RNA–Protein interactions for RNA: ENST00000459904.1

LMNA-209, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 916 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-209ENST00000459904 TM4SF1P30408 202 aa20.53■□□□□ 0.88
LMNA-209ENST00000459904 RASSF7Q02833 373 aa20.53■□□□□ 0.88
LMNA-209ENST00000459904 MTHFSDQ2M296 383 aaKnown RBP20.53■□□□□ 0.88
LMNA-209ENST00000459904 RNF181Q9P0P0 153 aa20.53■□□□□ 0.88
LMNA-209ENST00000459904 ZBTB1Q9Y2K1 713 aa20.53■□□□□ 0.88
LMNA-209ENST00000459904 DLEC1Q9Y238 1755 aa20.53■□□□□ 0.88
LMNA-209ENST00000459904 SOS1Q07889 1333 aaPredicted RBP20.53■□□□□ 0.88
LMNA-209ENST00000459904 KIF7Q2M1P5 1343 aa20.53■□□□□ 0.88
LMNA-209ENST00000459904 DALRD3Q5D0E6 543 aaKnown RBP20.52■□□□□ 0.88
LMNA-209ENST00000459904 NRXN2Q9P2S2 1712 aa20.52■□□□□ 0.88
LMNA-209ENST00000459904 ANKRD31Q8N7Z5 1873 aa20.52■□□□□ 0.87
LMNA-209ENST00000459904 MRC1P22897 1456 aa20.51■□□□□ 0.87
LMNA-209ENST00000459904 ZPR1O75312 459 aa20.51■□□□□ 0.87
LMNA-209ENST00000459904 TOMM70O94826 608 aa20.51■□□□□ 0.87
LMNA-209ENST00000459904 BCL2L12Q9HB09 334 aa20.51■□□□□ 0.87
LMNA-209ENST00000459904 NFIXQ14938 502 aa20.5■□□□□ 0.87
LMNA-209ENST00000459904 SIPA1L3O60292 1781 aaPredicted RBP20.49■□□□□ 0.87
LMNA-209ENST00000459904 CANXP27824 592 aaKnown RBP20.49■□□□□ 0.87
LMNA-209ENST00000459904 PRELPP51888 382 aa20.49■□□□□ 0.87
LMNA-209ENST00000459904 RRAGCQ9HB90 399 aa20.49■□□□□ 0.87
LMNA-209ENST00000459904 COL15A1P39059 1388 aa20.48■□□□□ 0.87
LMNA-209ENST00000459904 CARMIL3Q8ND23 1372 aa20.48■□□□□ 0.87
LMNA-209ENST00000459904 BICDL1Q6ZP65 573 aa20.48■□□□□ 0.87
LMNA-209ENST00000459904 CCDC24Q8N4L8 307 aa20.48■□□□□ 0.87
LMNA-209ENST00000459904 DNAJC5GQ8N7S2 189 aa20.48■□□□□ 0.87
LMNA-209ENST00000459904 TIAM2Q8IVF5 1701 aa20.47■□□□□ 0.87
LMNA-209ENST00000459904 APLP1P51693 650 aa20.47■□□□□ 0.87
LMNA-209ENST00000459904 TNRC6CQ9HCJ0 1690 aaKnown RBP20.47■□□□□ 0.87
LMNA-209ENST00000459904 COL11A2P13942 1736 aaPredicted RBP20.46■□□□□ 0.87
LMNA-209ENST00000459904 PCNTO95613 3336 aa20.45■□□□□ 0.86
LMNA-209ENST00000459904 DIAPH1O60610 1272 aaKnown RBP20.45■□□□□ 0.86
LMNA-209ENST00000459904 NARFQ9UHQ1 456 aa20.45■□□□□ 0.86
LMNA-209ENST00000459904 PER1O15534 1290 aaPredicted RBP20.44■□□□□ 0.86
LMNA-209ENST00000459904 SERPINB2P05120 415 aa20.44■□□□□ 0.86
LMNA-209ENST00000459904 C16orf71Q8IYS4 520 aaPredicted RBP20.44■□□□□ 0.86
LMNA-209ENST00000459904 ZNF219Q9P2Y4 722 aaPredicted RBP20.44■□□□□ 0.86
LMNA-209ENST00000459904 ZNF330Q9Y3S2 320 aaPredicted RBP20.43■□□□□ 0.86
LMNA-209ENST00000459904 COL3A1P02461 1466 aaPredicted RBP20.43■□□□□ 0.86
LMNA-209ENST00000459904 U2SURPO15042 1029 aaKnown RBP20.42■□□□□ 0.86
LMNA-209ENST00000459904 RBM46Q8TBY0 533 aaKnown RBP20.42■□□□□ 0.86
LMNA-209ENST00000459904 DICER1Q9UPY3 1922 aaKnown RBP20.41■□□□□ 0.86
LMNA-209ENST00000459904 C2CD5Q86YS7 1000 aa20.41■□□□□ 0.86
LMNA-209ENST00000459904 IL17REQ8NFR9 667 aa20.41■□□□□ 0.86
LMNA-209ENST00000459904 SCN7AQ01118 1682 aa20.41■□□□□ 0.86
LMNA-209ENST00000459904 KCNQ3O43525 872 aa20.4■□□□□ 0.86
LMNA-209ENST00000459904 TBC1D9BQ66K14 1250 aa20.4■□□□□ 0.86
LMNA-209ENST00000459904 ZNF496Q96IT1 587 aaPredicted RBP20.4■□□□□ 0.86
LMNA-209ENST00000459904 TBC1D2BQ9UPU7 963 aa20.4■□□□□ 0.86
LMNA-209ENST00000459904 FER1L6Q2WGJ9 1857 aa20.39■□□□□ 0.86
LMNA-209ENST00000459904 SLX4Q8IY92 1834 aa20.39■□□□□ 0.86
LMNA-209ENST00000459904 KDM2BQ8NHM5 1336 aa20.39■□□□□ 0.85
LMNA-209ENST00000459904 PIP4K2AP48426 406 aaPredicted RBP20.39■□□□□ 0.85
LMNA-209ENST00000459904 A1BGP04217 495 aa20.38■□□□□ 0.85
LMNA-209ENST00000459904 EIF5P55010 431 aaKnown RBP20.38■□□□□ 0.85
LMNA-209ENST00000459904 TTC5Q8N0Z6 440 aa20.37■□□□□ 0.85
LMNA-209ENST00000459904 BCORQ6W2J9 1755 aa20.36■□□□□ 0.85
LMNA-209ENST00000459904 NFKBIEO00221 500 aa20.36■□□□□ 0.85
LMNA-209ENST00000459904 TTLL6Q8N841 843 aa20.36■□□□□ 0.85
LMNA-209ENST00000459904 ZNF622Q969S3 477 aaKnown RBP eCLIP20.36■□□□□ 0.856e-15■□□□□ 8.5
LMNA-209ENST00000459904 PRAMEF22A3QJZ6 481 aa20.35■□□□□ 0.85
LMNA-209ENST00000459904 VSIG10Q8N0Z9 540 aa20.35■□□□□ 0.85
LMNA-209ENST00000459904 PHACTR3Q96KR7 559 aa20.35■□□□□ 0.85
LMNA-209ENST00000459904 HEG1Q9ULI3 1381 aa20.34■□□□□ 0.85
LMNA-209ENST00000459904 H0YIN7 160 aa20.34■□□□□ 0.85
LMNA-209ENST00000459904 TEFQ10587 303 aa20.34■□□□□ 0.85
LMNA-209ENST00000459904 ZNF790Q6PG37 636 aa20.34■□□□□ 0.85
LMNA-209ENST00000459904 KLRG1Q96E93 195 aa20.34■□□□□ 0.85
LMNA-209ENST00000459904 GNAT3A8MTJ3 354 aa20.33■□□□□ 0.85
LMNA-209ENST00000459904 C21orf2O43822 256 aa20.33■□□□□ 0.85
LMNA-209ENST00000459904 STARD3NLO95772 234 aa20.33■□□□□ 0.85
LMNA-209ENST00000459904 LMNB1P20700 586 aa20.33■□□□□ 0.85
LMNA-209ENST00000459904 FSTL1Q12841 308 aa20.33■□□□□ 0.85
LMNA-209ENST00000459904 PRR5LQ6MZQ0 368 aa20.32■□□□□ 0.84
LMNA-209ENST00000459904 GLTPD2A6NH11 291 aa20.31■□□□□ 0.84
LMNA-209ENST00000459904 POTECB2RU33 542 aa20.31■□□□□ 0.84
LMNA-209ENST00000459904 DLG5Q8TDM6 1919 aa20.3■□□□□ 0.84
LMNA-209ENST00000459904 PRKAR2BP31323 418 aa20.3■□□□□ 0.84
LMNA-209ENST00000459904 COL13A1Q5TAT6 717 aaPredicted RBP20.3■□□□□ 0.84
LMNA-209ENST00000459904 USP16Q9Y5T5 823 aa20.3■□□□□ 0.84
LMNA-209ENST00000459904 ARFGEF2Q9Y6D5 1785 aa20.3■□□□□ 0.84
LMNA-209ENST00000459904 CAMTA2O94983 1202 aa20.29■□□□□ 0.84
LMNA-209ENST00000459904 SMC1BQ8NDV3 1235 aa20.29■□□□□ 0.84
LMNA-209ENST00000459904 GAS2L2Q8NHY3 880 aa20.29■□□□□ 0.84
LMNA-209ENST00000459904 A0A087WZG4 1122 aa20.28■□□□□ 0.84
LMNA-209ENST00000459904 DCTN1Q14203 1278 aa20.28■□□□□ 0.84
LMNA-209ENST00000459904 FMNL2Q96PY5 1086 aa20.28■□□□□ 0.84
LMNA-209ENST00000459904 BTBD11A6QL63 1104 aa20.27■□□□□ 0.84
LMNA-209ENST00000459904 VEGFAP15692 232 aaPredicted RBP20.27■□□□□ 0.84
LMNA-209ENST00000459904 MCM10Q7L590 875 aa20.27■□□□□ 0.84
LMNA-209ENST00000459904 RSPH6AQ9H0K4 717 aa20.27■□□□□ 0.84
LMNA-209ENST00000459904 CAPN15O75808 1086 aa20.26■□□□□ 0.83
LMNA-209ENST00000459904 JMYQ8N9B5 988 aa20.26■□□□□ 0.83
LMNA-209ENST00000459904 BRIP1Q9BX63 1249 aa20.26■□□□□ 0.83
LMNA-209ENST00000459904 CEMIPQ8WUJ3 1361 aa20.25■□□□□ 0.83
LMNA-209ENST00000459904 FAM177BA6PVY3 158 aa20.25■□□□□ 0.83
LMNA-209ENST00000459904 NPHP1O15259 732 aa20.25■□□□□ 0.83
LMNA-209ENST00000459904 POTEIP0CG38 1075 aa20.25■□□□□ 0.83
LMNA-209ENST00000459904 POTEJP0CG39 1038 aa20.25■□□□□ 0.83
LMNA-209ENST00000459904 IL6STP40189 918 aaPredicted RBP20.25■□□□□ 0.83
LMNA-209ENST00000459904 DZIP3Q86Y13 1208 aaKnown RBP20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms