RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 HTATSF1O43719 755 aaKnown RBP25.15■■□□□ 1.62
COL5A1-203ENST00000460264 GRIN3BO60391 1043 aa25.15■■□□□ 1.62
COL5A1-203ENST00000460264 STARD3NLO95772 234 aa25.15■■□□□ 1.62
COL5A1-203ENST00000460264 FMNL2Q96PY5 1086 aa25.15■■□□□ 1.62
COL5A1-203ENST00000460264 PLEKHF1Q96S99 279 aa25.15■■□□□ 1.62
COL5A1-203ENST00000460264 PARP3Q9Y6F1 533 aa25.15■■□□□ 1.62
COL5A1-203ENST00000460264 KCNQ3O43525 872 aa25.14■■□□□ 1.62
COL5A1-203ENST00000460264 DCTN1Q14203 1278 aa25.14■■□□□ 1.62
COL5A1-203ENST00000460264 BRCA1P38398 1863 aaKnown RBP25.14■■□□□ 1.61
COL5A1-203ENST00000460264 SCN7AQ01118 1682 aa25.13■■□□□ 1.61
COL5A1-203ENST00000460264 ZPR1O75312 459 aa25.13■■□□□ 1.61
COL5A1-203ENST00000460264 NEFMP07197 916 aa25.13■■□□□ 1.61
COL5A1-203ENST00000460264 USPL1Q5W0Q7 1092 aa25.13■■□□□ 1.61
COL5A1-203ENST00000460264 TEX13AQ9BXU3 409 aaPredicted RBP25.13■■□□□ 1.61
COL5A1-203ENST00000460264 AFDNP55196 1824 aaKnown RBP25.12■■□□□ 1.61
COL5A1-203ENST00000460264 CANXP27824 592 aaKnown RBP25.12■■□□□ 1.61
COL5A1-203ENST00000460264 DDR1Q08345 913 aa25.12■■□□□ 1.61
COL5A1-203ENST00000460264 NARFQ9UHQ1 456 aa25.12■■□□□ 1.61
COL5A1-203ENST00000460264 MYBBP1AQ9BQG0 1328 aaKnown RBP25.12■■□□□ 1.61
COL5A1-203ENST00000460264 KDM3BQ7LBC6 1761 aa25.11■■□□□ 1.61
COL5A1-203ENST00000460264 ZNF784Q8NCA9 323 aaPredicted RBP25.11■■□□□ 1.61
COL5A1-203ENST00000460264 WWC3Q9ULE0 1092 aa25.11■■□□□ 1.61
COL5A1-203ENST00000460264 NRXN2Q9P2S2 1712 aa25.1■■□□□ 1.61
COL5A1-203ENST00000460264 EIF5P55010 431 aaKnown RBP25.09■■□□□ 1.61
COL5A1-203ENST00000460264 TGFB2P61812 414 aa25.09■■□□□ 1.61
COL5A1-203ENST00000460264 LAMB4A4D0S4 1761 aa25.08■■□□□ 1.61
COL5A1-203ENST00000460264 POLRMTO00411 1230 aaKnown RBP25.08■■□□□ 1.61
COL5A1-203ENST00000460264 TM4SF1P30408 202 aa25.08■■□□□ 1.61
COL5A1-203ENST00000460264 NFE2L2Q16236 605 aa25.08■■□□□ 1.61
COL5A1-203ENST00000460264 PNNQ9H307 717 aaKnown RBP25.08■■□□□ 1.61
COL5A1-203ENST00000460264 MAPK8IP3Q9UPT6 1336 aa25.08■■□□□ 1.6
COL5A1-203ENST00000460264 BCORQ6W2J9 1755 aa25.08■■□□□ 1.6
COL5A1-203ENST00000460264 BCL2L12Q9HB09 334 aa25.07■■□□□ 1.6
COL5A1-203ENST00000460264 A0A087WZG4 1122 aa25.05■■□□□ 1.6
COL5A1-203ENST00000460264 A0A0G2JLW4 131 aa25.05■■□□□ 1.6
COL5A1-203ENST00000460264 NFIXQ14938 502 aa25.05■■□□□ 1.6
COL5A1-203ENST00000460264 TAF7Q15545 349 aaPredicted RBP25.05■■□□□ 1.6
COL5A1-203ENST00000460264 A1BGP04217 495 aa25.04■■□□□ 1.6
COL5A1-203ENST00000460264 IL6STP40189 918 aaPredicted RBP25.04■■□□□ 1.6
COL5A1-203ENST00000460264 ARFGEF1Q9Y6D6 1849 aa25.04■■□□□ 1.6
COL5A1-203ENST00000460264 PRAMEF22A3QJZ6 481 aa25.03■■□□□ 1.6
COL5A1-203ENST00000460264 SNRPA1P09661 255 aaKnown RBP25.03■■□□□ 1.6
COL5A1-203ENST00000460264 DPEP1P16444 411 aa25.03■■□□□ 1.6
COL5A1-203ENST00000460264 ZNF330Q9Y3S2 320 aaPredicted RBP25.03■■□□□ 1.6
COL5A1-203ENST00000460264 USP16Q9Y5T5 823 aa25.03■■□□□ 1.6
COL5A1-203ENST00000460264 THUMPD2Q9BTF0 503 aaKnown RBP25.02■■□□□ 1.6
COL5A1-203ENST00000460264 DLEC1Q9Y238 1755 aa25.01■■□□□ 1.59
COL5A1-203ENST00000460264 ZEB1P37275 1124 aaPredicted RBP25.01■■□□□ 1.59
COL5A1-203ENST00000460264 MIS18AQ9NYP9 233 aa25.01■■□□□ 1.59
COL5A1-203ENST00000460264 KCNA3P22001 575 aa25■■□□□ 1.59
COL5A1-203ENST00000460264 TBC1D2BQ9UPU7 963 aa25■■□□□ 1.59
COL5A1-203ENST00000460264 PNISRQ8TF01 805 aaKnown RBP24.99■■□□□ 1.59
COL5A1-203ENST00000460264 PRKRIP1Q9H875 184 aaPredicted RBP24.99■■□□□ 1.59
COL5A1-203ENST00000460264 BCS1LQ9Y276 419 aa24.99■■□□□ 1.59
COL5A1-203ENST00000460264 PIP4K2AP48426 406 aaPredicted RBP24.98■■□□□ 1.59
COL5A1-203ENST00000460264 ADCY9O60503 1353 aa24.97■■□□□ 1.59
COL5A1-203ENST00000460264 SERPINB2P05120 415 aa24.97■■□□□ 1.59
COL5A1-203ENST00000460264 NPM2Q86SE8 214 aaKnown RBP24.97■■□□□ 1.59
COL5A1-203ENST00000460264 ANKRD31Q8N7Z5 1873 aa24.97■■□□□ 1.59
COL5A1-203ENST00000460264 CAMTA2O94983 1202 aa24.96■■□□□ 1.59
COL5A1-203ENST00000460264 TBC1D9BQ66K14 1250 aa24.96■■□□□ 1.59
COL5A1-203ENST00000460264 BICDL1Q6ZP65 573 aa24.96■■□□□ 1.59
COL5A1-203ENST00000460264 CHRNA5P30532 468 aa24.95■■□□□ 1.58
COL5A1-203ENST00000460264 TMPOP42166 694 aaKnown RBP24.95■■□□□ 1.58
COL5A1-203ENST00000460264 RIPK4P57078 832 aa24.95■■□□□ 1.58
COL5A1-203ENST00000460264 CARMIL3Q8ND23 1372 aa24.94■■□□□ 1.58
COL5A1-203ENST00000460264 NBPF26B4DH59 902 aa24.94■■□□□ 1.58
COL5A1-203ENST00000460264 WDR43Q15061 677 aaKnown RBP eCLIP24.94■■□□□ 1.58
COL5A1-203ENST00000460264 NBPF10Q6P3W6 841 aaKnown RBP24.94■■□□□ 1.58
COL5A1-203ENST00000460264 DZIP3Q86Y13 1208 aaKnown RBP24.94■■□□□ 1.58
COL5A1-203ENST00000460264 NBPF15Q8N660 670 aa24.94■■□□□ 1.58
COL5A1-203ENST00000460264 PIM2Q9P1W9 311 aa24.94■■□□□ 1.58
COL5A1-203ENST00000460264 ATP10DQ9P241 1426 aa24.94■■□□□ 1.58
COL5A1-203ENST00000460264 CCDC146Q8IYE0 955 aa24.93■■□□□ 1.58
COL5A1-203ENST00000460264 GIGYF1O75420 1035 aaPredicted RBP24.92■■□□□ 1.58
COL5A1-203ENST00000460264 EIF4A1P60842 406 aaKnown RBP24.92■■□□□ 1.58
COL5A1-203ENST00000460264 LMOD3Q0VAK6 560 aa24.91■■□□□ 1.58
COL5A1-203ENST00000460264 COL11A2P13942 1736 aaPredicted RBP24.91■■□□□ 1.58
COL5A1-203ENST00000460264 DALRD3Q5D0E6 543 aaKnown RBP24.9■■□□□ 1.58
COL5A1-203ENST00000460264 RUNDC1Q96C34 613 aa24.9■■□□□ 1.58
COL5A1-203ENST00000460264 RRP7AQ9Y3A4 280 aaKnown RBP24.9■■□□□ 1.58
COL5A1-203ENST00000460264 ADAMTS8Q9UP79 889 aa24.89■■□□□ 1.58
COL5A1-203ENST00000460264 ARHGAP27Q6ZUM4 889 aa24.88■■□□□ 1.57
COL5A1-203ENST00000460264 TSPYL4Q9UJ04 414 aa24.88■■□□□ 1.57
COL5A1-203ENST00000460264 PRR5LQ6MZQ0 368 aa24.87■■□□□ 1.57
COL5A1-203ENST00000460264 CLEC4GQ6UXB4 293 aa24.87■■□□□ 1.57
COL5A1-203ENST00000460264 SETDB2Q96T68 719 aa24.87■■□□□ 1.57
COL5A1-203ENST00000460264 ZNF652Q9Y2D9 606 aa24.86■■□□□ 1.57
COL5A1-203ENST00000460264 NUP98P52948 1817 aa24.85■■□□□ 1.57
COL5A1-203ENST00000460264 RGL2O15211 777 aa24.85■■□□□ 1.57
COL5A1-203ENST00000460264 NEUROD2Q15784 382 aa24.85■■□□□ 1.57
COL5A1-203ENST00000460264 C2CD5Q86YS7 1000 aa24.85■■□□□ 1.57
COL5A1-203ENST00000460264 BABAM1Q9NWV8 329 aa24.85■■□□□ 1.57
COL5A1-203ENST00000460264 SBF1O95248 1867 aa24.85■■□□□ 1.57
COL5A1-203ENST00000460264 CNBD1Q8NA66 436 aa24.84■■□□□ 1.57
COL5A1-203ENST00000460264 CCDC24Q8N4L8 307 aa24.83■■□□□ 1.57
COL5A1-203ENST00000460264 BRIP1Q9BX63 1249 aa24.83■■□□□ 1.57
COL5A1-203ENST00000460264 TRIM35Q9UPQ4 493 aa24.83■■□□□ 1.57
COL5A1-203ENST00000460264 H0YIN7 160 aa24.82■■□□□ 1.56
COL5A1-203ENST00000460264 CACNA1SQ13698 1873 aa24.82■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms