RNA–Protein interactions for RNA: ENST00000457461.1

CUBNP3-201, Transcript of cubilin pseudogene 3, humanhuman

BASIC

Gene CUBNP3, Length 1,784 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBNP3-201ENST00000457461 RRP7AQ9Y3A4 280 aaKnown RBP8.38□□□□□ -1.07
CUBNP3-201ENST00000457461 CPDO75976 1380 aa8.38□□□□□ -1.07
CUBNP3-201ENST00000457461 FRAT2O75474 233 aaPredicted RBP8.38□□□□□ -1.07
CUBNP3-201ENST00000457461 HMOX1P09601 288 aa8.38□□□□□ -1.07
CUBNP3-201ENST00000457461 CALRP27797 417 aaKnown RBP8.38□□□□□ -1.07
CUBNP3-201ENST00000457461 NBPF6Q5VWK0 638 aa8.38□□□□□ -1.07
CUBNP3-201ENST00000457461 NBPF5PQ86XG9 351 aaPredicted RBP8.38□□□□□ -1.07
CUBNP3-201ENST00000457461 AEBP1Q8IUX7 1158 aa8.38□□□□□ -1.07
CUBNP3-201ENST00000457461 DDX17Q92841 729 aaKnown RBP8.38□□□□□ -1.07
CUBNP3-201ENST00000457461 NBPF4Q96M43 638 aa8.38□□□□□ -1.07
CUBNP3-201ENST00000457461 CALCOCO1Q9P1Z2 691 aa8.38□□□□□ -1.07
CUBNP3-201ENST00000457461 COL22A1Q8NFW1 1626 aaPredicted RBP8.38□□□□□ -1.07
CUBNP3-201ENST00000457461 VIRMAQ69YN4 1812 aaKnown RBP8.37□□□□□ -1.07
CUBNP3-201ENST00000457461 SPDYE2BA6NHP3 402 aa8.37□□□□□ -1.07
CUBNP3-201ENST00000457461 SPDYE6P0CI01 402 aa8.37□□□□□ -1.07
CUBNP3-201ENST00000457461 SPDYE2Q495Y8 402 aa8.37□□□□□ -1.07
CUBNP3-201ENST00000457461 EYA1Q99502 592 aa8.37□□□□□ -1.07
CUBNP3-201ENST00000457461 RCAN3Q9UKA8 241 aa8.37□□□□□ -1.07
CUBNP3-201ENST00000457461 CCDC172P0C7W6 258 aa8.36□□□□□ -1.07
CUBNP3-201ENST00000457461 SULT6B1Q6IMI4 303 aa8.36□□□□□ -1.07
CUBNP3-201ENST00000457461 MNS1Q8NEH6 495 aa8.36□□□□□ -1.07
CUBNP3-201ENST00000457461 FEZ1Q99689 392 aa8.36□□□□□ -1.07
CUBNP3-201ENST00000457461 NRDCO43847 1150 aa8.35□□□□□ -1.07
CUBNP3-201ENST00000457461 NEUROD2Q15784 382 aa8.35□□□□□ -1.07
CUBNP3-201ENST00000457461 PPP1R9BQ96SB3 815 aa8.35□□□□□ -1.07
CUBNP3-201ENST00000457461 SSUH2Q9Y2M2 353 aa8.35□□□□□ -1.07
CUBNP3-201ENST00000457461 PLEKHG2Q9H7P9 1386 aa8.35□□□□□ -1.07
CUBNP3-201ENST00000457461 RRP1P56182 461 aaKnown RBP8.35□□□□□ -1.07
CUBNP3-201ENST00000457461 SMC4Q9NTJ3 1288 aa8.35□□□□□ -1.07
CUBNP3-201ENST00000457461 ADAMTS7Q9UKP4 1686 aa8.34□□□□□ -1.07
CUBNP3-201ENST00000457461 COL16A1Q07092 1604 aaPredicted RBP8.34□□□□□ -1.07
CUBNP3-201ENST00000457461 GTF2F1P35269 517 aaKnown RBP eCLIP8.34□□□□□ -1.07
CUBNP3-201ENST00000457461 SASS6Q6UVJ0 657 aa8.34□□□□□ -1.07
CUBNP3-201ENST00000457461 FAM210AQ96ND0 272 aa8.34□□□□□ -1.07
CUBNP3-201ENST00000457461 CGNQ9P2M7 1197 aaKnown RBP8.34□□□□□ -1.07
CUBNP3-201ENST00000457461 IBTKQ9P2D0 1353 aaPredicted RBP8.34□□□□□ -1.07
CUBNP3-201ENST00000457461 ERBB3P21860 1342 aa8.34□□□□□ -1.07
CUBNP3-201ENST00000457461 KIF16BQ96L93 1317 aa8.34□□□□□ -1.07
CUBNP3-201ENST00000457461 CT47B1P0C2W7 299 aaPredicted RBP8.33□□□□□ -1.08
CUBNP3-201ENST00000457461 ZNF853P0CG23 659 aa8.33□□□□□ -1.08
CUBNP3-201ENST00000457461 CCDC173Q0VFZ6 552 aa8.33□□□□□ -1.08
CUBNP3-201ENST00000457461 RPAINQ86UA6 219 aa8.33□□□□□ -1.08
CUBNP3-201ENST00000457461 DONSONQ9NYP3 566 aa8.33□□□□□ -1.08
CUBNP3-201ENST00000457461 PKD1L3Q7Z443 1732 aa8.33□□□□□ -1.08
CUBNP3-201ENST00000457461 ERBB4Q15303 1308 aa8.33□□□□□ -1.08
CUBNP3-201ENST00000457461 GOLIM4O00461 696 aa8.33□□□□□ -1.08
CUBNP3-201ENST00000457461 KIF3CO14782 793 aa8.33□□□□□ -1.08
CUBNP3-201ENST00000457461 BECN1Q14457 450 aa8.33□□□□□ -1.08
CUBNP3-201ENST00000457461 HSP90AB4PQ58FF6 505 aa8.33□□□□□ -1.08
CUBNP3-201ENST00000457461 LMOD2Q6P5Q4 547 aa8.33□□□□□ -1.08
CUBNP3-201ENST00000457461 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.33□□□□□ -1.08
CUBNP3-201ENST00000457461 AXIN2Q9Y2T1 843 aa8.33□□□□□ -1.08
CUBNP3-201ENST00000457461 PHLPP1O60346 1717 aa8.32□□□□□ -1.08
CUBNP3-201ENST00000457461 UQCRHLA0A096LP55 91 aa8.32□□□□□ -1.08
CUBNP3-201ENST00000457461 UQCRHP07919 91 aa8.32□□□□□ -1.08
CUBNP3-201ENST00000457461 KCNJ4P48050 445 aa8.32□□□□□ -1.08
CUBNP3-201ENST00000457461 SEMA3FQ13275 785 aa8.32□□□□□ -1.08
CUBNP3-201ENST00000457461 TSHZ1Q6ZSZ6 1077 aa8.32□□□□□ -1.08
CUBNP3-201ENST00000457461 MED4Q9NPJ6 270 aa8.32□□□□□ -1.08
CUBNP3-201ENST00000457461 IFT57Q9NWB7 429 aa8.32□□□□□ -1.08
CUBNP3-201ENST00000457461 CRB1P82279 1406 aa8.32□□□□□ -1.08
CUBNP3-201ENST00000457461 KIAA0232Q92628 1395 aa8.31□□□□□ -1.08
CUBNP3-201ENST00000457461 SIPA1L3O60292 1781 aaPredicted RBP8.31□□□□□ -1.08
CUBNP3-201ENST00000457461 IRF6O14896 467 aa8.31□□□□□ -1.08
CUBNP3-201ENST00000457461 HTATSF1O43719 755 aaKnown RBP8.31□□□□□ -1.08
CUBNP3-201ENST00000457461 NEFHP12036 1026 aa8.31□□□□□ -1.08
CUBNP3-201ENST00000457461 RBM25P49756 843 aaKnown RBP8.31□□□□□ -1.08
CUBNP3-201ENST00000457461 HMGN5P82970 282 aaKnown RBP8.31□□□□□ -1.08
CUBNP3-201ENST00000457461 MTHFSDQ2M296 383 aaKnown RBP8.31□□□□□ -1.08
CUBNP3-201ENST00000457461 GAS2L2Q8NHY3 880 aa8.31□□□□□ -1.08
CUBNP3-201ENST00000457461 ANKRD24Q8TF21 1146 aa8.31□□□□□ -1.08
CUBNP3-201ENST00000457461 OVOS2A0A0G2JMS6 1433 aa8.3□□□□□ -1.08
CUBNP3-201ENST00000457461 ITFG2Q969R8 447 aa8.3□□□□□ -1.08
CUBNP3-201ENST00000457461 PRIMPOLQ96LW4 560 aa8.3□□□□□ -1.08
CUBNP3-201ENST00000457461 CFAP44Q96MT7 982 aa8.3□□□□□ -1.08
CUBNP3-201ENST00000457461 GRPEL1Q9HAV7 217 aa8.3□□□□□ -1.08
CUBNP3-201ENST00000457461 PARP4Q9UKK3 1724 aaKnown RBP8.3□□□□□ -1.08
CUBNP3-201ENST00000457461 COL14A1Q05707 1796 aaKnown RBP8.3□□□□□ -1.08
CUBNP3-201ENST00000457461 KDM3BQ7LBC6 1761 aa8.3□□□□□ -1.08
CUBNP3-201ENST00000457461 COL5A2P05997 1499 aaPredicted RBP8.3□□□□□ -1.08
CUBNP3-201ENST00000457461 CACNA1FO60840 1977 aa8.3□□□□□ -1.08
CUBNP3-201ENST00000457461 SCN11AQ9UI33 1791 aa8.3□□□□□ -1.08
CUBNP3-201ENST00000457461 MSNP26038 577 aaKnown RBP8.3□□□□□ -1.08
CUBNP3-201ENST00000457461 ZC3H6P61129 1189 aaKnown RBP8.3□□□□□ -1.08
CUBNP3-201ENST00000457461 GNAI1P63096 354 aa8.3□□□□□ -1.08
CUBNP3-201ENST00000457461 TRDNQ13061 729 aa8.3□□□□□ -1.08
CUBNP3-201ENST00000457461 SWT1Q5T5J6 900 aaKnown RBP8.3□□□□□ -1.08
CUBNP3-201ENST00000457461 CABLES1Q8TDN4 633 aa8.3□□□□□ -1.08
CUBNP3-201ENST00000457461 LTV1Q96GA3 475 aaPredicted RBP8.3□□□□□ -1.08
CUBNP3-201ENST00000457461 NBPF3Q9H094 633 aa8.3□□□□□ -1.08
CUBNP3-201ENST00000457461 CEMIPQ8WUJ3 1361 aa8.29□□□□□ -1.08
CUBNP3-201ENST00000457461 MAP3K5Q99683 1374 aa8.29□□□□□ -1.08
CUBNP3-201ENST00000457461 FAM83GA6ND36 823 aa8.29□□□□□ -1.08
CUBNP3-201ENST00000457461 RARSP54136 660 aaKnown RBP8.29□□□□□ -1.08
CUBNP3-201ENST00000457461 MTA1Q13330 715 aa8.29□□□□□ -1.08
CUBNP3-201ENST00000457461 PDCL2Q8N4E4 241 aa8.29□□□□□ -1.08
CUBNP3-201ENST00000457461 TSR2Q969E8 191 aaKnown RBP8.29□□□□□ -1.08
CUBNP3-201ENST00000457461 LRRC59Q96AG4 307 aaKnown RBP8.29□□□□□ -1.08
CUBNP3-201ENST00000457461 SHANK3Q9BYB0 1731 aa8.29□□□□□ -1.08
CUBNP3-201ENST00000457461 PLCH1Q4KWH8 1693 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms