RNA–Protein interactions for RNA: ENST00000453689.5

VPS16-205, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS16, Length 966 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-205ENST00000453689 ARXQ96QS3 562 aa19.28■□□□□ 0.68
VPS16-205ENST00000453689 POLD1P28340 1107 aa19.27■□□□□ 0.68
VPS16-205ENST00000453689 NEUROD2Q15784 382 aa19.27■□□□□ 0.68
VPS16-205ENST00000453689 ARHGEF1Q92888 912 aaKnown RBP19.27■□□□□ 0.68
VPS16-205ENST00000453689 LMOD3Q0VAK6 560 aa19.26■□□□□ 0.67
VPS16-205ENST00000453689 MIS18AQ9NYP9 233 aa19.26■□□□□ 0.67
VPS16-205ENST00000453689 SOS1Q07889 1333 aaPredicted RBP19.25■□□□□ 0.67
VPS16-205ENST00000453689 TEX13AQ9BXU3 409 aaPredicted RBP19.25■□□□□ 0.67
VPS16-205ENST00000453689 ZBTB1Q9Y2K1 713 aa19.25■□□□□ 0.67
VPS16-205ENST00000453689 KIF13BQ9NQT8 1826 aa19.25■□□□□ 0.67
VPS16-205ENST00000453689 BCORQ6W2J9 1755 aa19.24■□□□□ 0.67
VPS16-205ENST00000453689 SCN7AQ01118 1682 aa19.24■□□□□ 0.67
VPS16-205ENST00000453689 STARD3NLO95772 234 aa19.24■□□□□ 0.67
VPS16-205ENST00000453689 RFC4P35249 363 aa19.24■□□□□ 0.67
VPS16-205ENST00000453689 FHDC1Q9C0D6 1143 aaPredicted RBP19.24■□□□□ 0.67
VPS16-205ENST00000453689 TRIM35Q9UPQ4 493 aa19.24■□□□□ 0.67
VPS16-205ENST00000453689 AFDNP55196 1824 aaKnown RBP19.23■□□□□ 0.67
VPS16-205ENST00000453689 COL15A1P39059 1388 aa19.23■□□□□ 0.67
VPS16-205ENST00000453689 PRAMEF22A3QJZ6 481 aa19.22■□□□□ 0.67
VPS16-205ENST00000453689 FAM9BQ8IZU0 186 aa19.22■□□□□ 0.67
VPS16-205ENST00000453689 USP16Q9Y5T5 823 aa19.22■□□□□ 0.67
VPS16-205ENST00000453689 APAF1O14727 1248 aa19.21■□□□□ 0.67
VPS16-205ENST00000453689 SNRPA1P09661 255 aaKnown RBP19.21■□□□□ 0.67
VPS16-205ENST00000453689 GYS1P13807 737 aa19.21■□□□□ 0.67
VPS16-205ENST00000453689 CANXP27824 592 aaKnown RBP19.21■□□□□ 0.67
VPS16-205ENST00000453689 SYT17Q9BSW7 474 aa19.21■□□□□ 0.67
VPS16-205ENST00000453689 SRP68Q9UHB9 627 aaKnown RBP19.21■□□□□ 0.67
VPS16-205ENST00000453689 USP42Q9H9J4 1324 aaKnown RBP19.21■□□□□ 0.67
VPS16-205ENST00000453689 A1BGP04217 495 aa19.2■□□□□ 0.66
VPS16-205ENST00000453689 EIF4A1P60842 406 aaKnown RBP19.19■□□□□ 0.66
VPS16-205ENST00000453689 KLHL34Q8N239 644 aa19.19■□□□□ 0.66
VPS16-205ENST00000453689 TSPYL4Q9UJ04 414 aa19.19■□□□□ 0.66
VPS16-205ENST00000453689 KIAA1551Q9HCM1 1747 aa19.18■□□□□ 0.66
VPS16-205ENST00000453689 EIF5P55010 431 aaKnown RBP19.18■□□□□ 0.66
VPS16-205ENST00000453689 NLGN1Q8N2Q7 840 aa19.18■□□□□ 0.66
VPS16-205ENST00000453689 BABAM1Q9NWV8 329 aa19.18■□□□□ 0.66
VPS16-205ENST00000453689 N4BP2Q86UW6 1770 aaPredicted RBP19.18■□□□□ 0.66
VPS16-205ENST00000453689 MMP10P09238 476 aa19.17■□□□□ 0.66
VPS16-205ENST00000453689 NRXN2Q9P2S2 1712 aa19.17■□□□□ 0.66
VPS16-205ENST00000453689 NUP98P52948 1817 aa19.16■□□□□ 0.66
VPS16-205ENST00000453689 ZPR1O75312 459 aa19.16■□□□□ 0.66
VPS16-205ENST00000453689 GIGYF1O75420 1035 aaPredicted RBP19.16■□□□□ 0.66
VPS16-205ENST00000453689 IL6STP40189 918 aaPredicted RBP19.16■□□□□ 0.66
VPS16-205ENST00000453689 FKBP8Q14318 412 aa19.16■□□□□ 0.66
VPS16-205ENST00000453689 USPL1Q5W0Q7 1092 aa19.16■□□□□ 0.66
VPS16-205ENST00000453689 NARFQ9UHQ1 456 aa19.16■□□□□ 0.66
VPS16-205ENST00000453689 PIP4K2AP48426 406 aaPredicted RBP19.15■□□□□ 0.66
VPS16-205ENST00000453689 ZNF330Q9Y3S2 320 aaPredicted RBP19.15■□□□□ 0.66
VPS16-205ENST00000453689 BRCA1P38398 1863 aaKnown RBP19.14■□□□□ 0.65
VPS16-205ENST00000453689 CHL1O00533 1208 aa19.14■□□□□ 0.65
VPS16-205ENST00000453689 NLGN2Q8NFZ4 835 aa19.14■□□□□ 0.65
VPS16-205ENST00000453689 LAS1LQ9Y4W2 734 aaKnown RBP19.14■□□□□ 0.65
VPS16-205ENST00000453689 CHD4Q14839 1912 aa19.13■□□□□ 0.65
VPS16-205ENST00000453689 A0A087WZG4 1122 aa19.13■□□□□ 0.65
VPS16-205ENST00000453689 BCL2L12Q9HB09 334 aa19.13■□□□□ 0.65
VPS16-205ENST00000453689 SENP3-EIF4A1A0A087X0R7 540 aa19.12■□□□□ 0.65
VPS16-205ENST00000453689 NBPF26B4DH59 902 aa19.12■□□□□ 0.65
VPS16-205ENST00000453689 NBPF10Q6P3W6 841 aaKnown RBP19.12■□□□□ 0.65
VPS16-205ENST00000453689 NBPF15Q8N660 670 aa19.12■□□□□ 0.65
VPS16-205ENST00000453689 TM4SF1P30408 202 aa19.11■□□□□ 0.65
VPS16-205ENST00000453689 TBC1D2BQ9UPU7 963 aa19.11■□□□□ 0.65
VPS16-205ENST00000453689 CD2APQ9Y5K6 639 aa19.11■□□□□ 0.65
VPS16-205ENST00000453689 PARP3Q9Y6F1 533 aa19.11■□□□□ 0.65
VPS16-205ENST00000453689 DDR1Q08345 913 aa19.1■□□□□ 0.65
VPS16-205ENST00000453689 NPM2Q86SE8 214 aaKnown RBP19.1■□□□□ 0.65
VPS16-205ENST00000453689 CFAP44Q96MT7 982 aa19.1■□□□□ 0.65
VPS16-205ENST00000453689 ANKRD31Q8N7Z5 1873 aa19.09■□□□□ 0.65
VPS16-205ENST00000453689 C10orf71Q711Q0 1435 aa19.09■□□□□ 0.65
VPS16-205ENST00000453689 DZIP3Q86Y13 1208 aaKnown RBP19.09■□□□□ 0.65
VPS16-205ENST00000453689 DLEC1Q9Y238 1755 aa19.09■□□□□ 0.65
VPS16-205ENST00000453689 POLRMTO00411 1230 aaKnown RBP19.08■□□□□ 0.64
VPS16-205ENST00000453689 CAMTA2O94983 1202 aa19.08■□□□□ 0.64
VPS16-205ENST00000453689 ZNF853P0CG23 659 aa19.08■□□□□ 0.64
VPS16-205ENST00000453689 CALD1Q05682 793 aaKnown RBP19.08■□□□□ 0.64
VPS16-205ENST00000453689 NFIXQ14938 502 aa19.08■□□□□ 0.64
VPS16-205ENST00000453689 CCDC27Q2M243 656 aa19.08■□□□□ 0.64
VPS16-205ENST00000453689 KRT24Q2M2I5 525 aa19.08■□□□□ 0.64
VPS16-205ENST00000453689 MBIPQ9NS73 344 aa19.08■□□□□ 0.64
VPS16-205ENST00000453689 ANKRD36CQ5JPF3 1778 aa19.08■□□□□ 0.64
VPS16-205ENST00000453689 NCBP3Q53F19 620 aaKnown RBP19.07■□□□□ 0.64
VPS16-205ENST00000453689 IFT57Q9NWB7 429 aa19.07■□□□□ 0.64
VPS16-205ENST00000453689 ERBB4Q15303 1308 aa19.06■□□□□ 0.64
VPS16-205ENST00000453689 DCAF8L1A6NGE4 600 aa19.06■□□□□ 0.64
VPS16-205ENST00000453689 GNAI1P63096 354 aa19.06■□□□□ 0.64
VPS16-205ENST00000453689 WWC1Q8IX03 1113 aa19.06■□□□□ 0.64
VPS16-205ENST00000453689 ARFGEF1Q9Y6D6 1849 aa19.05■□□□□ 0.64
VPS16-205ENST00000453689 PXDNLA1KZ92 1463 aa19.05■□□□□ 0.64
VPS16-205ENST00000453689 MYL6BP14649 208 aa19.05■□□□□ 0.64
VPS16-205ENST00000453689 EIF2S2P20042 333 aaKnown RBP19.05■□□□□ 0.64
VPS16-205ENST00000453689 TBC1D9BQ66K14 1250 aa19.05■□□□□ 0.64
VPS16-205ENST00000453689 NGEFQ8N5V2 710 aa19.05■□□□□ 0.64
VPS16-205ENST00000453689 CACNA1SQ13698 1873 aa19.05■□□□□ 0.64
VPS16-205ENST00000453689 BICDL1Q6ZP65 573 aa19.04■□□□□ 0.64
VPS16-205ENST00000453689 CACNA1FO60840 1977 aa19.03■□□□□ 0.64
VPS16-205ENST00000453689 SALL2Q9Y467 1007 aaPredicted RBP19.03■□□□□ 0.64
VPS16-205ENST00000453689 COL11A2P13942 1736 aaPredicted RBP19.03■□□□□ 0.64
VPS16-205ENST00000453689 SERPINB2P05120 415 aa19.02■□□□□ 0.64
VPS16-205ENST00000453689 PDIA6Q15084 440 aa19.02■□□□□ 0.64
VPS16-205ENST00000453689 GPR162Q16538 588 aa19.02■□□□□ 0.64
VPS16-205ENST00000453689 NECTIN2Q92692 538 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms