RNA–Protein interactions for RNA: ENST00000461903.1

HLA-A-205, Transcript of major histocompatibility complex, class I, A, human

Gene HLA-A, Length 1,352 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HLA-A-205	ENST00000461903	EXOSC9	Q06265	439 aa	Known RBP	28.94	■■■□□ 2.22
HLA-A-205	ENST00000461903	DCAF8L1	A6NGE4	600 aa		28.93	■■■□□ 2.22
HLA-A-205	ENST00000461903	HOXB7	P09629	217 aa		28.93	■■■□□ 2.22
HLA-A-205	ENST00000461903	DUSP27	Q5VZP5	1158 aa		28.93	■■■□□ 2.22
HLA-A-205	ENST00000461903	C4B	P0C0L5	1744 aa		28.92	■■■□□ 2.22
HLA-A-205	ENST00000461903	PRAMEF22	A3QJZ6	481 aa		28.92	■■■□□ 2.22
HLA-A-205	ENST00000461903	STARD3NL	O95772	234 aa		28.92	■■■□□ 2.22
HLA-A-205	ENST00000461903	TRMT2A	Q8IZ69	625 aa	Known RBP	28.92	■■■□□ 2.22
HLA-A-205	ENST00000461903	C8orf58	Q8NAV2	365 aa		28.92	■■■□□ 2.22
HLA-A-205	ENST00000461903	LINC00116	Q8NCU8	138 aa		28.92	■■■□□ 2.22
HLA-A-205	ENST00000461903	ELL2	O00472	640 aa	Predicted RBP	28.91	■■■□□ 2.22
HLA-A-205	ENST00000461903	SOS1	Q07889	1333 aa	Predicted RBP	28.91	■■■□□ 2.22
HLA-A-205	ENST00000461903	TWISTNB	Q3B726	338 aa	Predicted RBP	28.9	■■■□□ 2.22
HLA-A-205	ENST00000461903	USP16	Q9Y5T5	823 aa		28.89	■■■□□ 2.22
HLA-A-205	ENST00000461903	CYP19A1	P11511	503 aa	Predicted RBP	28.88	■■■□□ 2.21
HLA-A-205	ENST00000461903	EIF2S2	P20042	333 aa	Known RBP	28.88	■■■□□ 2.21
HLA-A-205	ENST00000461903	HDGFL1	Q5TGJ6	251 aa		28.88	■■■□□ 2.21
HLA-A-205	ENST00000461903	TSPYL6	Q8N831	410 aa		28.88	■■■□□ 2.21
HLA-A-205	ENST00000461903	AK7	Q96M32	723 aa		28.88	■■■□□ 2.21
HLA-A-205	ENST00000461903	CHMP4A	Q9BY43	222 aa		28.88	■■■□□ 2.21
HLA-A-205	ENST00000461903	CNTNAP4	Q9C0A0	1308 aa		28.87	■■■□□ 2.21
HLA-A-205	ENST00000461903	CRKL	P46109	303 aa	Known RBP	28.87	■■■□□ 2.21
HLA-A-205	ENST00000461903	CCDC87	Q9NVE4	849 aa		28.86	■■■□□ 2.21
HLA-A-205	ENST00000461903	NECTIN2	Q92692	538 aa		28.85	■■■□□ 2.21
HLA-A-205	ENST00000461903	PDGFD	Q9GZP0	370 aa	Predicted RBP	28.85	■■■□□ 2.21
HLA-A-205	ENST00000461903	STK32B	Q9NY57	414 aa		28.85	■■■□□ 2.21
HLA-A-205	ENST00000461903	RC3H1	Q5TC82	1133 aa	Known RBP	28.83	■■■□□ 2.21
HLA-A-205	ENST00000461903	MYH14	Q7Z406	1995 aa	Known RBP	28.82	■■■□□ 2.2
HLA-A-205	ENST00000461903	ERBB4	Q15303	1308 aa		28.82	■■■□□ 2.2
HLA-A-205	ENST00000461903	ZBTB1	Q9Y2K1	713 aa		28.82	■■■□□ 2.2
HLA-A-205	ENST00000461903	GNPAT	O15228	680 aa		28.81	■■■□□ 2.2
HLA-A-205	ENST00000461903	A1BG	P04217	495 aa		28.81	■■■□□ 2.2
HLA-A-205	ENST00000461903	PTGER2	P43116	358 aa		28.81	■■■□□ 2.2
HLA-A-205	ENST00000461903	CCDC30	Q5VVM6	783 aa		28.81	■■■□□ 2.2
HLA-A-205	ENST00000461903	VAMP4	O75379	141 aa		28.8	■■■□□ 2.2
HLA-A-205	ENST00000461903	ZBTB7A	O95365	584 aa		28.8	■■■□□ 2.2
HLA-A-205	ENST00000461903	CT47B1	P0C2W7	299 aa	Predicted RBP	28.8	■■■□□ 2.2
HLA-A-205	ENST00000461903	CANX	P27824	592 aa	Known RBP	28.8	■■■□□ 2.2
HLA-A-205	ENST00000461903	ZNF827	Q17R98	1081 aa		28.8	■■■□□ 2.2
HLA-A-205	ENST00000461903	INTS5	Q6P9B9	1019 aa	Known RBP	28.79	■■■□□ 2.2
HLA-A-205	ENST00000461903	AKT1S1	Q96B36	256 aa		28.79	■■■□□ 2.2
HLA-A-205	ENST00000461903	UBR3	Q6ZT12	1888 aa		28.78	■■■□□ 2.2
HLA-A-205	ENST00000461903	NPM2	Q86SE8	214 aa	Known RBP	28.78	■■■□□ 2.2
HLA-A-205	ENST00000461903	STK31	Q9BXU1	1019 aa		28.78	■■■□□ 2.2
HLA-A-205	ENST00000461903	TFCP2L1	Q9NZI6	479 aa		28.78	■■■□□ 2.2
HLA-A-205	ENST00000461903	RTCB	Q9Y3I0	505 aa	Known RBP	28.78	■■■□□ 2.2
HLA-A-205	ENST00000461903	TUBGCP6	Q96RT7	1819 aa		28.78	■■■□□ 2.2
HLA-A-205	ENST00000461903	PIP4K2A	P48426	406 aa	Predicted RBP	28.77	■■■□□ 2.2
HLA-A-205	ENST00000461903	SLC15A2	Q16348	729 aa		28.77	■■■□□ 2.2
HLA-A-205	ENST00000461903	CHPF2	Q9P2E5	772 aa		28.77	■■■□□ 2.2
HLA-A-205	ENST00000461903	ZNF330	Q9Y3S2	320 aa	Predicted RBP	28.77	■■■□□ 2.2
HLA-A-205	ENST00000461903	RPS6KA4	O75676	772 aa		28.76	■■■□□ 2.2
HLA-A-205	ENST00000461903	ZNF428	Q96B54	188 aa		28.76	■■■□□ 2.2
HLA-A-205	ENST00000461903	DBF4	Q9UBU7	674 aa	Predicted RBP	28.76	■■■□□ 2.2
HLA-A-205	ENST00000461903	MYL6B	P14649	208 aa		28.75	■■■□□ 2.19
HLA-A-205	ENST00000461903	IL6ST	P40189	918 aa	Predicted RBP	28.75	■■■□□ 2.19
HLA-A-205	ENST00000461903	QSER1	Q2KHR3	1735 aa		28.75	■■■□□ 2.19
HLA-A-205	ENST00000461903	PHF14	O94880	888 aa		28.75	■■■□□ 2.19
HLA-A-205	ENST00000461903	DDX21	Q9NR30	783 aa	Known RBP eCLIP	28.75	■■■□□ 2.19
HLA-A-205	ENST00000461903	NBPF26	B4DH59	902 aa		28.74	■■■□□ 2.19
HLA-A-205	ENST00000461903	TCERG1	O14776	1098 aa	Known RBP	28.74	■■■□□ 2.19
HLA-A-205	ENST00000461903	SSFA2	P28290	1259 aa		28.74	■■■□□ 2.19
HLA-A-205	ENST00000461903	NBPF10	Q6P3W6	841 aa	Known RBP	28.74	■■■□□ 2.19
HLA-A-205	ENST00000461903	NBPF15	Q8N660	670 aa		28.74	■■■□□ 2.19
HLA-A-205	ENST00000461903	ATF5	Q9Y2D1	282 aa	Predicted RBP	28.74	■■■□□ 2.19
HLA-A-205	ENST00000461903	COL15A1	P39059	1388 aa		28.74	■■■□□ 2.19
HLA-A-205	ENST00000461903	MTFR1L	Q9H019	292 aa		28.73	■■■□□ 2.19
HLA-A-205	ENST00000461903	ANXA1	P04083	346 aa		28.72	■■■□□ 2.19
HLA-A-205	ENST00000461903	ADRA2B	P18089	450 aa		28.72	■■■□□ 2.19
HLA-A-205	ENST00000461903	PROSER3	Q2NL68	480 aa		28.72	■■■□□ 2.19
HLA-A-205	ENST00000461903	CACNA1F	O60840	1977 aa		28.71	■■■□□ 2.19
HLA-A-205	ENST00000461903	UTRN	P46939	3433 aa		28.71	■■■□□ 2.19
HLA-A-205	ENST00000461903	PDIA6	Q15084	440 aa		28.71	■■■□□ 2.19
HLA-A-205	ENST00000461903	FLAD1	Q8NFF5	587 aa		28.71	■■■□□ 2.19
HLA-A-205	ENST00000461903	HYPK	Q9NX55	129 aa		28.71	■■■□□ 2.19
HLA-A-205	ENST00000461903		A0A087WZG4	1122 aa		28.7	■■■□□ 2.18
HLA-A-205	ENST00000461903	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	28.7	■■■□□ 2.18
HLA-A-205	ENST00000461903	EIF5	P55010	431 aa	Known RBP	28.7	■■■□□ 2.18
HLA-A-205	ENST00000461903	TRAPPC3L	Q5T215	181 aa		28.7	■■■□□ 2.18
HLA-A-205	ENST00000461903	SGIP1	Q9BQI5	828 aa		28.7	■■■□□ 2.18
HLA-A-205	ENST00000461903	C4A	P0C0L4	1744 aa		28.69	■■■□□ 2.18
HLA-A-205	ENST00000461903	ALDH1L2	Q3SY69	923 aa		28.69	■■■□□ 2.18
HLA-A-205	ENST00000461903	SYT17	Q9BSW7	474 aa		28.69	■■■□□ 2.18
HLA-A-205	ENST00000461903	FHDC1	Q9C0D6	1143 aa	Predicted RBP	28.69	■■■□□ 2.18
HLA-A-205	ENST00000461903	MSH5	O43196	834 aa		28.68	■■■□□ 2.18
HLA-A-205	ENST00000461903	SLC4A2	P04920	1241 aa		28.68	■■■□□ 2.18
HLA-A-205	ENST00000461903	ARX	Q96QS3	562 aa		28.68	■■■□□ 2.18
HLA-A-205	ENST00000461903	SMC4	Q9NTJ3	1288 aa		28.68	■■■□□ 2.18
HLA-A-205	ENST00000461903	PNPLA7	Q6ZV29	1317 aa		28.68	■■■□□ 2.18
HLA-A-205	ENST00000461903	SMIM5	Q71RC9	77 aa		28.67	■■■□□ 2.18
HLA-A-205	ENST00000461903	AMIGO3	Q86WK7	504 aa		28.67	■■■□□ 2.18
HLA-A-205	ENST00000461903	RFC4	P35249	363 aa		28.66	■■■□□ 2.18
HLA-A-205	ENST00000461903	SSH1	Q8WYL5	1049 aa		28.66	■■■□□ 2.18
HLA-A-205	ENST00000461903	BCL2L13	Q9BXK5	485 aa		28.66	■■■□□ 2.18
HLA-A-205	ENST00000461903	KIF6	Q6ZMV9	814 aa		28.65	■■■□□ 2.18
HLA-A-205	ENST00000461903	RARS	P54136	660 aa	Known RBP	28.64	■■■□□ 2.18
HLA-A-205	ENST00000461903	AIMP1	Q12904	312 aa	Known RBP	28.64	■■■□□ 2.18
HLA-A-205	ENST00000461903	LRP10	Q7Z4F1	713 aa		28.64	■■■□□ 2.18
HLA-A-205	ENST00000461903	DZIP3	Q86Y13	1208 aa	Known RBP	28.64	■■■□□ 2.18
HLA-A-205	ENST00000461903	ZNF784	Q8NCA9	323 aa	Predicted RBP	28.64	■■■□□ 2.18

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