RNA–Protein interactions for RNA: ENST00000461433.1

SSBP1-202, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 1,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-202ENST00000461433 TEX13AQ9BXU3 409 aaPredicted RBP14.65□□□□□ -0.06
SSBP1-202ENST00000461433 UBR3Q6ZT12 1888 aa14.65□□□□□ -0.06
SSBP1-202ENST00000461433 INTS5Q6P9B9 1019 aaKnown RBP14.65□□□□□ -0.06
SSBP1-202ENST00000461433 CNTNAP4Q9C0A0 1308 aa14.64□□□□□ -0.07
SSBP1-202ENST00000461433 E9PSI1 815 aa14.64□□□□□ -0.07
SSBP1-202ENST00000461433 CRKLP46109 303 aaKnown RBP14.64□□□□□ -0.07
SSBP1-202ENST00000461433 SLC15A2Q16348 729 aa14.64□□□□□ -0.07
SSBP1-202ENST00000461433 RC3H1Q5TC82 1133 aaKnown RBP14.64□□□□□ -0.07
SSBP1-202ENST00000461433 AMIGO3Q86WK7 504 aa14.64□□□□□ -0.07
SSBP1-202ENST00000461433 TSPYL6Q8N831 410 aa14.64□□□□□ -0.07
SSBP1-202ENST00000461433 MYH16Q9H6N6 1097 aa14.64□□□□□ -0.07
SSBP1-202ENST00000461433 QSER1Q2KHR3 1735 aa14.63□□□□□ -0.07
SSBP1-202ENST00000461433 DUSP27Q5VZP5 1158 aa14.63□□□□□ -0.07
SSBP1-202ENST00000461433 STARD3NLO95772 234 aa14.62□□□□□ -0.07
SSBP1-202ENST00000461433 ELL2O00472 640 aaPredicted RBP14.61□□□□□ -0.07
SSBP1-202ENST00000461433 A1BGP04217 495 aa14.61□□□□□ -0.07
SSBP1-202ENST00000461433 HOXB7P09629 217 aa14.61□□□□□ -0.07
SSBP1-202ENST00000461433 HMGB2P26583 209 aaKnown RBP14.61□□□□□ -0.07
SSBP1-202ENST00000461433 EXOSC9Q06265 439 aaKnown RBP14.61□□□□□ -0.07
SSBP1-202ENST00000461433 NBPF14Q5TI25 921 aa14.61□□□□□ -0.07
SSBP1-202ENST00000461433 SMIM5Q71RC9 77 aa14.61□□□□□ -0.07
SSBP1-202ENST00000461433 CCDC87Q9NVE4 849 aa14.61□□□□□ -0.07
SSBP1-202ENST00000461433 NBPF26B4DH59 902 aa14.61□□□□□ -0.07
SSBP1-202ENST00000461433 NBPF10Q6P3W6 841 aaKnown RBP14.61□□□□□ -0.07
SSBP1-202ENST00000461433 NBPF15Q8N660 670 aa14.61□□□□□ -0.07
SSBP1-202ENST00000461433 STK32BQ9NY57 414 aa14.61□□□□□ -0.07
SSBP1-202ENST00000461433 ZBTB1Q9Y2K1 713 aa14.61□□□□□ -0.07
SSBP1-202ENST00000461433 GNPATO15228 680 aa14.6□□□□□ -0.07
SSBP1-202ENST00000461433 RPS6KA4O75676 772 aa14.6□□□□□ -0.07
SSBP1-202ENST00000461433 AK7Q96M32 723 aa14.6□□□□□ -0.07
SSBP1-202ENST00000461433 VAMP4O75379 141 aa14.59□□□□□ -0.07
SSBP1-202ENST00000461433 EIF2S2P20042 333 aaKnown RBP14.59□□□□□ -0.07
SSBP1-202ENST00000461433 PIP4K2AP48426 406 aaPredicted RBP14.59□□□□□ -0.07
SSBP1-202ENST00000461433 PDIA6Q15084 440 aa14.59□□□□□ -0.07
SSBP1-202ENST00000461433 TWISTNBQ3B726 338 aaPredicted RBP14.59□□□□□ -0.07
SSBP1-202ENST00000461433 TFCP2L1Q9NZI6 479 aa14.59□□□□□ -0.07
SSBP1-202ENST00000461433 PNPLA7Q6ZV29 1317 aa14.59□□□□□ -0.07
SSBP1-202ENST00000461433 CANXP27824 592 aaKnown RBP14.58□□□□□ -0.07
SSBP1-202ENST00000461433 R3HDM1Q15032 1099 aaKnown RBP14.58□□□□□ -0.07
SSBP1-202ENST00000461433 YTHDC1Q96MU7 727 aaKnown RBP14.58□□□□□ -0.07
SSBP1-202ENST00000461433 PDGFDQ9GZP0 370 aaPredicted RBP14.58□□□□□ -0.07
SSBP1-202ENST00000461433 SOS1Q07889 1333 aaPredicted RBP14.58□□□□□ -0.07
SSBP1-202ENST00000461433 C4AP0C0L4 1744 aa14.58□□□□□ -0.08
SSBP1-202ENST00000461433 CASZ1Q86V15 1759 aa14.58□□□□□ -0.08
SSBP1-202ENST00000461433 EIF5P55010 431 aaKnown RBP14.58□□□□□ -0.08
SSBP1-202ENST00000461433 LRP10Q7Z4F1 713 aa14.58□□□□□ -0.08
SSBP1-202ENST00000461433 NECTIN2Q92692 538 aa14.58□□□□□ -0.08
SSBP1-202ENST00000461433 RTCBQ9Y3I0 505 aaKnown RBP14.58□□□□□ -0.08
SSBP1-202ENST00000461433 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.57□□□□□ -0.08
SSBP1-202ENST00000461433 SSFA2P28290 1259 aa14.57□□□□□ -0.08
SSBP1-202ENST00000461433 IL6STP40189 918 aaPredicted RBP14.57□□□□□ -0.08
SSBP1-202ENST00000461433 HDGFL1Q5TGJ6 251 aa14.57□□□□□ -0.08
SSBP1-202ENST00000461433 COL23A1Q86Y22 540 aaPredicted RBP14.57□□□□□ -0.08
SSBP1-202ENST00000461433 PSDA5PKW4 1024 aaPredicted RBP14.56□□□□□ -0.08
SSBP1-202ENST00000461433 PROSER3Q2NL68 480 aa14.56□□□□□ -0.08
SSBP1-202ENST00000461433 ARHGEF1Q92888 912 aaKnown RBP14.56□□□□□ -0.08
SSBP1-202ENST00000461433 ERBB4Q15303 1308 aa14.56□□□□□ -0.08
SSBP1-202ENST00000461433 PHF14O94880 888 aa14.55□□□□□ -0.08
SSBP1-202ENST00000461433 CHPF2Q9P2E5 772 aa14.55□□□□□ -0.08
SSBP1-202ENST00000461433 COL15A1P39059 1388 aa14.55□□□□□ -0.08
SSBP1-202ENST00000461433 ANXA1P04083 346 aa14.55□□□□□ -0.08
SSBP1-202ENST00000461433 ADRA2BP18089 450 aa14.55□□□□□ -0.08
SSBP1-202ENST00000461433 TRAPPC3LQ5T215 181 aa14.55□□□□□ -0.08
SSBP1-202ENST00000461433 DDX21Q9NR30 783 aaKnown RBP eCLIP14.55□□□□□ -0.08
SSBP1-202ENST00000461433 MYL6BP14649 208 aa14.54□□□□□ -0.08
SSBP1-202ENST00000461433 FLAD1Q8NFF5 587 aa14.54□□□□□ -0.08
SSBP1-202ENST00000461433 TCERG1O14776 1098 aaKnown RBP14.53□□□□□ -0.08
SSBP1-202ENST00000461433 CCDC30Q5VVM6 783 aa14.53□□□□□ -0.08
SSBP1-202ENST00000461433 DBF4Q9UBU7 674 aaPredicted RBP14.53□□□□□ -0.08
SSBP1-202ENST00000461433 CACNA1FO60840 1977 aa14.53□□□□□ -0.08
SSBP1-202ENST00000461433 SRP68Q9UHB9 627 aaKnown RBP14.52□□□□□ -0.09
SSBP1-202ENST00000461433 TBC1D2BQ9UPU7 963 aa14.52□□□□□ -0.09
SSBP1-202ENST00000461433 ZNF330Q9Y3S2 320 aaPredicted RBP14.52□□□□□ -0.09
SSBP1-202ENST00000461433 BCORQ6W2J9 1755 aa14.51□□□□□ -0.09
SSBP1-202ENST00000461433 USP42Q9H9J4 1324 aaKnown RBP14.51□□□□□ -0.09
SSBP1-202ENST00000461433 COL24A1Q17RW2 1714 aa14.51□□□□□ -0.09
SSBP1-202ENST00000461433 CT47B1P0C2W7 299 aaPredicted RBP14.51□□□□□ -0.09
SSBP1-202ENST00000461433 RFC4P35249 363 aa14.51□□□□□ -0.09
SSBP1-202ENST00000461433 TTLL7Q6ZT98 887 aa14.51□□□□□ -0.09
SSBP1-202ENST00000461433 CHMP4AQ9BY43 222 aa14.51□□□□□ -0.09
SSBP1-202ENST00000461433 NARFQ9UHQ1 456 aa14.51□□□□□ -0.09
SSBP1-202ENST00000461433 SCN7AQ01118 1682 aa14.5□□□□□ -0.09
SSBP1-202ENST00000461433 A0A087WZG4 1122 aa14.5□□□□□ -0.09
SSBP1-202ENST00000461433 COPS6Q7L5N1 327 aa14.5□□□□□ -0.09
SSBP1-202ENST00000461433 DZIP3Q86Y13 1208 aaKnown RBP14.5□□□□□ -0.09
SSBP1-202ENST00000461433 PHAXQ9H814 394 aaKnown RBP14.5□□□□□ -0.09
SSBP1-202ENST00000461433 BCL2L12Q9HB09 334 aa14.5□□□□□ -0.09
SSBP1-202ENST00000461433 HYPKQ9NX55 129 aa14.5□□□□□ -0.09
SSBP1-202ENST00000461433 CAMTA2O94983 1202 aa14.49□□□□□ -0.09
SSBP1-202ENST00000461433 SLC4A2P04920 1241 aa14.49□□□□□ -0.09
SSBP1-202ENST00000461433 GYS1P13807 737 aa14.49□□□□□ -0.09
SSBP1-202ENST00000461433 USPL1Q5W0Q7 1092 aa14.49□□□□□ -0.09
SSBP1-202ENST00000461433 G2E3Q7L622 706 aa14.49□□□□□ -0.09
SSBP1-202ENST00000461433 SLC16A10Q8TF71 515 aa14.49□□□□□ -0.09
SSBP1-202ENST00000461433 XAGE3Q8WTP9 111 aa14.49□□□□□ -0.09
SSBP1-202ENST00000461433 ZNF428Q96B54 188 aa14.49□□□□□ -0.09
SSBP1-202ENST00000461433 NUP98P52948 1817 aa14.49□□□□□ -0.09
SSBP1-202ENST00000461433 SSH1Q8WYL5 1049 aa14.49□□□□□ -0.09
SSBP1-202ENST00000461433 STK31Q9BXU1 1019 aa14.49□□□□□ -0.09
SSBP1-202ENST00000461433 AIMP1Q12904 312 aaKnown RBP14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms