RNA–Protein interactions for RNA: ENST00000460194.1

SRRT-206, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-206ENST00000460194 BCL2L12Q9HB09 334 aa18.04■□□□□ 0.48
SRRT-206ENST00000460194 SLC39A6Q13433 755 aa18.03■□□□□ 0.48
SRRT-206ENST00000460194 USPL1Q5W0Q7 1092 aa18.03■□□□□ 0.48
SRRT-206ENST00000460194 SIPA1L3O60292 1781 aaPredicted RBP18.03■□□□□ 0.48
SRRT-206ENST00000460194 CCDC88AQ3V6T2 1871 aa18.03■□□□□ 0.48
SRRT-206ENST00000460194 TNRC6CQ9HCJ0 1690 aaKnown RBP18.03■□□□□ 0.48
SRRT-206ENST00000460194 DALRD3Q5D0E6 543 aaKnown RBP18.02■□□□□ 0.48
SRRT-206ENST00000460194 NARFQ9UHQ1 456 aa18.02■□□□□ 0.48
SRRT-206ENST00000460194 KIF7Q2M1P5 1343 aa18.01■□□□□ 0.47
SRRT-206ENST00000460194 NFIXQ14938 502 aa18.01■□□□□ 0.47
SRRT-206ENST00000460194 MTHFSDQ2M296 383 aaKnown RBP18.01■□□□□ 0.47
SRRT-206ENST00000460194 RBM46Q8TBY0 533 aaKnown RBP18.01■□□□□ 0.47
SRRT-206ENST00000460194 ANKRD31Q8N7Z5 1873 aa18.01■□□□□ 0.47
SRRT-206ENST00000460194 HMOX1P09601 288 aa18■□□□□ 0.47
SRRT-206ENST00000460194 PRELPP51888 382 aa18■□□□□ 0.47
SRRT-206ENST00000460194 ZBTB1Q9Y2K1 713 aa18■□□□□ 0.47
SRRT-206ENST00000460194 COL15A1P39059 1388 aa18■□□□□ 0.47
SRRT-206ENST00000460194 COL3A1P02461 1466 aaPredicted RBP18■□□□□ 0.47
SRRT-206ENST00000460194 VSIG10Q8N0Z9 540 aa17.99■□□□□ 0.47
SRRT-206ENST00000460194 ZPR1O75312 459 aa17.98■□□□□ 0.47
SRRT-206ENST00000460194 RNF181Q9P0P0 153 aa17.97■□□□□ 0.47
SRRT-206ENST00000460194 PCNTO95613 3336 aa17.97■□□□□ 0.47
SRRT-206ENST00000460194 CARMIL3Q8ND23 1372 aa17.95■□□□□ 0.46
SRRT-206ENST00000460194 EIF5P55010 431 aaKnown RBP17.95■□□□□ 0.46
SRRT-206ENST00000460194 FSTL1Q12841 308 aa17.95■□□□□ 0.46
SRRT-206ENST00000460194 DICER1Q9UPY3 1922 aaKnown RBP17.95■□□□□ 0.46
SRRT-206ENST00000460194 SCN7AQ01118 1682 aa17.95■□□□□ 0.46
SRRT-206ENST00000460194 TIAM2Q8IVF5 1701 aa17.95■□□□□ 0.46
SRRT-206ENST00000460194 FER1L6Q2WGJ9 1857 aa17.95■□□□□ 0.46
SRRT-206ENST00000460194 DIAPH1O60610 1272 aaKnown RBP17.94■□□□□ 0.46
SRRT-206ENST00000460194 SERPINB2P05120 415 aa17.94■□□□□ 0.46
SRRT-206ENST00000460194 HTRA3P83110 453 aa17.94■□□□□ 0.46
SRRT-206ENST00000460194 RASSF7Q02833 373 aa17.94■□□□□ 0.46
SRRT-206ENST00000460194 RRAGCQ9HB90 399 aa17.94■□□□□ 0.46
SRRT-206ENST00000460194 KDM2BQ8NHM5 1336 aa17.94■□□□□ 0.46
SRRT-206ENST00000460194 ZC3H4Q9UPT8 1303 aaKnown RBP17.94■□□□□ 0.46
SRRT-206ENST00000460194 COL11A2P13942 1736 aaPredicted RBP17.93■□□□□ 0.46
SRRT-206ENST00000460194 JMYQ8N9B5 988 aa17.93■□□□□ 0.46
SRRT-206ENST00000460194 IL17REQ8NFR9 667 aa17.93■□□□□ 0.46
SRRT-206ENST00000460194 NPC1L1Q9UHC9 1359 aa17.92■□□□□ 0.46
SRRT-206ENST00000460194 KLRG1Q96E93 195 aa17.91■□□□□ 0.46
SRRT-206ENST00000460194 ZNF496Q96IT1 587 aaPredicted RBP17.91■□□□□ 0.46
SRRT-206ENST00000460194 BCORQ6W2J9 1755 aa17.9■□□□□ 0.46
SRRT-206ENST00000460194 NFKBIEO00221 500 aa17.9■□□□□ 0.46
SRRT-206ENST00000460194 CANXP27824 592 aaKnown RBP17.9■□□□□ 0.46
SRRT-206ENST00000460194 CC2D1BQ5T0F9 858 aaKnown RBP17.9■□□□□ 0.46
SRRT-206ENST00000460194 TTLL6Q8N841 843 aa17.9■□□□□ 0.46
SRRT-206ENST00000460194 CEMIPQ8WUJ3 1361 aa17.9■□□□□ 0.46
SRRT-206ENST00000460194 HEG1Q9ULI3 1381 aa17.9■□□□□ 0.46
SRRT-206ENST00000460194 GLTPD2A6NH11 291 aa17.89■□□□□ 0.45
SRRT-206ENST00000460194 POTECB2RU33 542 aa17.89■□□□□ 0.45
SRRT-206ENST00000460194 LMNB1P20700 586 aa17.89■□□□□ 0.45
SRRT-206ENST00000460194 TBC1D9BQ66K14 1250 aa17.89■□□□□ 0.45
SRRT-206ENST00000460194 ZNF790Q6PG37 636 aa17.89■□□□□ 0.45
SRRT-206ENST00000460194 C2CD5Q86YS7 1000 aa17.88■□□□□ 0.45
SRRT-206ENST00000460194 C16orf71Q8IYS4 520 aaPredicted RBP17.88■□□□□ 0.45
SRRT-206ENST00000460194 CCER1Q8TC90 406 aaPredicted RBP17.88■□□□□ 0.45
SRRT-206ENST00000460194 ARFGEF2Q9Y6D5 1785 aa17.88■□□□□ 0.45
SRRT-206ENST00000460194 SLX4Q8IY92 1834 aa17.87■□□□□ 0.45
SRRT-206ENST00000460194 STARD3NLO95772 234 aa17.87■□□□□ 0.45
SRRT-206ENST00000460194 CACNA1SQ13698 1873 aa17.86■□□□□ 0.45
SRRT-206ENST00000460194 GNAT3A8MTJ3 354 aa17.86■□□□□ 0.45
SRRT-206ENST00000460194 PRR5LQ6MZQ0 368 aa17.86■□□□□ 0.45
SRRT-206ENST00000460194 A0A087WZG4 1122 aa17.85■□□□□ 0.45
SRRT-206ENST00000460194 H0YIN7 160 aa17.85■□□□□ 0.45
SRRT-206ENST00000460194 IL6STP40189 918 aaPredicted RBP17.85■□□□□ 0.45
SRRT-206ENST00000460194 BICDL1Q6ZP65 573 aa17.85■□□□□ 0.45
SRRT-206ENST00000460194 SMC1BQ8NDV3 1235 aa17.85■□□□□ 0.45
SRRT-206ENST00000460194 PHACTR3Q96KR7 559 aa17.85■□□□□ 0.45
SRRT-206ENST00000460194 BRIP1Q9BX63 1249 aa17.85■□□□□ 0.45
SRRT-206ENST00000460194 TEX13AQ9BXU3 409 aaPredicted RBP17.85■□□□□ 0.45
SRRT-206ENST00000460194 KCNQ3O43525 872 aa17.84■□□□□ 0.45
SRRT-206ENST00000460194 VEGFAP15692 232 aaPredicted RBP17.84■□□□□ 0.45
SRRT-206ENST00000460194 TTC5Q8N0Z6 440 aa17.84■□□□□ 0.45
SRRT-206ENST00000460194 GAS2L2Q8NHY3 880 aa17.84■□□□□ 0.45
SRRT-206ENST00000460194 TBC1D2BQ9UPU7 963 aa17.84■□□□□ 0.45
SRRT-206ENST00000460194 CAMTA2O94983 1202 aa17.83■□□□□ 0.44
SRRT-206ENST00000460194 A1BGP04217 495 aa17.83■□□□□ 0.44
SRRT-206ENST00000460194 TEFQ10587 303 aa17.82■□□□□ 0.44
SRRT-206ENST00000460194 COL13A1Q5TAT6 717 aaPredicted RBP17.82■□□□□ 0.44
SRRT-206ENST00000460194 PDZRN3Q9UPQ7 1066 aa17.82■□□□□ 0.44
SRRT-206ENST00000460194 LTBP3Q9NS15 1303 aa17.81■□□□□ 0.44
SRRT-206ENST00000460194 U2SURPO15042 1029 aaKnown RBP17.81■□□□□ 0.44
SRRT-206ENST00000460194 PDE6BP35913 854 aa17.81■□□□□ 0.44
SRRT-206ENST00000460194 CCDC24Q8N4L8 307 aa17.81■□□□□ 0.44
SRRT-206ENST00000460194 RSPH6AQ9H0K4 717 aa17.81■□□□□ 0.44
SRRT-206ENST00000460194 USP16Q9Y5T5 823 aa17.81■□□□□ 0.44
SRRT-206ENST00000460194 C21orf2O43822 256 aa17.8■□□□□ 0.44
SRRT-206ENST00000460194 FMNL2Q96PY5 1086 aa17.8■□□□□ 0.44
SRRT-206ENST00000460194 SRGNP10124 158 aa17.79■□□□□ 0.44
SRRT-206ENST00000460194 C7orf43Q8WVR3 580 aa17.79■□□□□ 0.44
SRRT-206ENST00000460194 PRAMEF22A3QJZ6 481 aa17.78■□□□□ 0.44
SRRT-206ENST00000460194 ZNF622Q969S3 477 aaKnown RBP eCLIP17.78■□□□□ 0.442e-9■■■□□ 17.4
SRRT-206ENST00000460194 PRKAR2BP31323 418 aa17.77■□□□□ 0.44
SRRT-206ENST00000460194 STYK1Q6J9G0 422 aa17.77■□□□□ 0.44
SRRT-206ENST00000460194 KLRG2A4D1S0 409 aaPredicted RBP17.76■□□□□ 0.43
SRRT-206ENST00000460194 BTBD11A6QL63 1104 aa17.76■□□□□ 0.43
SRRT-206ENST00000460194 ERFEQ4G0M1 354 aa17.76■□□□□ 0.43
SRRT-206ENST00000460194 CLEC4GQ6UXB4 293 aa17.76■□□□□ 0.43
SRRT-206ENST00000460194 SETDB2Q96T68 719 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms