RNA–Protein interactions for RNA: ENST00000455403.1

SAMM50P1-201, Transcript of SAMM50 sorting and assembly machinery component pseudogene 1, humanhuman

BASIC

Gene SAMM50P1, Length 1,399 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50P1-201ENST00000455403 PRG4Q92954 1404 aaPredicted RBP8.3□□□□□ -1.08
SAMM50P1-201ENST00000455403 GLI2P10070 1586 aa8.3□□□□□ -1.08
SAMM50P1-201ENST00000455403 WDR97A6NE52 1622 aa8.3□□□□□ -1.08
SAMM50P1-201ENST00000455403 SHROOM2Q13796 1616 aa8.3□□□□□ -1.08
SAMM50P1-201ENST00000455403 SFI1A8K8P3 1242 aa8.3□□□□□ -1.08
SAMM50P1-201ENST00000455403 C21orf2O43822 256 aa8.3□□□□□ -1.08
SAMM50P1-201ENST00000455403 MCCD1P59942 119 aaPredicted RBP8.3□□□□□ -1.08
SAMM50P1-201ENST00000455403 ARHGAP4P98171 946 aa8.3□□□□□ -1.08
SAMM50P1-201ENST00000455403 TRIM67Q6ZTA4 783 aa8.3□□□□□ -1.08
SAMM50P1-201ENST00000455403 GTF3C2Q8WUA4 911 aaPredicted RBP8.3□□□□□ -1.08
SAMM50P1-201ENST00000455403 MKNK1Q9BUB5 465 aa8.3□□□□□ -1.08
SAMM50P1-201ENST00000455403 RGS17Q9UGC6 210 aaPredicted RBP8.3□□□□□ -1.08
SAMM50P1-201ENST00000455403 CDV3Q9UKY7 258 aaKnown RBP8.3□□□□□ -1.08
SAMM50P1-201ENST00000455403 NOD1Q9Y239 953 aa8.3□□□□□ -1.08
SAMM50P1-201ENST00000455403 MADDQ8WXG6 1647 aa8.29□□□□□ -1.08
SAMM50P1-201ENST00000455403 PPM1GO15355 546 aaPredicted RBP8.29□□□□□ -1.08
SAMM50P1-201ENST00000455403 ERCC5P28715 1186 aaPredicted RBP8.29□□□□□ -1.08
SAMM50P1-201ENST00000455403 SEC13P55735 322 aa8.29□□□□□ -1.08
SAMM50P1-201ENST00000455403 CAPN12Q6ZSI9 719 aa8.29□□□□□ -1.08
SAMM50P1-201ENST00000455403 SLC10A4Q96EP9 437 aa8.29□□□□□ -1.08
SAMM50P1-201ENST00000455403 CCDC85AQ96PX6 553 aaPredicted RBP8.29□□□□□ -1.08
SAMM50P1-201ENST00000455403 CDK15Q96Q40 435 aa8.29□□□□□ -1.08
SAMM50P1-201ENST00000455403 ARID4BQ4LE39 1312 aaPredicted RBP8.29□□□□□ -1.08
SAMM50P1-201ENST00000455403 GTF2IP78347 998 aa8.28□□□□□ -1.08
SAMM50P1-201ENST00000455403 PIP4K2BP78356 416 aa8.28□□□□□ -1.08
SAMM50P1-201ENST00000455403 BACH2Q9BYV9 841 aa8.28□□□□□ -1.08
SAMM50P1-201ENST00000455403 TLL2Q9Y6L7 1015 aa8.28□□□□□ -1.08
SAMM50P1-201ENST00000455403 PRDM2Q13029 1718 aa8.27□□□□□ -1.09
SAMM50P1-201ENST00000455403 HDLBPQ00341 1268 aaKnown RBP8.27□□□□□ -1.09
SAMM50P1-201ENST00000455403 FOXC1Q12948 553 aa8.27□□□□□ -1.09
SAMM50P1-201ENST00000455403 SF3A1Q15459 793 aaKnown RBP8.27□□□□□ -1.09
SAMM50P1-201ENST00000455403 EAPPQ56P03 285 aaPredicted RBP8.27□□□□□ -1.09
SAMM50P1-201ENST00000455403 OXLD1Q5BKU9 147 aa8.27□□□□□ -1.09
SAMM50P1-201ENST00000455403 C9orf131Q5VYM1 1079 aa8.27□□□□□ -1.09
SAMM50P1-201ENST00000455403 ZSCAN29Q8IWY8 852 aaPredicted RBP8.27□□□□□ -1.09
SAMM50P1-201ENST00000455403 NBPF20Q3BBV1 942 aa8.26□□□□□ -1.09
SAMM50P1-201ENST00000455403 CCDC102BQ68D86 513 aa8.26□□□□□ -1.09
SAMM50P1-201ENST00000455403 DZIP3Q86Y13 1208 aaKnown RBP8.26□□□□□ -1.09
SAMM50P1-201ENST00000455403 TPCN2Q8NHX9 752 aa8.26□□□□□ -1.09
SAMM50P1-201ENST00000455403 PURBQ96QR8 312 aaKnown RBP8.26□□□□□ -1.09
SAMM50P1-201ENST00000455403 TOR4AQ9NXH8 423 aa8.26□□□□□ -1.09
SAMM50P1-201ENST00000455403 DOLKQ9UPQ8 538 aa8.26□□□□□ -1.09
SAMM50P1-201ENST00000455403 TNFRSF10AO00220 468 aa8.25□□□□□ -1.09
SAMM50P1-201ENST00000455403 P4HBP07237 508 aaKnown RBP8.25□□□□□ -1.09
SAMM50P1-201ENST00000455403 MRPL58Q14197 206 aaKnown RBP8.25□□□□□ -1.09
SAMM50P1-201ENST00000455403 COL19A1Q14993 1142 aa8.25□□□□□ -1.09
SAMM50P1-201ENST00000455403 RGL4Q8IZJ4 473 aa8.25□□□□□ -1.09
SAMM50P1-201ENST00000455403 SNIP1Q8TAD8 396 aaKnown RBP8.25□□□□□ -1.09
SAMM50P1-201ENST00000455403 CHMP4AQ9BY43 222 aa8.25□□□□□ -1.09
SAMM50P1-201ENST00000455403 CFAP43Q8NDM7 1665 aa8.25□□□□□ -1.09
SAMM50P1-201ENST00000455403 RIMS1Q86UR5 1692 aaKnown RBP8.24□□□□□ -1.09
SAMM50P1-201ENST00000455403 ADH1CP00326 375 aa8.24□□□□□ -1.09
SAMM50P1-201ENST00000455403 CANXP27824 592 aaKnown RBP8.24□□□□□ -1.09
SAMM50P1-201ENST00000455403 FKBP4Q02790 459 aaKnown RBP eCLIP8.24□□□□□ -1.09
SAMM50P1-201ENST00000455403 ERICH6BQ5W0A0 696 aa8.24□□□□□ -1.09
SAMM50P1-201ENST00000455403 PLB1Q6P1J6 1458 aa8.24□□□□□ -1.09
SAMM50P1-201ENST00000455403 STRCQ7RTU9 1775 aa8.24□□□□□ -1.09
SAMM50P1-201ENST00000455403 ESPNB1AK53 854 aa8.23□□□□□ -1.09
SAMM50P1-201ENST00000455403 NEFLP07196 543 aa8.23□□□□□ -1.09
SAMM50P1-201ENST00000455403 FKBP5Q13451 457 aaPredicted RBP8.23□□□□□ -1.09
SAMM50P1-201ENST00000455403 LDLRAD1Q5T700 205 aa8.23□□□□□ -1.09
SAMM50P1-201ENST00000455403 POTEAQ6S8J7 498 aa8.23□□□□□ -1.09
SAMM50P1-201ENST00000455403 VASH1Q7L8A9 365 aaPredicted RBP8.23□□□□□ -1.09
SAMM50P1-201ENST00000455403 GAS2L2Q8NHY3 880 aa8.23□□□□□ -1.09
SAMM50P1-201ENST00000455403 GRIN2AQ12879 1464 aa8.23□□□□□ -1.09
SAMM50P1-201ENST00000455403 SETD1AO15047 1707 aaKnown RBP8.23□□□□□ -1.09
SAMM50P1-201ENST00000455403 FANCIQ9NVI1 1328 aa8.23□□□□□ -1.09
SAMM50P1-201ENST00000455403 PSME1Q06323 249 aa8.22□□□□□ -1.09
SAMM50P1-201ENST00000455403 RAD51AP2Q09MP3 1159 aa8.22□□□□□ -1.09
SAMM50P1-201ENST00000455403 SF3B2Q13435 895 aaKnown RBP8.22□□□□□ -1.09
SAMM50P1-201ENST00000455403 SEPT12Q8IYM1 358 aa8.22□□□□□ -1.09
SAMM50P1-201ENST00000455403 CYP4X1Q8N118 509 aa8.22□□□□□ -1.09
SAMM50P1-201ENST00000455403 KCTD15Q96SI1 283 aaPredicted RBP8.22□□□□□ -1.09
SAMM50P1-201ENST00000455403 HINFPQ9BQA5 517 aa8.22□□□□□ -1.09
SAMM50P1-201ENST00000455403 RBM19Q9Y4C8 960 aaKnown RBP8.22□□□□□ -1.09
SAMM50P1-201ENST00000455403 PCDHGA11Q9Y5H2 935 aa8.22□□□□□ -1.09
SAMM50P1-201ENST00000455403 BCORL1Q5H9F3 1711 aa8.22□□□□□ -1.09
SAMM50P1-201ENST00000455403 NUP160Q12769 1436 aa8.22□□□□□ -1.09
SAMM50P1-201ENST00000455403 ASXL2Q76L83 1435 aa8.22□□□□□ -1.09
SAMM50P1-201ENST00000455403 TNIKQ9UKE5 1360 aa8.22□□□□□ -1.09
SAMM50P1-201ENST00000455403 SCAMP3O14828 347 aaKnown RBP8.22□□□□□ -1.09
SAMM50P1-201ENST00000455403 ALDH1A1P00352 501 aa8.22□□□□□ -1.09
SAMM50P1-201ENST00000455403 FSHRP23945 695 aa8.22□□□□□ -1.09
SAMM50P1-201ENST00000455403 GRM5P41594 1212 aa8.22□□□□□ -1.09
SAMM50P1-201ENST00000455403 GIMAP6Q6P9H5 292 aa8.22□□□□□ -1.09
SAMM50P1-201ENST00000455403 PIK3R5Q8WYR1 880 aa8.22□□□□□ -1.09
SAMM50P1-201ENST00000455403 PDZRN3Q9UPQ7 1066 aa8.22□□□□□ -1.09
SAMM50P1-201ENST00000455403 EEA1Q15075 1411 aa8.21□□□□□ -1.09
SAMM50P1-201ENST00000455403 CEP162Q5TB80 1403 aa8.21□□□□□ -1.09
SAMM50P1-201ENST00000455403 KIAA0586Q9BVV6 1533 aa8.21□□□□□ -1.1
SAMM50P1-201ENST00000455403 MAP3K4Q9Y6R4 1608 aa8.21□□□□□ -1.1
SAMM50P1-201ENST00000455403 TTC24A2A3L6 582 aaPredicted RBP8.21□□□□□ -1.1
SAMM50P1-201ENST00000455403 WEE1P30291 646 aa8.21□□□□□ -1.1
SAMM50P1-201ENST00000455403 NR5A1Q13285 461 aa8.21□□□□□ -1.1
SAMM50P1-201ENST00000455403 ARID5BQ14865 1188 aa8.21□□□□□ -1.1
SAMM50P1-201ENST00000455403 INTS6LQ5JSJ4 861 aaKnown RBP8.21□□□□□ -1.1
SAMM50P1-201ENST00000455403 TMC7Q7Z402 723 aa8.21□□□□□ -1.1
SAMM50P1-201ENST00000455403 GIGYF1O75420 1035 aaPredicted RBP8.2□□□□□ -1.1
SAMM50P1-201ENST00000455403 SMPD1P17405 629 aa8.2□□□□□ -1.1
SAMM50P1-201ENST00000455403 NAA30Q147X3 362 aaPredicted RBP8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms