RNA–Protein interactions for RNA: ENST00000461636.1

THUMPD3-207, Transcript of THUMP domain containing 3, humanhuman

TSL 2

Gene THUMPD3, Length 670 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-207ENST00000461636 ATXN7L1Q9ULK2 861 aaPredicted RBP9.52□□□□□ -0.89
THUMPD3-207ENST00000461636 DNMBPQ6XZF7 1577 aa9.51□□□□□ -0.89
THUMPD3-207ENST00000461636 STAU1O95793 577 aaKnown RBP9.51□□□□□ -0.89
THUMPD3-207ENST00000461636 INHAP05111 366 aa9.51□□□□□ -0.89
THUMPD3-207ENST00000461636 PLA2G4AP47712 749 aa9.51□□□□□ -0.89
THUMPD3-207ENST00000461636 GDF2Q9UK05 429 aaPredicted RBP9.51□□□□□ -0.89
THUMPD3-207ENST00000461636 CNTNAP5Q8WYK1 1306 aa9.51□□□□□ -0.89
THUMPD3-207ENST00000461636 TOPBP1Q92547 1522 aa9.51□□□□□ -0.89
THUMPD3-207ENST00000461636 SCNN1DP51172 638 aa9.5□□□□□ -0.89
THUMPD3-207ENST00000461636 SUZ12Q15022 739 aaKnown RBP9.5□□□□□ -0.89
THUMPD3-207ENST00000461636 FIGNL1Q6PIW4 674 aa9.5□□□□□ -0.89
THUMPD3-207ENST00000461636 C1orf216Q8TAB5 229 aa9.5□□□□□ -0.89
THUMPD3-207ENST00000461636 CRISPLD1Q9H336 500 aa9.5□□□□□ -0.89
THUMPD3-207ENST00000461636 UBAP2LQ14157 1087 aaKnown RBP9.49□□□□□ -0.89
THUMPD3-207ENST00000461636 WWC1Q8IX03 1113 aa9.49□□□□□ -0.89
THUMPD3-207ENST00000461636 GOLGA6L1Q8N7Z2 621 aa9.49□□□□□ -0.89
THUMPD3-207ENST00000461636 NIFKQ9BYG3 293 aaKnown RBP9.49□□□□□ -0.89
THUMPD3-207ENST00000461636 ABCC8Q09428 1581 aa9.49□□□□□ -0.89
THUMPD3-207ENST00000461636 CUX1P39880 1505 aa9.48□□□□□ -0.89
THUMPD3-207ENST00000461636 BMP4P12644 408 aa9.48□□□□□ -0.89
THUMPD3-207ENST00000461636 KLRG1Q96E93 195 aa9.48□□□□□ -0.89
THUMPD3-207ENST00000461636 FGFR3P22607 806 aa9.47□□□□□ -0.89
THUMPD3-207ENST00000461636 SMTNP53814 917 aa9.47□□□□□ -0.89
THUMPD3-207ENST00000461636 NBPF1Q3BBV0 1214 aa9.47□□□□□ -0.89
THUMPD3-207ENST00000461636 ABHD17AQ96GS6 310 aa9.47□□□□□ -0.89
THUMPD3-207ENST00000461636 GALNT6Q8NCL4 622 aa9.46□□□□□ -0.9
THUMPD3-207ENST00000461636 DCAF5Q96JK2 942 aa9.46□□□□□ -0.9
THUMPD3-207ENST00000461636 EML3Q32P44 896 aa9.45□□□□□ -0.9
THUMPD3-207ENST00000461636 NLRP8Q86W28 1048 aa9.45□□□□□ -0.9
THUMPD3-207ENST00000461636 AIDAQ96BJ3 306 aa9.45□□□□□ -0.9
THUMPD3-207ENST00000461636 MKL2Q9ULH7 1088 aa9.45□□□□□ -0.9
THUMPD3-207ENST00000461636 BNIP3LO60238 219 aa9.44□□□□□ -0.9
THUMPD3-207ENST00000461636 ATP4AP20648 1035 aa9.44□□□□□ -0.9
THUMPD3-207ENST00000461636 PLA2G4EQ3MJ16 856 aa9.44□□□□□ -0.9
THUMPD3-207ENST00000461636 SLCO4C1Q6ZQN7 724 aa9.44□□□□□ -0.9
THUMPD3-207ENST00000461636 EDARADDQ8WWZ3 215 aa9.44□□□□□ -0.9
THUMPD3-207ENST00000461636 NDFIP2Q9NV92 336 aa9.44□□□□□ -0.9
THUMPD3-207ENST00000461636 SERTAD1Q9UHV2 236 aa9.44□□□□□ -0.9
THUMPD3-207ENST00000461636 COG6Q9Y2V7 657 aa9.44□□□□□ -0.9
THUMPD3-207ENST00000461636 TARBP1Q13395 1621 aaKnown RBP9.44□□□□□ -0.9
THUMPD3-207ENST00000461636 BIVM-ERCC5R4GMW8 1640 aa9.44□□□□□ -0.9
THUMPD3-207ENST00000461636 POLA1P09884 1462 aaPredicted RBP9.43□□□□□ -0.9
THUMPD3-207ENST00000461636 SHISA8B8ZZ34 492 aa9.43□□□□□ -0.9
THUMPD3-207ENST00000461636 LZTS3O60299 673 aaPredicted RBP9.43□□□□□ -0.9
THUMPD3-207ENST00000461636 TATP17735 454 aaPredicted RBP9.43□□□□□ -0.9
THUMPD3-207ENST00000461636 AMPD1P23109 780 aa9.43□□□□□ -0.9
THUMPD3-207ENST00000461636 SLC4A9Q96Q91 983 aa9.43□□□□□ -0.9
THUMPD3-207ENST00000461636 RRAGCQ9HB90 399 aa9.43□□□□□ -0.9
THUMPD3-207ENST00000461636 NOD1Q9Y239 953 aa9.43□□□□□ -0.9
THUMPD3-207ENST00000461636 PCDHGC4Q9Y5F7 938 aa9.43□□□□□ -0.9
THUMPD3-207ENST00000461636 TOP2BQ02880 1626 aa9.42□□□□□ -0.9
THUMPD3-207ENST00000461636 LOC100996750A0A140TA64 210 aa9.42□□□□□ -0.9
THUMPD3-207ENST00000461636 A6NJY4 79 aa9.42□□□□□ -0.9
THUMPD3-207ENST00000461636 MSTNO14793 375 aa9.42□□□□□ -0.9
THUMPD3-207ENST00000461636 BACH1O14867 736 aa9.42□□□□□ -0.9
THUMPD3-207ENST00000461636 SKIP12755 728 aa9.42□□□□□ -0.9
THUMPD3-207ENST00000461636 MTFR1Q15390 333 aa9.42□□□□□ -0.9
THUMPD3-207ENST00000461636 ARSJQ5FYB0 599 aaPredicted RBP9.42□□□□□ -0.9
THUMPD3-207ENST00000461636 ALYREFQ86V81 257 aaKnown RBP9.42□□□□□ -0.9
THUMPD3-207ENST00000461636 NFATC2IPQ8NCF5 419 aa9.42□□□□□ -0.9
THUMPD3-207ENST00000461636 KRTAP4-6Q9BYQ5 205 aa9.42□□□□□ -0.9
THUMPD3-207ENST00000461636 ZCCHC2Q9C0B9 1178 aaKnown RBP9.42□□□□□ -0.9
THUMPD3-207ENST00000461636 SYNJ1O43426 1573 aa9.41□□□□□ -0.9
THUMPD3-207ENST00000461636 IFT140Q96RY7 1462 aa9.41□□□□□ -0.9
THUMPD3-207ENST00000461636 TMEM229AB2RXF0 380 aa9.41□□□□□ -0.9
THUMPD3-207ENST00000461636 PIK3CDO00329 1044 aa9.41□□□□□ -0.9
THUMPD3-207ENST00000461636 PIK3R2O00459 728 aa9.41□□□□□ -0.9
THUMPD3-207ENST00000461636 CDK2AP1O14519 115 aa9.41□□□□□ -0.9
THUMPD3-207ENST00000461636 ATXN7O15265 892 aaPredicted RBP9.41□□□□□ -0.9
THUMPD3-207ENST00000461636 SNRPNP63162 240 aaKnown RBP9.41□□□□□ -0.9
THUMPD3-207ENST00000461636 DNAAF2Q9NVR5 837 aaKnown RBP9.41□□□□□ -0.9
THUMPD3-207ENST00000461636 ZDHHC3Q9NYG2 299 aa9.41□□□□□ -0.9
THUMPD3-207ENST00000461636 GGA1Q9UJY5 639 aa9.41□□□□□ -0.9
THUMPD3-207ENST00000461636 WDR97A6NE52 1622 aa9.41□□□□□ -0.9
THUMPD3-207ENST00000461636 RAD21O60216 631 aa9.4□□□□□ -0.9
THUMPD3-207ENST00000461636 ARAFP10398 606 aa9.4□□□□□ -0.9
THUMPD3-207ENST00000461636 CTBSQ01459 385 aa9.4□□□□□ -0.9
THUMPD3-207ENST00000461636 PSME1Q06323 249 aa9.4□□□□□ -0.9
THUMPD3-207ENST00000461636 C1orf229Q6ZS94 237 aaPredicted RBP9.4□□□□□ -0.9
THUMPD3-207ENST00000461636 CABP1Q9NZU7 370 aa9.4□□□□□ -0.9
THUMPD3-207ENST00000461636 IQSEC3Q9UPP2 1182 aaPredicted RBP9.4□□□□□ -0.9
THUMPD3-207ENST00000461636 FGD5Q6ZNL6 1462 aa9.4□□□□□ -0.91
THUMPD3-207ENST00000461636 WRNQ14191 1432 aaPredicted RBP eCLIP9.39□□□□□ -0.91
THUMPD3-207ENST00000461636 A0A1W2PNR3 127 aa9.39□□□□□ -0.91
THUMPD3-207ENST00000461636 C2CD2LO14523 706 aa9.39□□□□□ -0.91
THUMPD3-207ENST00000461636 GTF2IP78347 998 aa9.39□□□□□ -0.91
THUMPD3-207ENST00000461636 PCDHGA11Q9Y5H2 935 aa9.39□□□□□ -0.91
THUMPD3-207ENST00000461636 GJA3Q9Y6H8 435 aa9.39□□□□□ -0.91
THUMPD3-207ENST00000461636 DCDC2BA2VCK2 349 aa9.38□□□□□ -0.91
THUMPD3-207ENST00000461636 SPOCK3Q9BQ16 436 aa9.38□□□□□ -0.91
THUMPD3-207ENST00000461636 ALG2Q9H553 416 aa9.38□□□□□ -0.91
THUMPD3-207ENST00000461636 ZNF608Q9ULD9 1512 aaPredicted RBP9.37□□□□□ -0.91
THUMPD3-207ENST00000461636 EPXP11678 715 aa9.37□□□□□ -0.91
THUMPD3-207ENST00000461636 NCOA4Q13772 614 aa9.37□□□□□ -0.91
THUMPD3-207ENST00000461636 FAM182BQ5T319 152 aa9.37□□□□□ -0.91
THUMPD3-207ENST00000461636 ZNF295-AS1Q8N0V1 137 aa9.37□□□□□ -0.91
THUMPD3-207ENST00000461636 RAD54L2Q9Y4B4 1467 aa9.36□□□□□ -0.91
THUMPD3-207ENST00000461636 KHNYNO15037 678 aaKnown RBP9.36□□□□□ -0.91
THUMPD3-207ENST00000461636 MAPTP10636 758 aaKnown RBP9.36□□□□□ -0.91
THUMPD3-207ENST00000461636 ADH6P28332 368 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms