RNA–Protein interactions for RNA: ENST00000456331.6

PPP1R9A-208, Transcript of protein phosphatase 1 regulatory subunit 9A, human

TSL 1 (best) BASIC

Gene PPP1R9A, Length 10,090 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP1R9A-208	ENST00000456331	PPP2R1A	P30153	589 aa		4.65	□□□□□ -1.67
PPP1R9A-208	ENST00000456331	IQCA1	Q86XH1	822 aa		4.65	□□□□□ -1.67
PPP1R9A-208	ENST00000456331	TCP11L2	Q8N4U5	519 aa		4.65	□□□□□ -1.67
PPP1R9A-208	ENST00000456331	CEP126	Q9P2H0	1117 aa		4.65	□□□□□ -1.67
PPP1R9A-208	ENST00000456331	HDAC9	Q9UKV0	1011 aa		4.65	□□□□□ -1.67
PPP1R9A-208	ENST00000456331	FAM135A	Q9P2D6	1515 aa		4.64	□□□□□ -1.67
PPP1R9A-208	ENST00000456331	LRPPRC	P42704	1394 aa	Known RBP	4.64	□□□□□ -1.67
PPP1R9A-208	ENST00000456331	VIM	P08670	466 aa	Known RBP	4.64	□□□□□ -1.67
PPP1R9A-208	ENST00000456331	CFAP100	Q494V2	611 aa		4.64	□□□□□ -1.67
PPP1R9A-208	ENST00000456331	CACNA2D4	Q7Z3S7	1137 aa		4.64	□□□□□ -1.67
PPP1R9A-208	ENST00000456331	ATP5D	P30049	168 aa		4.64	□□□□□ -1.67
PPP1R9A-208	ENST00000456331	HSPA4	P34932	840 aa		4.64	□□□□□ -1.67
PPP1R9A-208	ENST00000456331	PDE4C	Q08493	712 aa		4.64	□□□□□ -1.67
PPP1R9A-208	ENST00000456331	IFFO1	Q0D2I5	559 aa		4.64	□□□□□ -1.67
PPP1R9A-208	ENST00000456331	CTCFL	Q8NI51	663 aa	Predicted RBP	4.64	□□□□□ -1.67
PPP1R9A-208	ENST00000456331	FERMT2	Q96AC1	680 aa		4.64	□□□□□ -1.67
PPP1R9A-208	ENST00000456331	LRRFIP2	Q9Y608	721 aa	Known RBP	4.64	□□□□□ -1.67
PPP1R9A-208	ENST00000456331	ITSN2	Q9NZM3	1697 aa		4.64	□□□□□ -1.67
PPP1R9A-208	ENST00000456331	TRO	Q12816	1431 aa	Predicted RBP	4.64	□□□□□ -1.67
PPP1R9A-208	ENST00000456331	C9orf84	Q5VXU9	1444 aa		4.64	□□□□□ -1.67
PPP1R9A-208	ENST00000456331	KIF14	Q15058	1648 aa		4.64	□□□□□ -1.67
PPP1R9A-208	ENST00000456331	CLIP2	Q9UDT6	1046 aa		4.64	□□□□□ -1.67
PPP1R9A-208	ENST00000456331	RRP7A	Q9Y3A4	280 aa	Known RBP	4.64	□□□□□ -1.67
PPP1R9A-208	ENST00000456331	FIBP	O43427	364 aa		4.64	□□□□□ -1.67
PPP1R9A-208	ENST00000456331	STARD3NL	O95772	234 aa		4.64	□□□□□ -1.67
PPP1R9A-208	ENST00000456331	ACTN2	P35609	894 aa		4.64	□□□□□ -1.67
PPP1R9A-208	ENST00000456331	UBE2H	P62256	183 aa		4.64	□□□□□ -1.67
PPP1R9A-208	ENST00000456331	NBPF1	Q3BBV0	1214 aa		4.64	□□□□□ -1.67
PPP1R9A-208	ENST00000456331	DAAM2	Q86T65	1068 aa		4.64	□□□□□ -1.67
PPP1R9A-208	ENST00000456331	SMARCC1	Q92922	1105 aa	Predicted RBP	4.64	□□□□□ -1.67
PPP1R9A-208	ENST00000456331	NAP1L4	Q99733	375 aa	Known RBP	4.64	□□□□□ -1.67
PPP1R9A-208	ENST00000456331	TSGA10	Q9BZW7	698 aa		4.64	□□□□□ -1.67
PPP1R9A-208	ENST00000456331	PDZRN3	Q9UPQ7	1066 aa		4.64	□□□□□ -1.67
PPP1R9A-208	ENST00000456331	CCDC14	Q49A88	953 aa		4.64	□□□□□ -1.67
PPP1R9A-208	ENST00000456331	HDGFL1	Q5TGJ6	251 aa		4.64	□□□□□ -1.67
PPP1R9A-208	ENST00000456331	LARP1	Q6PKG0	1096 aa	Known RBP	4.64	□□□□□ -1.67
PPP1R9A-208	ENST00000456331	CERS3	Q8IU89	383 aa		4.64	□□□□□ -1.67
PPP1R9A-208	ENST00000456331	RNF214	Q8ND24	703 aa		4.64	□□□□□ -1.67
PPP1R9A-208	ENST00000456331	LTV1	Q96GA3	475 aa	Predicted RBP	4.64	□□□□□ -1.67
PPP1R9A-208	ENST00000456331	TMOD2	Q9NZR1	351 aa		4.64	□□□□□ -1.67
PPP1R9A-208	ENST00000456331	TTC21B	Q7Z4L5	1316 aa		4.64	□□□□□ -1.67
PPP1R9A-208	ENST00000456331	ALDH3A1	P30838	453 aa		4.64	□□□□□ -1.67
PPP1R9A-208	ENST00000456331	IGHMBP2	P38935	993 aa	Known RBP	4.64	□□□□□ -1.67
PPP1R9A-208	ENST00000456331	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	4.64	□□□□□ -1.67
PPP1R9A-208	ENST00000456331	OSCAR	Q8IYS5	282 aa		4.64	□□□□□ -1.67
PPP1R9A-208	ENST00000456331	CNPY4	Q8N129	248 aa		4.64	□□□□□ -1.67
PPP1R9A-208	ENST00000456331	ANKRD24	Q8TF21	1146 aa		4.64	□□□□□ -1.67
PPP1R9A-208	ENST00000456331	MPHOSPH8	Q99549	860 aa		4.64	□□□□□ -1.67
PPP1R9A-208	ENST00000456331	PABPN1L	A6NDY0	278 aa	Known RBP	4.64	□□□□□ -1.67
PPP1R9A-208	ENST00000456331	TIGD1	Q96MW7	591 aa		4.64	□□□□□ -1.67
PPP1R9A-208	ENST00000456331	MAP4K4	O95819	1239 aa	Predicted RBP	4.63	□□□□□ -1.67
PPP1R9A-208	ENST00000456331	DNAJC21	Q5F1R6	531 aa	Known RBP	4.63	□□□□□ -1.67
PPP1R9A-208	ENST00000456331	TAX1BP1	Q86VP1	789 aa		4.63	□□□□□ -1.67
PPP1R9A-208	ENST00000456331	CUL5	Q93034	780 aa		4.63	□□□□□ -1.67
PPP1R9A-208	ENST00000456331	CALML4	Q96GE6	196 aa		4.63	□□□□□ -1.67
PPP1R9A-208	ENST00000456331	HAUS2	Q9NVX0	235 aa		4.63	□□□□□ -1.67
PPP1R9A-208	ENST00000456331	KIF3C	O14782	793 aa		4.63	□□□□□ -1.67
PPP1R9A-208	ENST00000456331	RAD21	O60216	631 aa		4.63	□□□□□ -1.67
PPP1R9A-208	ENST00000456331	CYLC1	P35663	651 aa	Predicted RBP	4.63	□□□□□ -1.67
PPP1R9A-208	ENST00000456331	DUSP27	Q5VZP5	1158 aa		4.63	□□□□□ -1.67
PPP1R9A-208	ENST00000456331	ARHGAP45	Q92619	1136 aa		4.63	□□□□□ -1.67
PPP1R9A-208	ENST00000456331	TCP11L1	Q9NUJ3	509 aa		4.63	□□□□□ -1.67
PPP1R9A-208	ENST00000456331	RAD50	Q92878	1312 aa		4.63	□□□□□ -1.67
PPP1R9A-208	ENST00000456331		B4DLN1	442 aa		4.63	□□□□□ -1.67
PPP1R9A-208	ENST00000456331	ZFY	P08048	801 aa	Predicted RBP	4.63	□□□□□ -1.67
PPP1R9A-208	ENST00000456331	MTHFS	P49914	203 aa		4.63	□□□□□ -1.67
PPP1R9A-208	ENST00000456331	MRPL12	P52815	198 aa	Known RBP	4.63	□□□□□ -1.67
PPP1R9A-208	ENST00000456331	KRT83	P78385	493 aa		4.63	□□□□□ -1.67
PPP1R9A-208	ENST00000456331	BICDL1	Q6ZP65	573 aa		4.63	□□□□□ -1.67
PPP1R9A-208	ENST00000456331	PUS7	Q96PZ0	661 aa	Known RBP	4.63	□□□□□ -1.67
PPP1R9A-208	ENST00000456331	BCL2L13	Q9BXK5	485 aa		4.63	□□□□□ -1.67
PPP1R9A-208	ENST00000456331	IKBKG	Q9Y6K9	419 aa		4.63	□□□□□ -1.67
PPP1R9A-208	ENST00000456331	MINK1	Q8N4C8	1332 aa	Predicted RBP	4.63	□□□□□ -1.67
PPP1R9A-208	ENST00000456331	IGF1R	P08069	1367 aa		4.63	□□□□□ -1.67
PPP1R9A-208	ENST00000456331	HSF2BP	O75031	334 aa		4.63	□□□□□ -1.67
PPP1R9A-208	ENST00000456331	NBPF7	P0C2Y1	421 aa	Predicted RBP	4.63	□□□□□ -1.67
PPP1R9A-208	ENST00000456331	GNAQ	P50148	359 aa		4.63	□□□□□ -1.67
PPP1R9A-208	ENST00000456331	TERF1	P54274	439 aa		4.63	□□□□□ -1.67
PPP1R9A-208	ENST00000456331	KLHL40	Q2TBA0	621 aa		4.63	□□□□□ -1.67
PPP1R9A-208	ENST00000456331	MSANTD4	Q8NCY6	345 aa		4.63	□□□□□ -1.67
PPP1R9A-208	ENST00000456331	EVI5L	Q96CN4	794 aa		4.63	□□□□□ -1.67
PPP1R9A-208	ENST00000456331	ZGPAT	Q8N5A5	531 aa	Known RBP	4.63	□□□□□ -1.67
PPP1R9A-208	ENST00000456331	NAP1L3	Q99457	506 aa	Predicted RBP	4.63	□□□□□ -1.67
PPP1R9A-208	ENST00000456331	CCDC6	Q16204	474 aa		4.63	□□□□□ -1.67
PPP1R9A-208	ENST00000456331	ERCC6L	Q2NKX8	1250 aa		4.63	□□□□□ -1.67
PPP1R9A-208	ENST00000456331	CAVIN4	Q5BKX8	364 aa		4.63	□□□□□ -1.67
PPP1R9A-208	ENST00000456331	LIMCH1	Q9UPQ0	1083 aa		4.63	□□□□□ -1.67
PPP1R9A-208	ENST00000456331	MAP3K12	Q12852	859 aa		4.63	□□□□□ -1.67
PPP1R9A-208	ENST00000456331	KIF4B	Q2VIQ3	1234 aa		4.63	□□□□□ -1.67
PPP1R9A-208	ENST00000456331	LDHC	P07864	332 aa		4.63	□□□□□ -1.67
PPP1R9A-208	ENST00000456331	ATP2A2	P16615	1042 aa	Known RBP	4.63	□□□□□ -1.67
PPP1R9A-208	ENST00000456331	NUP160	Q12769	1436 aa		4.63	□□□□□ -1.67
PPP1R9A-208	ENST00000456331	MAP7	Q14244	749 aa		4.63	□□□□□ -1.67
PPP1R9A-208	ENST00000456331	BMP2KL	Q5H9B9	411 aa		4.63	□□□□□ -1.67
PPP1R9A-208	ENST00000456331	SPTY2D1	Q68D10	685 aa	Predicted RBP	4.63	□□□□□ -1.67
PPP1R9A-208	ENST00000456331	KCNG4	Q8TDN1	519 aa		4.63	□□□□□ -1.67
PPP1R9A-208	ENST00000456331	ZMYM3	Q14202	1370 aa		4.62	□□□□□ -1.67
PPP1R9A-208	ENST00000456331	SPATS2	Q86XZ4	545 aa	Known RBP	4.62	□□□□□ -1.67
PPP1R9A-208	ENST00000456331	KRT222	Q8N1A0	295 aa		4.62	□□□□□ -1.67
PPP1R9A-208	ENST00000456331	STRN4	Q9NRL3	753 aa		4.62	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms