RNA–Protein interactions for RNA: ENST00000457599.6

ARID1A-205, Transcript of AT-rich interaction domain 1A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ARID1A, Length 6,268 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARID1A-205ENST00000457599 GIMAP7Q8NHV1 300 aa19.49■□□□□ 0.71
ARID1A-205ENST00000457599 CABP1Q9NZU7 370 aa19.49■□□□□ 0.71
ARID1A-205ENST00000457599 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.49■□□□□ 0.711e-8■■□□□ 12.2
ARID1A-205ENST00000457599 RRS1Q15050 365 aaKnown RBP19.49■□□□□ 0.71
ARID1A-205ENST00000457599 CRACR2AQ9BSW2 395 aa19.49■□□□□ 0.71
ARID1A-205ENST00000457599 CTNNA2P26232 953 aa19.49■□□□□ 0.71
ARID1A-205ENST00000457599 SPA17Q15506 151 aa19.49■□□□□ 0.71
ARID1A-205ENST00000457599 CEP63Q96MT8 703 aa19.49■□□□□ 0.71
ARID1A-205ENST00000457599 SLC4A8Q2Y0W8 1093 aa19.48■□□□□ 0.71
ARID1A-205ENST00000457599 LARP1Q6PKG0 1096 aaKnown RBP19.48■□□□□ 0.71
ARID1A-205ENST00000457599 TMEM57Q8N5G2 664 aa19.48■□□□□ 0.71
ARID1A-205ENST00000457599 GBP3Q9H0R5 595 aa19.48■□□□□ 0.71
ARID1A-205ENST00000457599 DZIP1Q86YF9 867 aaKnown RBP19.48■□□□□ 0.71
ARID1A-205ENST00000457599 ZSCAN12O43309 604 aa19.48■□□□□ 0.71
ARID1A-205ENST00000457599 SMARCA5O60264 1052 aaPredicted RBP19.48■□□□□ 0.71
ARID1A-205ENST00000457599 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.47■□□□□ 0.71
ARID1A-205ENST00000457599 ANKRD30BQ9BXX2 1392 aa19.47■□□□□ 0.71
ARID1A-205ENST00000457599 FERMT3Q86UX7 667 aa19.47■□□□□ 0.71
ARID1A-205ENST00000457599 MIS18AQ9NYP9 233 aa19.47■□□□□ 0.71
ARID1A-205ENST00000457599 CAVIN4Q5BKX8 364 aa19.47■□□□□ 0.71
ARID1A-205ENST00000457599 RANBP6O60518 1105 aaKnown RBP19.47■□□□□ 0.71
ARID1A-205ENST00000457599 KIF5CO60282 957 aa19.47■□□□□ 0.71
ARID1A-205ENST00000457599 ECM2O94769 699 aaPredicted RBP19.47■□□□□ 0.71
ARID1A-205ENST00000457599 GUCY1B3Q02153 619 aa19.47■□□□□ 0.71
ARID1A-205ENST00000457599 CCDC150Q8NCX0 1101 aa19.47■□□□□ 0.71
ARID1A-205ENST00000457599 HOOK3Q86VS8 718 aa19.46■□□□□ 0.71
ARID1A-205ENST00000457599 FERMT2Q96AC1 680 aa19.46■□□□□ 0.71
ARID1A-205ENST00000457599 CLIP2Q9UDT6 1046 aa19.46■□□□□ 0.71
ARID1A-205ENST00000457599 RTEL1-TNFRSF6BF6WH68 1400 aa19.46■□□□□ 0.71
ARID1A-205ENST00000457599 TSG101Q99816 390 aa19.46■□□□□ 0.71
ARID1A-205ENST00000457599 CGNQ9P2M7 1197 aaKnown RBP19.46■□□□□ 0.71
ARID1A-205ENST00000457599 IFFO1Q0D2I5 559 aa19.45■□□□□ 0.7
ARID1A-205ENST00000457599 PRPF40BQ6NWY9 871 aaKnown RBP19.45■□□□□ 0.7
ARID1A-205ENST00000457599 STARD3NLO95772 234 aa19.45■□□□□ 0.7
ARID1A-205ENST00000457599 MAP9Q49MG5 647 aa19.45■□□□□ 0.7
ARID1A-205ENST00000457599 CUL5Q93034 780 aa19.45■□□□□ 0.7
ARID1A-205ENST00000457599 ANO10Q9NW15 660 aa19.45■□□□□ 0.7
ARID1A-205ENST00000457599 PUF60Q9UHX1 559 aaKnown RBP19.45■□□□□ 0.7
ARID1A-205ENST00000457599 LUZP1Q86V48 1076 aa19.44■□□□□ 0.7
ARID1A-205ENST00000457599 KIF2AO00139 706 aaPredicted RBP19.44■□□□□ 0.7
ARID1A-205ENST00000457599 SFPQP23246 707 aaKnown RBP eCLIP19.44■□□□□ 0.7
ARID1A-205ENST00000457599 FKBP15Q5T1M5 1219 aa19.44■□□□□ 0.7
ARID1A-205ENST00000457599 ZNF444Q8N0Y2 327 aaPredicted RBP19.44■□□□□ 0.7
ARID1A-205ENST00000457599 KIAA0586Q9BVV6 1533 aa19.44■□□□□ 0.7
ARID1A-205ENST00000457599 ARHGEF11O15085 1522 aa19.44■□□□□ 0.7
ARID1A-205ENST00000457599 SMC1AQ14683 1233 aaKnown RBP19.43■□□□□ 0.7
ARID1A-205ENST00000457599 ZNF287Q9HBT7 754 aa19.43■□□□□ 0.7
ARID1A-205ENST00000457599 CPLX3Q8WVH0 158 aa19.43■□□□□ 0.7
ARID1A-205ENST00000457599 ZNF692Q9BU19 519 aaPredicted RBP19.43■□□□□ 0.7
ARID1A-205ENST00000457599 URI1O94763 535 aaPredicted RBP19.43■□□□□ 0.7
ARID1A-205ENST00000457599 MCM3P25205 808 aa19.43■□□□□ 0.7
ARID1A-205ENST00000457599 TDRD12Q587J7 1177 aaKnown RBP19.43■□□□□ 0.7
ARID1A-205ENST00000457599 TOP1P11387 765 aaKnown RBP19.42■□□□□ 0.7
ARID1A-205ENST00000457599 TICAM2Q86XR7 235 aa19.42■□□□□ 0.7
ARID1A-205ENST00000457599 FEZ1Q99689 392 aa19.42■□□□□ 0.7
ARID1A-205ENST00000457599 PLEKHH1Q9ULM0 1364 aa19.42■□□□□ 0.7
ARID1A-205ENST00000457599 PABPN1LA6NDY0 278 aaKnown RBP19.42■□□□□ 0.7
ARID1A-205ENST00000457599 VAT1LQ9HCJ6 419 aa19.42■□□□□ 0.7
ARID1A-205ENST00000457599 MX1P20591 662 aa19.42■□□□□ 0.7
ARID1A-205ENST00000457599 ZNF354CQ86Y25 554 aa19.42■□□□□ 0.7
ARID1A-205ENST00000457599 RPAP2Q8IXW5 612 aaPredicted RBP19.42■□□□□ 0.7
ARID1A-205ENST00000457599 NSD3Q9BZ95 1437 aa19.42■□□□□ 0.7
ARID1A-205ENST00000457599 SLFN5Q08AF3 891 aa19.41■□□□□ 0.7
ARID1A-205ENST00000457599 KIF18AQ8NI77 898 aa19.41■□□□□ 0.7
ARID1A-205ENST00000457599 HOMER2Q9NSB8 354 aa19.41■□□□□ 0.7
ARID1A-205ENST00000457599 EXOC6BQ9Y2D4 811 aa19.41■□□□□ 0.7
ARID1A-205ENST00000457599 PDIA4P13667 645 aaKnown RBP19.41■□□□□ 0.7
ARID1A-205ENST00000457599 NAPBQ9H115 298 aa19.41■□□□□ 0.7
ARID1A-205ENST00000457599 ZNF652Q9Y2D9 606 aa19.41■□□□□ 0.7
ARID1A-205ENST00000457599 POLR3GO15318 223 aaPredicted RBP19.41■□□□□ 0.7
ARID1A-205ENST00000457599 VTI1AQ96AJ9 217 aa19.41■□□□□ 0.7
ARID1A-205ENST00000457599 SAMM50Q9Y512 469 aa19.41■□□□□ 0.7
ARID1A-205ENST00000457599 PLB1Q6P1J6 1458 aa19.41■□□□□ 0.7
ARID1A-205ENST00000457599 IQGAP2Q13576 1575 aa19.41■□□□□ 0.7
ARID1A-205ENST00000457599 RPGRQ92834 1020 aaKnown RBP19.41■□□□□ 0.7
ARID1A-205ENST00000457599 RAB11FIP3O75154 756 aa19.4■□□□□ 0.7
ARID1A-205ENST00000457599 KIF4BQ2VIQ3 1234 aa19.4■□□□□ 0.7
ARID1A-205ENST00000457599 ABCC5O15440 1437 aa19.4■□□□□ 0.7
ARID1A-205ENST00000457599 MPRIPQ6WCQ1 1025 aa19.4■□□□□ 0.7
ARID1A-205ENST00000457599 NUP88Q99567 741 aaPredicted RBP19.4■□□□□ 0.7
ARID1A-205ENST00000457599 BOLA2Q9H3K6 86 aa19.4■□□□□ 0.7
ARID1A-205ENST00000457599 PRPF4BQ13523 1007 aaKnown RBP19.4■□□□□ 0.7
ARID1A-205ENST00000457599 RNF187Q5TA31 235 aaPredicted RBP19.4■□□□□ 0.7
ARID1A-205ENST00000457599 TCERG1LQ5VWI1 586 aa19.4■□□□□ 0.7
ARID1A-205ENST00000457599 MMRN2Q9H8L6 949 aa19.4■□□□□ 0.7
ARID1A-205ENST00000457599 GNAT3A8MTJ3 354 aa19.39■□□□□ 0.7
ARID1A-205ENST00000457599 C6orf229H3BNL8 230 aa19.39■□□□□ 0.7
ARID1A-205ENST00000457599 IFIT1P09914 478 aaKnown RBP19.39■□□□□ 0.7
ARID1A-205ENST00000457599 ARL1P40616 181 aaPredicted RBP19.39■□□□□ 0.7
ARID1A-205ENST00000457599 VPS36Q86VN1 386 aa19.39■□□□□ 0.7
ARID1A-205ENST00000457599 TMOD3Q9NYL9 352 aa19.39■□□□□ 0.7
ARID1A-205ENST00000457599 POGZQ7Z3K3 1410 aa19.39■□□□□ 0.69
ARID1A-205ENST00000457599 NFE2L2Q16236 605 aa19.39■□□□□ 0.69
ARID1A-205ENST00000457599 MYD88Q99836 296 aa19.39■□□□□ 0.69
ARID1A-205ENST00000457599 PTPN23Q9H3S7 1636 aa19.39■□□□□ 0.69
ARID1A-205ENST00000457599 SSFA2P28290 1259 aa19.38■□□□□ 0.69
ARID1A-205ENST00000457599 TRMT1Q9NXH9 659 aaKnown RBP19.38■□□□□ 0.69
ARID1A-205ENST00000457599 MRPS9P82933 396 aaKnown RBP19.38■□□□□ 0.69
ARID1A-205ENST00000457599 CTCFLQ8NI51 663 aaPredicted RBP19.38■□□□□ 0.69
ARID1A-205ENST00000457599 U3KPZ7 1027 aaPredicted RBP19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms