68□□□□□ -0.06
CBX3-205ENST00000462165 TEFQ10587 303 aa14.67□□□□□ -0.06
CBX3-205ENST00000462165 IL17REQ8NFR9 667 aa14.67□□□□□ -0.06
CBX3-205ENST00000462165 SCN4AP35499 1836 aa14.66□□□□□ -0.06
CBX3-205ENST00000462165 COL3A1P02461 1466 aaPredicted RBP14.66□□□□□ -0.06
CBX3-205ENST00000462165 GNAT3A8MTJ3 354 aa14.66□□□□□ -0.06
CBX3-205ENST00000462165 PER1O15534 1290 aaPredicted RBP14.66□□□□□ -0.06
CBX3-205ENST00000462165 CHADLQ6NUI6 762 aa14.66□□□□□ -0.06
CBX3-205ENST00000462165 CCDC24Q8N4L8 307 aa14.66□□□□□ -0.06
CBX3-205ENST00000462165 GAS2L2Q8NHY3 880 aa14.66□□□□□ -0.06
CBX3-205ENST00000462165 TAOK3Q9H2K8 898 aa14.66□□□□□ -0.06
CBX3-205ENST00000462165 CREBZFQ9NS37 354 aa14.66□□□□□ -0.06
CBX3-205ENST00000462165 ZNF219Q9P2Y4 722 aaPredicted RBP14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms