RNA–Protein interactions for RNA: ENST00000457368.2

NEDD1-204, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 2 BASIC

Gene NEDD1, Length 3,162 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-204ENST00000457368 YBX3P16989 372 aaKnown RBP eCLIP3.19□□□□□ -1.9
NEDD1-204ENST00000457368 E2F4Q16254 413 aa3.19□□□□□ -1.9
NEDD1-204ENST00000457368 SLC27A3Q5K4L6 730 aa3.19□□□□□ -1.9
NEDD1-204ENST00000457368 PTF1AQ7RTS3 328 aa3.19□□□□□ -1.9
NEDD1-204ENST00000457368 NGDNQ8NEJ9 315 aaKnown RBP3.19□□□□□ -1.9
NEDD1-204ENST00000457368 CARD10Q9BWT7 1032 aa3.19□□□□□ -1.9
NEDD1-204ENST00000457368 GPBP1L1Q9HC44 474 aaPredicted RBP3.19□□□□□ -1.9
NEDD1-204ENST00000457368 CD2APQ9Y5K6 639 aa3.19□□□□□ -1.9
NEDD1-204ENST00000457368 TNS2Q63HR2 1409 aa3.19□□□□□ -1.9
NEDD1-204ENST00000457368 SOWAHBA6NEL2 793 aa3.18□□□□□ -1.9
NEDD1-204ENST00000457368 HMGB2P26583 209 aaKnown RBP3.18□□□□□ -1.9
NEDD1-204ENST00000457368 WDR17Q8IZU2 1322 aa3.18□□□□□ -1.9
NEDD1-204ENST00000457368 CCDC7Q96M83 1385 aa3.18□□□□□ -1.9
NEDD1-204ENST00000457368 NHSQ6T4R5 1651 aa3.18□□□□□ -1.9
NEDD1-204ENST00000457368 TRIM6-TRIM34B2RNG4 842 aa3.18□□□□□ -1.9
NEDD1-204ENST00000457368 BHMG1C9JSJ3 638 aaPredicted RBP3.18□□□□□ -1.9
NEDD1-204ENST00000457368 GCP02774 474 aa3.18□□□□□ -1.9
NEDD1-204ENST00000457368 ZC3H6P61129 1189 aaKnown RBP3.18□□□□□ -1.9
NEDD1-204ENST00000457368 PACS2Q86VP3 889 aa3.18□□□□□ -1.9
NEDD1-204ENST00000457368 NLRP13Q86W25 1043 aa3.18□□□□□ -1.9
NEDD1-204ENST00000457368 FBXW7Q969H0 707 aa3.18□□□□□ -1.9
NEDD1-204ENST00000457368 KLRG1Q96E93 195 aa3.18□□□□□ -1.9
NEDD1-204ENST00000457368 GFRA3O60609 400 aa3.18□□□□□ -1.9
NEDD1-204ENST00000457368 TOMM70O94826 608 aa3.18□□□□□ -1.9
NEDD1-204ENST00000457368 PRIM1P49642 420 aaKnown RBP3.18□□□□□ -1.9
NEDD1-204ENST00000457368 ZNF827Q17R98 1081 aa3.18□□□□□ -1.9
NEDD1-204ENST00000457368 CFAP70Q5T0N1 1121 aa3.18□□□□□ -1.9
NEDD1-204ENST00000457368 NUDT16Q96DE0 195 aaKnown RBP3.18□□□□□ -1.9
NEDD1-204ENST00000457368 TSHZ2Q9NRE2 1034 aa3.18□□□□□ -1.9
NEDD1-204ENST00000457368 POGKQ9P215 609 aa3.18□□□□□ -1.9
NEDD1-204ENST00000457368 PNPLA7Q6ZV29 1317 aa3.18□□□□□ -1.9
NEDD1-204ENST00000457368 TOPAZ1Q8N9V7 1692 aa3.18□□□□□ -1.9
NEDD1-204ENST00000457368 ITSN1Q15811 1721 aa3.18□□□□□ -1.9
NEDD1-204ENST00000457368 COL18A1P39060 1754 aa3.18□□□□□ -1.9
NEDD1-204ENST00000457368 WNK3Q9BYP7 1800 aa3.17□□□□□ -1.9
NEDD1-204ENST00000457368 ARHGEF28Q8N1W1 1705 aaKnown RBP3.17□□□□□ -1.9
NEDD1-204ENST00000457368 PHF14O94880 888 aa3.17□□□□□ -1.9
NEDD1-204ENST00000457368 XP32Q5T750 250 aa3.17□□□□□ -1.9
NEDD1-204ENST00000457368 COL13A1Q5TAT6 717 aaPredicted RBP3.17□□□□□ -1.9
NEDD1-204ENST00000457368 NLGN2Q8NFZ4 835 aa3.17□□□□□ -1.9
NEDD1-204ENST00000457368 RBM46Q8TBY0 533 aaKnown RBP3.17□□□□□ -1.9
NEDD1-204ENST00000457368 FAM198AQ9UFP1 575 aa3.17□□□□□ -1.9
NEDD1-204ENST00000457368 USP6P35125 1406 aa3.17□□□□□ -1.9
NEDD1-204ENST00000457368 TNFRSF10AO00220 468 aa3.17□□□□□ -1.9
NEDD1-204ENST00000457368 FSTL1Q12841 308 aa3.17□□□□□ -1.9
NEDD1-204ENST00000457368 TNS4Q8IZW8 715 aa3.17□□□□□ -1.9
NEDD1-204ENST00000457368 MTRQ99707 1265 aa3.17□□□□□ -1.9
NEDD1-204ENST00000457368 USP35Q9P2H5 1018 aa3.17□□□□□ -1.9
NEDD1-204ENST00000457368 DAXXQ9UER7 740 aaPredicted RBP3.17□□□□□ -1.9
NEDD1-204ENST00000457368 ACEP12821 1306 aa3.16□□□□□ -1.9
NEDD1-204ENST00000457368 EXOC5O00471 708 aa3.16□□□□□ -1.9
NEDD1-204ENST00000457368 TLL1O43897 1013 aa3.16□□□□□ -1.9
NEDD1-204ENST00000457368 MLLT3P42568 568 aaPredicted RBP3.16□□□□□ -1.9
NEDD1-204ENST00000457368 ARHGEF25Q86VW2 580 aa3.16□□□□□ -1.9
NEDD1-204ENST00000457368 LRRC4BQ9NT99 713 aa3.16□□□□□ -1.9
NEDD1-204ENST00000457368 CPSF1Q10570 1443 aaKnown RBP3.16□□□□□ -1.9
NEDD1-204ENST00000457368 PUS10Q3MIT2 529 aaKnown RBP3.16□□□□□ -1.9
NEDD1-204ENST00000457368 SWT1Q5T5J6 900 aaKnown RBP3.16□□□□□ -1.9
NEDD1-204ENST00000457368 PADI6Q6TGC4 694 aa3.16□□□□□ -1.9
NEDD1-204ENST00000457368 PPIP5K1Q6PFW1 1433 aa3.16□□□□□ -1.9
NEDD1-204ENST00000457368 PPEF1O14829 653 aaPredicted RBP3.16□□□□□ -1.9
NEDD1-204ENST00000457368 ABTB2Q8N961 1025 aa3.16□□□□□ -1.9
NEDD1-204ENST00000457368 TSR3Q9UJK0 312 aaKnown RBP3.16□□□□□ -1.9
NEDD1-204ENST00000457368 PPP1R18Q6NYC8 613 aa3.15□□□□□ -1.9
NEDD1-204ENST00000457368 TOM1L2Q6ZVM7 507 aa3.15□□□□□ -1.9
NEDD1-204ENST00000457368 AKAP12Q02952 1782 aa3.15□□□□□ -1.91
NEDD1-204ENST00000457368 MINK1Q8N4C8 1332 aaPredicted RBP3.15□□□□□ -1.91
NEDD1-204ENST00000457368 PXDNLA1KZ92 1463 aa3.15□□□□□ -1.91
NEDD1-204ENST00000457368 MFSD10Q14728 455 aa3.15□□□□□ -1.91
NEDD1-204ENST00000457368 RGL3Q3MIN7 710 aa3.15□□□□□ -1.91
NEDD1-204ENST00000457368 KCNH5Q8NCM2 988 aa3.15□□□□□ -1.91
NEDD1-204ENST00000457368 FLAD1Q8NFF5 587 aa3.15□□□□□ -1.91
NEDD1-204ENST00000457368 TATDN2Q93075 761 aa3.15□□□□□ -1.91
NEDD1-204ENST00000457368 WDR90Q96KV7 1748 aa3.15□□□□□ -1.91
NEDD1-204ENST00000457368 LOC105371045A0A1W2PR82 267 aa3.14□□□□□ -1.91
NEDD1-204ENST00000457368 CDK19Q9BWU1 502 aa3.14□□□□□ -1.91
NEDD1-204ENST00000457368 SAFB2Q14151 953 aaKnown RBP eCLIP3.14□□□□□ -1.91
NEDD1-204ENST00000457368 MPHOSPH9Q99550 1183 aa3.14□□□□□ -1.91
NEDD1-204ENST00000457368 EPAS1Q99814 870 aa3.14□□□□□ -1.91
NEDD1-204ENST00000457368 TRAK1Q9UPV9 953 aa3.14□□□□□ -1.91
NEDD1-204ENST00000457368 NSD2O96028 1365 aa3.14□□□□□ -1.91
NEDD1-204ENST00000457368 USP31Q70CQ4 1352 aa3.14□□□□□ -1.91
NEDD1-204ENST00000457368 ANKRD36BQ8N2N9 1353 aa3.14□□□□□ -1.91
NEDD1-204ENST00000457368 PLEKHG2Q9H7P9 1386 aa3.14□□□□□ -1.91
NEDD1-204ENST00000457368 NBPF26B4DH59 902 aa3.14□□□□□ -1.91
NEDD1-204ENST00000457368 PRSS12P56730 875 aa3.14□□□□□ -1.91
NEDD1-204ENST00000457368 FOXC1Q12948 553 aa3.14□□□□□ -1.91
NEDD1-204ENST00000457368 HIRIP3Q9BW71 556 aaPredicted RBP3.14□□□□□ -1.91
NEDD1-204ENST00000457368 PRDM10Q9NQV6 1147 aa3.14□□□□□ -1.91
NEDD1-204ENST00000457368 WWC3Q9ULE0 1092 aa3.14□□□□□ -1.91
NEDD1-204ENST00000457368 NFAT5O94916 1531 aa3.14□□□□□ -1.91
NEDD1-204ENST00000457368 TTC21AQ8NDW8 1320 aa3.13□□□□□ -1.91
NEDD1-204ENST00000457368 BTAF1O14981 1849 aa3.13□□□□□ -1.91
NEDD1-204ENST00000457368 RGS19P49795 217 aa3.13□□□□□ -1.91
NEDD1-204ENST00000457368 PDIA6Q15084 440 aa3.13□□□□□ -1.91
NEDD1-204ENST00000457368 NUTM2GQ5VZR2 741 aa3.13□□□□□ -1.91
NEDD1-204ENST00000457368 COL23A1Q86Y22 540 aaPredicted RBP3.13□□□□□ -1.91
NEDD1-204ENST00000457368 PDZRN3Q9UPQ7 1066 aa3.13□□□□□ -1.91
NEDD1-204ENST00000457368 ZC3H4Q9UPT8 1303 aaKnown RBP3.13□□□□□ -1.91
NEDD1-204ENST00000457368 NSD3Q9BZ95 1437 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 125 ms