RNA–Protein interactions for RNA: ENST00000456380.5

TRA2B-206, Transcript of transformer 2 beta homolog, humanhuman

TSL 5

Gene TRA2B, Length 1,697 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-206ENST00000456380 ARFGEF1Q9Y6D6 1849 aa16.83■□□□□ 0.28
TRA2B-206ENST00000456380 PER1O15534 1290 aaPredicted RBP16.82■□□□□ 0.28
TRA2B-206ENST00000456380 RNF181Q9P0P0 153 aa16.82■□□□□ 0.28
TRA2B-206ENST00000456380 NARFQ9UHQ1 456 aa16.82■□□□□ 0.28
TRA2B-206ENST00000456380 ZBTB1Q9Y2K1 713 aa16.82■□□□□ 0.28
TRA2B-206ENST00000456380 NFIXQ14938 502 aa16.81■□□□□ 0.28
TRA2B-206ENST00000456380 KCPQ6ZWJ8 1503 aa16.81■□□□□ 0.28
TRA2B-206ENST00000456380 RBM46Q8TBY0 533 aaKnown RBP16.81■□□□□ 0.28
TRA2B-206ENST00000456380 BCL2L12Q9HB09 334 aa16.81■□□□□ 0.28
TRA2B-206ENST00000456380 DIAPH1O60610 1272 aaKnown RBP16.8■□□□□ 0.28
TRA2B-206ENST00000456380 VSIG10Q8N0Z9 540 aa16.8■□□□□ 0.28
TRA2B-206ENST00000456380 COL15A1P39059 1388 aa16.8■□□□□ 0.28
TRA2B-206ENST00000456380 CC2D1BQ5T0F9 858 aaKnown RBP16.79■□□□□ 0.28
TRA2B-206ENST00000456380 SERPINB2P05120 415 aa16.78■□□□□ 0.28
TRA2B-206ENST00000456380 C16orf71Q8IYS4 520 aaPredicted RBP16.78■□□□□ 0.28
TRA2B-206ENST00000456380 KDM2BQ8NHM5 1336 aa16.78■□□□□ 0.28
TRA2B-206ENST00000456380 RRAGCQ9HB90 399 aa16.78■□□□□ 0.28
TRA2B-206ENST00000456380 CANXP27824 592 aaKnown RBP16.77■□□□□ 0.28
TRA2B-206ENST00000456380 RASSF7Q02833 373 aa16.77■□□□□ 0.28
TRA2B-206ENST00000456380 EIF5P55010 431 aaKnown RBP16.76■□□□□ 0.27
TRA2B-206ENST00000456380 HTRA3P83110 453 aa16.76■□□□□ 0.27
TRA2B-206ENST00000456380 FSTL1Q12841 308 aa16.76■□□□□ 0.27
TRA2B-206ENST00000456380 PRELPP51888 382 aa16.75■□□□□ 0.27
TRA2B-206ENST00000456380 IL17REQ8NFR9 667 aa16.75■□□□□ 0.27
TRA2B-206ENST00000456380 STARD3NLO95772 234 aa16.75■□□□□ 0.27
TRA2B-206ENST00000456380 TTLL6Q8N841 843 aa16.75■□□□□ 0.27
TRA2B-206ENST00000456380 AFDNP55196 1824 aaKnown RBP16.75■□□□□ 0.27
TRA2B-206ENST00000456380 SBF1O95248 1867 aa16.74■□□□□ 0.27
TRA2B-206ENST00000456380 NRXN2Q9P2S2 1712 aa16.74■□□□□ 0.27
TRA2B-206ENST00000456380 BICDL1Q6ZP65 573 aa16.74■□□□□ 0.27
TRA2B-206ENST00000456380 C2CD5Q86YS7 1000 aa16.74■□□□□ 0.27
TRA2B-206ENST00000456380 TTC5Q8N0Z6 440 aa16.74■□□□□ 0.27
TRA2B-206ENST00000456380 ZNF496Q96IT1 587 aaPredicted RBP16.74■□□□□ 0.27
TRA2B-206ENST00000456380 CARMIL3Q8ND23 1372 aa16.74■□□□□ 0.27
TRA2B-206ENST00000456380 LMNB1P20700 586 aa16.73■□□□□ 0.27
TRA2B-206ENST00000456380 VIRMAQ69YN4 1812 aaKnown RBP16.73■□□□□ 0.27
TRA2B-206ENST00000456380 COL3A1P02461 1466 aaPredicted RBP16.73■□□□□ 0.27
TRA2B-206ENST00000456380 GNAT3A8MTJ3 354 aa16.72■□□□□ 0.27
TRA2B-206ENST00000456380 H0YIN7 160 aa16.72■□□□□ 0.27
TRA2B-206ENST00000456380 U2SURPO15042 1029 aaKnown RBP16.72■□□□□ 0.27
TRA2B-206ENST00000456380 CNGB1Q14028 1251 aaPredicted RBP16.72■□□□□ 0.27
TRA2B-206ENST00000456380 ZNF790Q6PG37 636 aa16.72■□□□□ 0.27
TRA2B-206ENST00000456380 ZC3H4Q9UPT8 1303 aaKnown RBP16.72■□□□□ 0.27
TRA2B-206ENST00000456380 UBR2Q8IWV8 1755 aa16.72■□□□□ 0.27
TRA2B-206ENST00000456380 TEFQ10587 303 aa16.72■□□□□ 0.27
TRA2B-206ENST00000456380 TBC1D9BQ66K14 1250 aa16.72■□□□□ 0.27
TRA2B-206ENST00000456380 HEG1Q9ULI3 1381 aa16.71■□□□□ 0.27
TRA2B-206ENST00000456380 A0A087WZG4 1122 aa16.71■□□□□ 0.27
TRA2B-206ENST00000456380 NFKBIEO00221 500 aa16.71■□□□□ 0.27
TRA2B-206ENST00000456380 GAS2L2Q8NHY3 880 aa16.71■□□□□ 0.27
TRA2B-206ENST00000456380 KLRG1Q96E93 195 aa16.71■□□□□ 0.27
TRA2B-206ENST00000456380 WDR90Q96KV7 1748 aa16.7■□□□□ 0.26
TRA2B-206ENST00000456380 GLTPD2A6NH11 291 aa16.7■□□□□ 0.26
TRA2B-206ENST00000456380 TEX13AQ9BXU3 409 aaPredicted RBP16.7■□□□□ 0.26
TRA2B-206ENST00000456380 TBC1D2BQ9UPU7 963 aa16.7■□□□□ 0.26
TRA2B-206ENST00000456380 NPC1L1Q9UHC9 1359 aa16.7■□□□□ 0.26
TRA2B-206ENST00000456380 SMC1BQ8NDV3 1235 aa16.69■□□□□ 0.26
TRA2B-206ENST00000456380 IL6STP40189 918 aaPredicted RBP16.69■□□□□ 0.26
TRA2B-206ENST00000456380 CCDC24Q8N4L8 307 aa16.69■□□□□ 0.26
TRA2B-206ENST00000456380 JMYQ8N9B5 988 aa16.69■□□□□ 0.26
TRA2B-206ENST00000456380 BRIP1Q9BX63 1249 aa16.69■□□□□ 0.26
TRA2B-206ENST00000456380 ZNF330Q9Y3S2 320 aaPredicted RBP16.69■□□□□ 0.26
TRA2B-206ENST00000456380 DLEC1Q9Y238 1755 aa16.68■□□□□ 0.26
TRA2B-206ENST00000456380 TNRC6CQ9HCJ0 1690 aaKnown RBP16.68■□□□□ 0.26
TRA2B-206ENST00000456380 A1BGP04217 495 aa16.68■□□□□ 0.26
TRA2B-206ENST00000456380 VEGFAP15692 232 aaPredicted RBP16.68■□□□□ 0.26
TRA2B-206ENST00000456380 PRR5LQ6MZQ0 368 aa16.68■□□□□ 0.26
TRA2B-206ENST00000456380 ZNF622Q969S3 477 aaKnown RBP eCLIP16.68■□□□□ 0.262e-6■□□□□ 11.1
TRA2B-206ENST00000456380 PHACTR3Q96KR7 559 aa16.68■□□□□ 0.26
TRA2B-206ENST00000456380 FMNL2Q96PY5 1086 aa16.68■□□□□ 0.26
TRA2B-206ENST00000456380 CEMIPQ8WUJ3 1361 aa16.67■□□□□ 0.26
TRA2B-206ENST00000456380 KCNQ3O43525 872 aa16.67■□□□□ 0.26
TRA2B-206ENST00000456380 PDE6BP35913 854 aa16.66■□□□□ 0.26
TRA2B-206ENST00000456380 POTECB2RU33 542 aa16.65■□□□□ 0.26
TRA2B-206ENST00000456380 C21orf2O43822 256 aa16.65■□□□□ 0.26
TRA2B-206ENST00000456380 CAMTA2O94983 1202 aa16.65■□□□□ 0.26
TRA2B-206ENST00000456380 ZNF219Q9P2Y4 722 aaPredicted RBP16.65■□□□□ 0.26
TRA2B-206ENST00000456380 PDZRN3Q9UPQ7 1066 aa16.65■□□□□ 0.26
TRA2B-206ENST00000456380 BTBD11A6QL63 1104 aa16.65■□□□□ 0.26
TRA2B-206ENST00000456380 PRKAR2BP31323 418 aa16.65■□□□□ 0.26
TRA2B-206ENST00000456380 RSPH6AQ9H0K4 717 aa16.65■□□□□ 0.26
TRA2B-206ENST00000456380 SETDB2Q96T68 719 aa16.64■□□□□ 0.25
TRA2B-206ENST00000456380 SIPA1L3O60292 1781 aaPredicted RBP16.64■□□□□ 0.25
TRA2B-206ENST00000456380 ANKRD31Q8N7Z5 1873 aa16.64■□□□□ 0.25
TRA2B-206ENST00000456380 USP16Q9Y5T5 823 aa16.63■□□□□ 0.25
TRA2B-206ENST00000456380 PIP4K2AP48426 406 aaPredicted RBP16.62■□□□□ 0.25
TRA2B-206ENST00000456380 COL13A1Q5TAT6 717 aaPredicted RBP16.62■□□□□ 0.25
TRA2B-206ENST00000456380 NPM2Q86SE8 214 aaKnown RBP16.62■□□□□ 0.25
TRA2B-206ENST00000456380 CNBD1Q8NA66 436 aa16.62■□□□□ 0.25
TRA2B-206ENST00000456380 SCN7AQ01118 1682 aa16.62■□□□□ 0.25
TRA2B-206ENST00000456380 PRAMEF22A3QJZ6 481 aa16.62■□□□□ 0.25
TRA2B-206ENST00000456380 ERFEQ4G0M1 354 aa16.62■□□□□ 0.25
TRA2B-206ENST00000456380 DPY19L2Q6NUT2 758 aa16.62■□□□□ 0.25
TRA2B-206ENST00000456380 DZIP3Q86Y13 1208 aaKnown RBP16.62■□□□□ 0.25
TRA2B-206ENST00000456380 CCDC88AQ3V6T2 1871 aa16.61■□□□□ 0.25
TRA2B-206ENST00000456380 SRGNP10124 158 aa16.61■□□□□ 0.25
TRA2B-206ENST00000456380 TIAM2Q8IVF5 1701 aa16.6■□□□□ 0.25
TRA2B-206ENST00000456380 STYK1Q6J9G0 422 aa16.6■□□□□ 0.25
TRA2B-206ENST00000456380 CNKSR1Q969H4 720 aa16.6■□□□□ 0.25
TRA2B-206ENST00000456380 CFAP53Q96M91 514 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms