RNA–Protein interactions for RNA: ENST00000461708.1

SSB-206, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-206ENST00000461708 USPL1Q5W0Q7 1092 aa24■■□□□ 1.43
SSB-206ENST00000461708 TTC5Q8N0Z6 440 aa24■■□□□ 1.43
SSB-206ENST00000461708 IL17REQ8NFR9 667 aa24■■□□□ 1.43
SSB-206ENST00000461708 PIM2Q9P1W9 311 aa24■■□□□ 1.43
SSB-206ENST00000461708 SIPA1L3O60292 1781 aaPredicted RBP24■■□□□ 1.43
SSB-206ENST00000461708 FCHSD2O94868 740 aa23.99■■□□□ 1.43
SSB-206ENST00000461708 STARD3NLO95772 234 aa23.99■■□□□ 1.43
SSB-206ENST00000461708 TEX13AQ9BXU3 409 aaPredicted RBP23.99■■□□□ 1.43
SSB-206ENST00000461708 ZBTB1Q9Y2K1 713 aa23.99■■□□□ 1.43
SSB-206ENST00000461708 ZNF790Q6PG37 636 aa23.98■■□□□ 1.43
SSB-206ENST00000461708 CEMIPQ8WUJ3 1361 aa23.98■■□□□ 1.43
SSB-206ENST00000461708 ARHGAP27Q6ZUM4 889 aa23.97■■□□□ 1.43
SSB-206ENST00000461708 NUDCQ9Y266 331 aa23.97■■□□□ 1.43
SSB-206ENST00000461708 NRXN2Q9P2S2 1712 aa23.96■■□□□ 1.43
SSB-206ENST00000461708 HEG1Q9ULI3 1381 aa23.96■■□□□ 1.43
SSB-206ENST00000461708 CNGB1Q14028 1251 aaPredicted RBP23.96■■□□□ 1.43
SSB-206ENST00000461708 DALRD3Q5D0E6 543 aaKnown RBP23.96■■□□□ 1.43
SSB-206ENST00000461708 ZNF526Q8TF50 670 aaPredicted RBP23.96■■□□□ 1.43
SSB-206ENST00000461708 ZNF496Q96IT1 587 aaPredicted RBP23.96■■□□□ 1.43
SSB-206ENST00000461708 RSPH6AQ9H0K4 717 aa23.96■■□□□ 1.43
SSB-206ENST00000461708 A0A087WZG4 1122 aa23.95■■□□□ 1.42
SSB-206ENST00000461708 EIF5P55010 431 aaKnown RBP23.95■■□□□ 1.42
SSB-206ENST00000461708 NFIXQ14938 502 aa23.95■■□□□ 1.42
SSB-206ENST00000461708 AFDNP55196 1824 aaKnown RBP23.94■■□□□ 1.42
SSB-206ENST00000461708 PRKAR2BP31323 418 aa23.94■■□□□ 1.42
SSB-206ENST00000461708 PHACTR3Q96KR7 559 aa23.94■■□□□ 1.42
SSB-206ENST00000461708 BCL2L12Q9HB09 334 aa23.94■■□□□ 1.42
SSB-206ENST00000461708 PPP2R1AP30153 589 aa23.93■■□□□ 1.42
SSB-206ENST00000461708 KIF3CO14782 793 aa23.92■■□□□ 1.42
SSB-206ENST00000461708 CANXP27824 592 aaKnown RBP23.92■■□□□ 1.42
SSB-206ENST00000461708 FMNL2Q96PY5 1086 aa23.92■■□□□ 1.42
SSB-206ENST00000461708 CHRNA5P30532 468 aa23.9■■□□□ 1.42
SSB-206ENST00000461708 IL6STP40189 918 aaPredicted RBP23.9■■□□□ 1.42
SSB-206ENST00000461708 SERPINB2P05120 415 aa23.89■■□□□ 1.41
SSB-206ENST00000461708 U2AF1L5P0DN76 240 aaPredicted RBP23.88■■□□□ 1.41
SSB-206ENST00000461708 HSPA6P17066 643 aa23.88■■□□□ 1.41
SSB-206ENST00000461708 U2AF1Q01081 240 aaKnown RBP eCLIP23.88■■□□□ 1.41
SSB-206ENST00000461708 DLEC1Q9Y238 1755 aa23.88■■□□□ 1.41
SSB-206ENST00000461708 BTBD11A6QL63 1104 aa23.87■■□□□ 1.41
SSB-206ENST00000461708 C9orf131Q5VYM1 1079 aa23.87■■□□□ 1.41
SSB-206ENST00000461708 HTATSF1O43719 755 aaKnown RBP23.86■■□□□ 1.41
SSB-206ENST00000461708 SCN7AQ01118 1682 aa23.86■■□□□ 1.41
SSB-206ENST00000461708 SBF1O95248 1867 aa23.85■■□□□ 1.41
SSB-206ENST00000461708 RTF1Q92541 710 aaKnown RBP23.84■■□□□ 1.41
SSB-206ENST00000461708 PDZRN3Q9UPQ7 1066 aa23.84■■□□□ 1.41
SSB-206ENST00000461708 TOMM70O94826 608 aa23.83■■□□□ 1.41
SSB-206ENST00000461708 H0YIN7 160 aa23.82■■□□□ 1.4
SSB-206ENST00000461708 KCNQ3O43525 872 aa23.82■■□□□ 1.4
SSB-206ENST00000461708 NPM2Q86SE8 214 aaKnown RBP23.82■■□□□ 1.4
SSB-206ENST00000461708 ZC3H4Q9UPT8 1303 aaKnown RBP23.82■■□□□ 1.4
SSB-206ENST00000461708 CARMIL3Q8ND23 1372 aa23.81■■□□□ 1.4
SSB-206ENST00000461708 A1BGP04217 495 aa23.81■■□□□ 1.4
SSB-206ENST00000461708 TBC1D9BQ66K14 1250 aa23.81■■□□□ 1.4
SSB-206ENST00000461708 TTLL6Q8N841 843 aa23.81■■□□□ 1.4
SSB-206ENST00000461708 BRIP1Q9BX63 1249 aa23.81■■□□□ 1.4
SSB-206ENST00000461708 TBC1D2BQ9UPU7 963 aa23.81■■□□□ 1.4
SSB-206ENST00000461708 SNRPA1P09661 255 aaKnown RBP23.8■■□□□ 1.4
SSB-206ENST00000461708 C2CD5Q86YS7 1000 aa23.8■■□□□ 1.4
SSB-206ENST00000461708 RNF181Q9P0P0 153 aa23.8■■□□□ 1.4
SSB-206ENST00000461708 KDM2BQ8NHM5 1336 aa23.8■■□□□ 1.4
SSB-206ENST00000461708 CAMTA2O94983 1202 aa23.79■■□□□ 1.4
SSB-206ENST00000461708 BICDL1Q6ZP65 573 aa23.79■■□□□ 1.4
SSB-206ENST00000461708 MCM10Q7L590 875 aa23.79■■□□□ 1.4
SSB-206ENST00000461708 NMRK2Q9NPI5 230 aa23.79■■□□□ 1.4
SSB-206ENST00000461708 PDE6BP35913 854 aa23.78■■□□□ 1.4
SSB-206ENST00000461708 ZNF330Q9Y3S2 320 aaPredicted RBP23.78■■□□□ 1.4
SSB-206ENST00000461708 USP16Q9Y5T5 823 aa23.78■■□□□ 1.4
SSB-206ENST00000461708 ANKRD31Q8N7Z5 1873 aa23.78■■□□□ 1.4
SSB-206ENST00000461708 RGL2O15211 777 aa23.77■■□□□ 1.4
SSB-206ENST00000461708 SETDB2Q96T68 719 aa23.77■■□□□ 1.4
SSB-206ENST00000461708 BCORQ6W2J9 1755 aa23.77■■□□□ 1.4
SSB-206ENST00000461708 TAF7Q15545 349 aaPredicted RBP23.76■■□□□ 1.39
SSB-206ENST00000461708 PRR5LQ6MZQ0 368 aa23.76■■□□□ 1.39
SSB-206ENST00000461708 CLEC4GQ6UXB4 293 aa23.76■■□□□ 1.39
SSB-206ENST00000461708 LMNB1P20700 586 aa23.75■■□□□ 1.39
SSB-206ENST00000461708 DZIP3Q86Y13 1208 aaKnown RBP23.75■■□□□ 1.39
SSB-206ENST00000461708 RBM46Q8TBY0 533 aaKnown RBP23.75■■□□□ 1.39
SSB-206ENST00000461708 NEFMP07197 916 aa23.74■■□□□ 1.39
SSB-206ENST00000461708 APLP1P51693 650 aa23.74■■□□□ 1.39
SSB-206ENST00000461708 TNRC6CQ9HCJ0 1690 aaKnown RBP23.73■■□□□ 1.39
SSB-206ENST00000461708 DCTN1Q14203 1278 aa23.73■■□□□ 1.39
SSB-206ENST00000461708 CNBD1Q8NA66 436 aa23.73■■□□□ 1.39
SSB-206ENST00000461708 RASSF7Q02833 373 aa23.72■■□□□ 1.39
SSB-206ENST00000461708 ZNF652Q9Y2D9 606 aa23.72■■□□□ 1.39
SSB-206ENST00000461708 DLG5Q8TDM6 1919 aa23.71■■□□□ 1.39
SSB-206ENST00000461708 PRAMEF22A3QJZ6 481 aa23.71■■□□□ 1.39
SSB-206ENST00000461708 C16orf71Q8IYS4 520 aaPredicted RBP23.71■■□□□ 1.39
SSB-206ENST00000461708 PNISRQ8TF01 805 aaKnown RBP23.71■■□□□ 1.39
SSB-206ENST00000461708 PNNQ9H307 717 aaKnown RBP23.71■■□□□ 1.39
SSB-206ENST00000461708 ST5P78524 1137 aa23.7■■□□□ 1.38
SSB-206ENST00000461708 FSTL1Q12841 308 aa23.7■■□□□ 1.38
SSB-206ENST00000461708 PLEKHF1Q96S99 279 aa23.7■■□□□ 1.38
SSB-206ENST00000461708 COL11A2P13942 1736 aaPredicted RBP23.7■■□□□ 1.38
SSB-206ENST00000461708 NBPF26B4DH59 902 aa23.69■■□□□ 1.38
SSB-206ENST00000461708 NFKBIEO00221 500 aa23.69■■□□□ 1.38
SSB-206ENST00000461708 STYK1Q6J9G0 422 aa23.69■■□□□ 1.38
SSB-206ENST00000461708 NBPF10Q6P3W6 841 aaKnown RBP23.69■■□□□ 1.38
SSB-206ENST00000461708 NBPF15Q8N660 670 aa23.69■■□□□ 1.38
SSB-206ENST00000461708 CNKSR1Q969H4 720 aa23.69■■□□□ 1.38
SSB-206ENST00000461708 ZNF622Q969S3 477 aaKnown RBP eCLIP23.69■■□□□ 1.381e-12■□□□□ 8.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms