RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 C14orf37Q86TY3 774 aa10.75□□□□□ -0.69
HDAC3-202ENST00000459727 OTUD7AQ8TE49 926 aaPredicted RBP10.75□□□□□ -0.69
HDAC3-202ENST00000459727 DNAAF4Q8WXU2 420 aa10.75□□□□□ -0.69
HDAC3-202ENST00000459727 USP44Q9H0E7 712 aa10.75□□□□□ -0.69
HDAC3-202ENST00000459727 EXOC6BQ9Y2D4 811 aa10.75□□□□□ -0.69
HDAC3-202ENST00000459727 LTBP4Q8N2S1 1624 aa10.75□□□□□ -0.69
HDAC3-202ENST00000459727 TUBGCP6Q96RT7 1819 aa10.74□□□□□ -0.69
HDAC3-202ENST00000459727 TRIM6-TRIM34B2RNG4 842 aa10.74□□□□□ -0.69
HDAC3-202ENST00000459727 APBB1O00213 710 aa10.74□□□□□ -0.69
HDAC3-202ENST00000459727 HIP1O00291 1037 aa10.74□□□□□ -0.69
HDAC3-202ENST00000459727 PHF14O94880 888 aa10.74□□□□□ -0.69
HDAC3-202ENST00000459727 NPHP4O75161 1426 aaPredicted RBP10.74□□□□□ -0.69
HDAC3-202ENST00000459727 PNMA6EA0A0J9YXQ4 647 aa10.73□□□□□ -0.69
HDAC3-202ENST00000459727 GLRX3O76003 335 aaKnown RBP10.73□□□□□ -0.69
HDAC3-202ENST00000459727 CLCN1P35523 988 aa10.73□□□□□ -0.69
HDAC3-202ENST00000459727 HS1BP3Q53T59 392 aa10.73□□□□□ -0.69
HDAC3-202ENST00000459727 ZNF530Q6P9A1 599 aaPredicted RBP10.73□□□□□ -0.69
HDAC3-202ENST00000459727 KIAA1211Q6ZU35 1233 aa10.73□□□□□ -0.69
HDAC3-202ENST00000459727 RBM42Q9BTD8 480 aaKnown RBP10.73□□□□□ -0.69
HDAC3-202ENST00000459727 ANO2Q9NQ90 1003 aa10.73□□□□□ -0.69
HDAC3-202ENST00000459727 RTN4Q9NQC3 1192 aaKnown RBP10.73□□□□□ -0.69
HDAC3-202ENST00000459727 HYPKQ9NX55 129 aa10.73□□□□□ -0.69
HDAC3-202ENST00000459727 BTBD11A6QL63 1104 aa10.72□□□□□ -0.69
HDAC3-202ENST00000459727 SURF6O75683 361 aaKnown RBP10.72□□□□□ -0.69
HDAC3-202ENST00000459727 NCLP19338 710 aaKnown RBP10.72□□□□□ -0.69
HDAC3-202ENST00000459727 NEK4P51957 841 aa10.72□□□□□ -0.69
HDAC3-202ENST00000459727 BEND3Q5T5X7 828 aa10.72□□□□□ -0.69
HDAC3-202ENST00000459727 CLASRPQ8N2M8 674 aaKnown RBP10.72□□□□□ -0.69
HDAC3-202ENST00000459727 RHPN1Q8TCX5 695 aa10.72□□□□□ -0.69
HDAC3-202ENST00000459727 RILPL2Q969X0 211 aa10.72□□□□□ -0.69
HDAC3-202ENST00000459727 ATP6V1DQ9Y5K8 247 aa10.72□□□□□ -0.69
HDAC3-202ENST00000459727 RAD50Q92878 1312 aa10.72□□□□□ -0.69
HDAC3-202ENST00000459727 SRGAP3O43295 1099 aa10.71□□□□□ -0.69
HDAC3-202ENST00000459727 HSPA4P34932 840 aa10.71□□□□□ -0.69
HDAC3-202ENST00000459727 NASPP49321 788 aaPredicted RBP10.71□□□□□ -0.69
HDAC3-202ENST00000459727 CSPP1Q1MSJ5 1256 aa10.71□□□□□ -0.69
HDAC3-202ENST00000459727 ESCO1Q5FWF5 840 aa10.71□□□□□ -0.69
HDAC3-202ENST00000459727 MCTP1Q6DN14 999 aa10.71□□□□□ -0.69
HDAC3-202ENST00000459727 PPP1R42Q7Z4L9 355 aa10.71□□□□□ -0.69
HDAC3-202ENST00000459727 ARHGEF25Q86VW2 580 aa10.71□□□□□ -0.69
HDAC3-202ENST00000459727 LTV1Q96GA3 475 aaPredicted RBP10.71□□□□□ -0.69
HDAC3-202ENST00000459727 TMX3Q96JJ7 454 aa10.71□□□□□ -0.69
HDAC3-202ENST00000459727 WDR33Q9C0J8 1336 aaKnown RBP10.71□□□□□ -0.69
HDAC3-202ENST00000459727 FOXD4L1Q9NU39 408 aa10.71□□□□□ -0.69
HDAC3-202ENST00000459727 ADAMTS7Q9UKP4 1686 aa10.71□□□□□ -0.69
HDAC3-202ENST00000459727 CRYBG1Q9Y4K1 1723 aa10.7□□□□□ -0.7
HDAC3-202ENST00000459727 DCCP43146 1447 aa10.7□□□□□ -0.7
HDAC3-202ENST00000459727 HEG1Q9ULI3 1381 aa10.7□□□□□ -0.7
HDAC3-202ENST00000459727 RNMTO43148 476 aaKnown RBP10.7□□□□□ -0.7
HDAC3-202ENST00000459727 NBPF6Q5VWK0 638 aa10.7□□□□□ -0.7
HDAC3-202ENST00000459727 NBPF4Q96M43 638 aa10.7□□□□□ -0.7
HDAC3-202ENST00000459727 PPP1R9BQ96SB3 815 aa10.7□□□□□ -0.7
HDAC3-202ENST00000459727 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.7□□□□□ -0.7
HDAC3-202ENST00000459727 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.7□□□□□ -0.7
HDAC3-202ENST00000459727 UTYO14607 1347 aa10.69□□□□□ -0.7
HDAC3-202ENST00000459727 SGSM2O43147 1006 aa10.69□□□□□ -0.7
HDAC3-202ENST00000459727 BRD1O95696 1058 aa10.69□□□□□ -0.7
HDAC3-202ENST00000459727 GCP02774 474 aa10.69□□□□□ -0.7
HDAC3-202ENST00000459727 OS9Q13438 667 aaPredicted RBP10.69□□□□□ -0.7
HDAC3-202ENST00000459727 NUTM2GQ5VZR2 741 aa10.69□□□□□ -0.7
HDAC3-202ENST00000459727 KSR2Q6VAB6 950 aa10.69□□□□□ -0.7
HDAC3-202ENST00000459727 TICAM2Q86XR7 235 aa10.69□□□□□ -0.7
HDAC3-202ENST00000459727 LINS1Q8NG48 757 aa10.69□□□□□ -0.7
HDAC3-202ENST00000459727 DIAPH3Q9NSV4 1193 aa10.69□□□□□ -0.7
HDAC3-202ENST00000459727 LMBRD1Q9NUN5 540 aa10.69□□□□□ -0.7
HDAC3-202ENST00000459727 CHPF2Q9P2E5 772 aa10.69□□□□□ -0.7
HDAC3-202ENST00000459727 PI4KAP2A4QPH2 592 aa10.68□□□□□ -0.7
HDAC3-202ENST00000459727 ESPNB1AK53 854 aa10.68□□□□□ -0.7
HDAC3-202ENST00000459727 PLEKHG5O94827 1062 aa10.68□□□□□ -0.7
HDAC3-202ENST00000459727 LETM1O95202 739 aaPredicted RBP10.68□□□□□ -0.7
HDAC3-202ENST00000459727 PI4KAP1Q8N8J0 262 aa10.68□□□□□ -0.7
HDAC3-202ENST00000459727 PI4K2BQ8TCG2 481 aa10.68□□□□□ -0.7
HDAC3-202ENST00000459727 ZSCAN31Q96LW9 406 aaPredicted RBP10.68□□□□□ -0.7
HDAC3-202ENST00000459727 TM6SF1Q9BZW5 370 aa10.68□□□□□ -0.7
HDAC3-202ENST00000459727 C9orf78Q9NZ63 289 aaPredicted RBP10.68□□□□□ -0.7
HDAC3-202ENST00000459727 TRPM3Q9HCF6 1732 aaPredicted RBP10.67□□□□□ -0.7
HDAC3-202ENST00000459727 ADCY9O60503 1353 aa10.67□□□□□ -0.7
HDAC3-202ENST00000459727 COL15A1P39059 1388 aa10.67□□□□□ -0.7
HDAC3-202ENST00000459727 RFX7Q2KHR2 1363 aa10.67□□□□□ -0.7
HDAC3-202ENST00000459727 GIGYF1O75420 1035 aaPredicted RBP10.67□□□□□ -0.7
HDAC3-202ENST00000459727 IFIT2P09913 472 aaKnown RBP10.67□□□□□ -0.7
HDAC3-202ENST00000459727 EIF2S2P20042 333 aaKnown RBP10.67□□□□□ -0.7
HDAC3-202ENST00000459727 NEXNQ0ZGT2 675 aa10.67□□□□□ -0.7
HDAC3-202ENST00000459727 ZSCAN23Q3MJ62 389 aa10.67□□□□□ -0.7
HDAC3-202ENST00000459727 ANKRD24Q8TF21 1146 aa10.67□□□□□ -0.7
HDAC3-202ENST00000459727 NECTIN2Q92692 538 aa10.67□□□□□ -0.7
HDAC3-202ENST00000459727 EVI5LQ96CN4 794 aa10.67□□□□□ -0.7
HDAC3-202ENST00000459727 PANK2Q9BZ23 570 aa10.67□□□□□ -0.7
HDAC3-202ENST00000459727 PHAXQ9H814 394 aaKnown RBP10.67□□□□□ -0.7
HDAC3-202ENST00000459727 DDX21Q9NR30 783 aaKnown RBP eCLIP10.67□□□□□ -0.7
HDAC3-202ENST00000459727 SH2B1Q9NRF2 756 aaPredicted RBP10.67□□□□□ -0.7
HDAC3-202ENST00000459727 ECHDC1Q9NTX5 307 aa10.67□□□□□ -0.7
HDAC3-202ENST00000459727 ZKSCAN1P17029 563 aaPredicted RBP10.66□□□□□ -0.7
HDAC3-202ENST00000459727 MCM5P33992 734 aa10.66□□□□□ -0.7
HDAC3-202ENST00000459727 CAVIN1Q6NZI2 390 aaKnown RBP10.66□□□□□ -0.7
HDAC3-202ENST00000459727 LARP1Q6PKG0 1096 aaKnown RBP10.66□□□□□ -0.7
HDAC3-202ENST00000459727 USHBP1Q8N6Y0 703 aa10.66□□□□□ -0.7
HDAC3-202ENST00000459727 FAM184AQ8NB25 1140 aa10.66□□□□□ -0.7
HDAC3-202ENST00000459727 TMEM87AQ8NBN3 555 aa10.66□□□□□ -0.7
HDAC3-202ENST00000459727 LIMCH1Q9UPQ0 1083 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms