RNA–Protein interactions for RNA: ENST00000454289.7

TSFM-204, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TSFM, Length 2,192 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-204ENST00000454289 DDX54Q8TDD1 881 aaKnown RBP16.32■□□□□ 0.2
TSFM-204ENST00000454289 HMMRO75330 724 aa16.31■□□□□ 0.2
TSFM-204ENST00000454289 FMNL2Q96PY5 1086 aa16.31■□□□□ 0.2
TSFM-204ENST00000454289 LRRFIP2Q9Y608 721 aaKnown RBP16.31■□□□□ 0.2
TSFM-204ENST00000454289 ERVV-2B6SEH9 535 aa16.31■□□□□ 0.2
TSFM-204ENST00000454289 SNRPA1P09661 255 aaKnown RBP16.31■□□□□ 0.2
TSFM-204ENST00000454289 TOGARAM1Q9Y4F4 1720 aa16.3■□□□□ 0.2
TSFM-204ENST00000454289 UBTFL1P0CB47 393 aaPredicted RBP16.3■□□□□ 0.2
TSFM-204ENST00000454289 KSR2Q6VAB6 950 aa16.3■□□□□ 0.2
TSFM-204ENST00000454289 MAP3K2Q9Y2U5 619 aa16.3■□□□□ 0.2
TSFM-204ENST00000454289 PAPPAQ13219 1627 aa16.3■□□□□ 0.2
TSFM-204ENST00000454289 ATP8B2P98198 1209 aa16.3■□□□□ 0.2
TSFM-204ENST00000454289 USP16Q9Y5T5 823 aa16.3■□□□□ 0.2
TSFM-204ENST00000454289 DISP2A7MBM2 1401 aa16.3■□□□□ 0.2
TSFM-204ENST00000454289 UBR2Q8IWV8 1755 aa16.3■□□□□ 0.2
TSFM-204ENST00000454289 LAMB4A4D0S4 1761 aa16.29■□□□□ 0.2
TSFM-204ENST00000454289 PLCH1Q4KWH8 1693 aa16.29■□□□□ 0.2
TSFM-204ENST00000454289 PNMA6EA0A0J9YXQ4 647 aa16.28■□□□□ 0.2
TSFM-204ENST00000454289 AIMP1Q12904 312 aaKnown RBP16.28■□□□□ 0.2
TSFM-204ENST00000454289 APBB1O00213 710 aa16.27■□□□□ 0.2
TSFM-204ENST00000454289 SMARCA5O60264 1052 aaPredicted RBP16.27■□□□□ 0.2
TSFM-204ENST00000454289 NBPF7P0C2Y1 421 aaPredicted RBP16.27■□□□□ 0.2
TSFM-204ENST00000454289 MYL6BP14649 208 aa16.27■□□□□ 0.2
TSFM-204ENST00000454289 PIP4K2BP78356 416 aa16.27■□□□□ 0.2
TSFM-204ENST00000454289 BMP2KLQ5H9B9 411 aa16.27■□□□□ 0.2
TSFM-204ENST00000454289 PLEKHM2Q8IWE5 1019 aa16.27■□□□□ 0.2
TSFM-204ENST00000454289 C16orf71Q8IYS4 520 aaPredicted RBP16.27■□□□□ 0.2
TSFM-204ENST00000454289 NOP58Q9Y2X3 529 aaKnown RBP16.27■□□□□ 0.2
TSFM-204ENST00000454289 KCPQ6ZWJ8 1503 aa16.27■□□□□ 0.2
TSFM-204ENST00000454289 LRP10Q7Z4F1 713 aa16.27■□□□□ 0.19
TSFM-204ENST00000454289 WNK3Q9BYP7 1800 aa16.26■□□□□ 0.19
TSFM-204ENST00000454289 TOM1O60784 492 aa16.26■□□□□ 0.19
TSFM-204ENST00000454289 ALDH1L1O75891 902 aa16.26■□□□□ 0.19
TSFM-204ENST00000454289 DDX58O95786 925 aaKnown RBP16.26■□□□□ 0.19
TSFM-204ENST00000454289 XAGE3Q8WTP9 111 aa16.26■□□□□ 0.19
TSFM-204ENST00000454289 ADAMTS2O95450 1211 aa16.26■□□□□ 0.19
TSFM-204ENST00000454289 PIP4K2AP48426 406 aaPredicted RBP16.26■□□□□ 0.19
TSFM-204ENST00000454289 OTUD7AQ8TE49 926 aaPredicted RBP16.26■□□□□ 0.19
TSFM-204ENST00000454289 ZBTB47Q9UFB7 747 aaPredicted RBP16.26■□□□□ 0.19
TSFM-204ENST00000454289 EXOC6BQ9Y2D4 811 aa16.26■□□□□ 0.19
TSFM-204ENST00000454289 NRAPQ86VF7 1730 aa16.25■□□□□ 0.19
TSFM-204ENST00000454289 BCL11AQ9H165 835 aa16.25■□□□□ 0.19
TSFM-204ENST00000454289 TNS2Q63HR2 1409 aa16.25■□□□□ 0.19
TSFM-204ENST00000454289 CWF19L2Q2TBE0 894 aaKnown RBP16.24■□□□□ 0.19
TSFM-204ENST00000454289 COPS6Q7L5N1 327 aa16.24■□□□□ 0.19
TSFM-204ENST00000454289 SSH3Q8TE77 659 aa16.24■□□□□ 0.19
TSFM-204ENST00000454289 DDRGK1Q96HY6 314 aa16.24■□□□□ 0.19
TSFM-204ENST00000454289 PPP1R42Q7Z4L9 355 aa16.23■□□□□ 0.19
TSFM-204ENST00000454289 LINS1Q8NG48 757 aa16.23■□□□□ 0.19
TSFM-204ENST00000454289 GSPT1P15170 499 aaKnown RBP16.23■□□□□ 0.19
TSFM-204ENST00000454289 POLA2Q14181 598 aa16.23■□□□□ 0.19
TSFM-204ENST00000454289 RIC3Q7Z5B4 369 aa16.23■□□□□ 0.19
TSFM-204ENST00000454289 IBTKQ9P2D0 1353 aaPredicted RBP16.23■□□□□ 0.19
TSFM-204ENST00000454289 ITGB4P16144 1822 aa16.22■□□□□ 0.19
TSFM-204ENST00000454289 TMOD3Q9NYL9 352 aa16.22■□□□□ 0.19
TSFM-204ENST00000454289 NUTM2BA6NNL0 878 aaPredicted RBP16.21■□□□□ 0.19
TSFM-204ENST00000454289 NUTM2EB1AL46 878 aaPredicted RBP16.21■□□□□ 0.19
TSFM-204ENST00000454289 IGKV5-2P06315 115 aa16.21■□□□□ 0.19
TSFM-204ENST00000454289 NUTM2AQ8IVF1 878 aaPredicted RBP16.21■□□□□ 0.19
TSFM-204ENST00000454289 TBC1D32Q96NH3 1257 aa16.21■□□□□ 0.19
TSFM-204ENST00000454289 C9orf78Q9NZ63 289 aaPredicted RBP16.21■□□□□ 0.19
TSFM-204ENST00000454289 NBPF26B4DH59 902 aa16.21■□□□□ 0.19
TSFM-204ENST00000454289 PTCD1O75127 700 aaKnown RBP16.21■□□□□ 0.19
TSFM-204ENST00000454289 TTC22Q5TAA0 569 aa16.21■□□□□ 0.19
TSFM-204ENST00000454289 NBPF14Q5TI25 921 aa16.21■□□□□ 0.19
TSFM-204ENST00000454289 NBPF10Q6P3W6 841 aaKnown RBP16.21■□□□□ 0.19
TSFM-204ENST00000454289 NBPF15Q8N660 670 aa16.21■□□□□ 0.19
TSFM-204ENST00000454289 UPF2Q9HAU5 1272 aaKnown RBP16.21■□□□□ 0.19
TSFM-204ENST00000454289 ARFGEF2Q9Y6D5 1785 aa16.2■□□□□ 0.18
TSFM-204ENST00000454289 PIGBQ92521 554 aa16.2■□□□□ 0.18
TSFM-204ENST00000454289 METTL22Q9BUU2 404 aaPredicted RBP16.2■□□□□ 0.18
TSFM-204ENST00000454289 ERBB4Q15303 1308 aa16.2■□□□□ 0.18
TSFM-204ENST00000454289 UBAP1LF5GYI3 381 aa16.2■□□□□ 0.18
TSFM-204ENST00000454289 MFAP1P55081 439 aaKnown RBP16.2■□□□□ 0.18
TSFM-204ENST00000454289 ANKRD13DQ6ZTN6 518 aa16.2■□□□□ 0.18
TSFM-204ENST00000454289 LRRCC1Q9C099 1032 aa16.2■□□□□ 0.18
TSFM-204ENST00000454289 UTYO14607 1347 aa16.19■□□□□ 0.18
TSFM-204ENST00000454289 GRM8O00222 908 aa16.19■□□□□ 0.18
TSFM-204ENST00000454289 SRGAP3O43295 1099 aa16.19■□□□□ 0.18
TSFM-204ENST00000454289 MYD88Q99836 296 aa16.19■□□□□ 0.18
TSFM-204ENST00000454289 LRP6O75581 1613 aa16.19■□□□□ 0.18
TSFM-204ENST00000454289 SPATA31A1Q5TZJ5 1347 aa16.19■□□□□ 0.18
TSFM-204ENST00000454289 NEURL1BA8MQ27 555 aa16.19■□□□□ 0.18
TSFM-204ENST00000454289 EXOC5O00471 708 aa16.19■□□□□ 0.18
TSFM-204ENST00000454289 A1BGP04217 495 aa16.18■□□□□ 0.18
TSFM-204ENST00000454289 NEXNQ0ZGT2 675 aa16.18■□□□□ 0.18
TSFM-204ENST00000454289 MTX1Q13505 466 aa16.18■□□□□ 0.18
TSFM-204ENST00000454289 ASAP1Q9ULH1 1129 aa16.18■□□□□ 0.18
TSFM-204ENST00000454289 NWD2Q9ULI1 1742 aa16.18■□□□□ 0.18
TSFM-204ENST00000454289 SALL3Q9BXA9 1300 aa16.18■□□□□ 0.18
TSFM-204ENST00000454289 TBC1D9Q6ZT07 1266 aa16.17■□□□□ 0.18
TSFM-204ENST00000454289 SUCLG2Q96I99 432 aa16.17■□□□□ 0.18
TSFM-204ENST00000454289 AFDNP55196 1824 aaKnown RBP16.17■□□□□ 0.18
TSFM-204ENST00000454289 SLIT2O94813 1529 aa16.17■□□□□ 0.18
TSFM-204ENST00000454289 SURF6O75683 361 aaKnown RBP16.17■□□□□ 0.18
TSFM-204ENST00000454289 KAZALD1Q96I82 304 aa16.17■□□□□ 0.18
TSFM-204ENST00000454289 ATG3Q9NT62 314 aa16.17■□□□□ 0.18
TSFM-204ENST00000454289 KAT6BQ8WYB5 2073 aa16.17■□□□□ 0.18
TSFM-204ENST00000454289 PDE1AP54750 535 aa16.16■□□□□ 0.18
TSFM-204ENST00000454289 GCKRQ14397 625 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms