RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 RILPL2Q969X0 211 aa14.53□□□□□ -0.08
VTA1-203ENST00000452973 ZNF496Q96IT1 587 aaPredicted RBP14.53□□□□□ -0.08
VTA1-203ENST00000452973 FOXD4L1Q9NU39 408 aa14.53□□□□□ -0.08
VTA1-203ENST00000452973 NUTM1Q86Y26 1132 aa14.52□□□□□ -0.08
VTA1-203ENST00000452973 NCOA3Q9Y6Q9 1424 aa14.52□□□□□ -0.09
VTA1-203ENST00000452973 CASC1Q6TDU7 716 aa14.52□□□□□ -0.09
VTA1-203ENST00000452973 CABP4P57796 275 aa14.51□□□□□ -0.09
VTA1-203ENST00000452973 KDM6AO15550 1401 aaPredicted RBP14.51□□□□□ -0.09
VTA1-203ENST00000452973 CACNA1FO60840 1977 aa14.51□□□□□ -0.09
VTA1-203ENST00000452973 MX1P20591 662 aa14.51□□□□□ -0.09
VTA1-203ENST00000452973 OS9Q13438 667 aaPredicted RBP14.51□□□□□ -0.09
VTA1-203ENST00000452973 KSR2Q6VAB6 950 aa14.51□□□□□ -0.09
VTA1-203ENST00000452973 KDM3BQ7LBC6 1761 aa14.51□□□□□ -0.09
VTA1-203ENST00000452973 RIC3Q7Z5B4 369 aa14.5□□□□□ -0.09
VTA1-203ENST00000452973 DDX54Q8TDD1 881 aaKnown RBP14.5□□□□□ -0.09
VTA1-203ENST00000452973 KIF2CQ99661 725 aa14.5□□□□□ -0.09
VTA1-203ENST00000452973 HYPKQ9NX55 129 aa14.5□□□□□ -0.09
VTA1-203ENST00000452973 USP16Q9Y5T5 823 aa14.5□□□□□ -0.09
VTA1-203ENST00000452973 HSP90AA1P07900 732 aaKnown RBP14.5□□□□□ -0.09
VTA1-203ENST00000452973 HSP90AB1P08238 724 aaKnown RBP14.5□□□□□ -0.09
VTA1-203ENST00000452973 IBTKQ9P2D0 1353 aaPredicted RBP14.5□□□□□ -0.09
VTA1-203ENST00000452973 LMTK3Q96Q04 1460 aa14.5□□□□□ -0.09
VTA1-203ENST00000452973 CD2BP2O95400 341 aaKnown RBP14.5□□□□□ -0.09
VTA1-203ENST00000452973 MAP4K4O95819 1239 aaPredicted RBP14.5□□□□□ -0.09
VTA1-203ENST00000452973 SSH3Q8TE77 659 aa14.5□□□□□ -0.09
VTA1-203ENST00000452973 DCAF5Q96JK2 942 aa14.5□□□□□ -0.09
VTA1-203ENST00000452973 ANTXR1Q9H6X2 564 aa14.5□□□□□ -0.09
VTA1-203ENST00000452973 EVA1CP58658 441 aa14.49□□□□□ -0.09
VTA1-203ENST00000452973 DDX21Q9NR30 783 aaKnown RBP eCLIP14.49□□□□□ -0.09
VTA1-203ENST00000452973 DDX58O95786 925 aaKnown RBP14.48□□□□□ -0.09
VTA1-203ENST00000452973 COPS6Q7L5N1 327 aa14.48□□□□□ -0.09
VTA1-203ENST00000452973 XAGE3Q8WTP9 111 aa14.48□□□□□ -0.09
VTA1-203ENST00000452973 PDIA6Q15084 440 aa14.48□□□□□ -0.09
VTA1-203ENST00000452973 JARID2Q92833 1246 aaPredicted RBP14.48□□□□□ -0.09
VTA1-203ENST00000452973 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.48□□□□□ -0.091e-6■□□□□ 10.8
VTA1-203ENST00000452973 PXDNLA1KZ92 1463 aa14.48□□□□□ -0.09
VTA1-203ENST00000452973 HEG1Q9ULI3 1381 aa14.47□□□□□ -0.09
VTA1-203ENST00000452973 RHPN1Q8TCX5 695 aa14.47□□□□□ -0.09
VTA1-203ENST00000452973 PA2G4Q9UQ80 394 aaKnown RBP14.47□□□□□ -0.09
VTA1-203ENST00000452973 ZCRB1Q8TBF4 217 aaKnown RBP14.46□□□□□ -0.09
VTA1-203ENST00000452973 USP26Q9BXU7 913 aa14.46□□□□□ -0.09
VTA1-203ENST00000452973 OVOS2A0A0G2JMS6 1433 aa14.46□□□□□ -0.09
VTA1-203ENST00000452973 LARP1Q6PKG0 1096 aaKnown RBP14.46□□□□□ -0.09
VTA1-203ENST00000452973 UNC5CLQ8IV45 518 aa14.46□□□□□ -0.09
VTA1-203ENST00000452973 OSBPL3Q9H4L5 887 aa14.46□□□□□ -0.09
VTA1-203ENST00000452973 XIRP1Q702N8 1843 aaKnown RBP14.46□□□□□ -0.1
VTA1-203ENST00000452973 PTCD1O75127 700 aaKnown RBP14.46□□□□□ -0.1
VTA1-203ENST00000452973 SNRPA1P09661 255 aaKnown RBP14.46□□□□□ -0.1
VTA1-203ENST00000452973 MYD88Q99836 296 aa14.46□□□□□ -0.1
VTA1-203ENST00000452973 SOS2Q07890 1332 aaPredicted RBP14.46□□□□□ -0.1
VTA1-203ENST00000452973 WDR17Q8IZU2 1322 aa14.46□□□□□ -0.1
VTA1-203ENST00000452973 POLA2Q14181 598 aa14.45□□□□□ -0.1
VTA1-203ENST00000452973 LINS1Q8NG48 757 aa14.45□□□□□ -0.1
VTA1-203ENST00000452973 FMNL2Q96PY5 1086 aa14.45□□□□□ -0.1
VTA1-203ENST00000452973 CAMTA1Q9Y6Y1 1673 aa14.45□□□□□ -0.1
VTA1-203ENST00000452973 CPDO75976 1380 aa14.45□□□□□ -0.1
VTA1-203ENST00000452973 COL18A1P39060 1754 aa14.45□□□□□ -0.1
VTA1-203ENST00000452973 STRCQ7RTU9 1775 aa14.45□□□□□ -0.1
VTA1-203ENST00000452973 GRM8O00222 908 aa14.44□□□□□ -0.1
VTA1-203ENST00000452973 ERC2O15083 957 aa14.44□□□□□ -0.1
VTA1-203ENST00000452973 ALDH1L1O75891 902 aa14.44□□□□□ -0.1
VTA1-203ENST00000452973 NEXNQ0ZGT2 675 aa14.44□□□□□ -0.1
VTA1-203ENST00000452973 REC8O95072 547 aa14.44□□□□□ -0.1
VTA1-203ENST00000452973 KIF1BPQ96EK5 621 aa14.44□□□□□ -0.1
VTA1-203ENST00000452973 SUCLG2Q96I99 432 aa14.44□□□□□ -0.1
VTA1-203ENST00000452973 SALL3Q9BXA9 1300 aa14.44□□□□□ -0.1
VTA1-203ENST00000452973 RAB11FIP3O75154 756 aa14.44□□□□□ -0.1
VTA1-203ENST00000452973 SIL1Q9H173 461 aa14.44□□□□□ -0.1
VTA1-203ENST00000452973 BICC1Q9H694 974 aaKnown RBP14.44□□□□□ -0.1
VTA1-203ENST00000452973 ATP5J2-PTCD1G3V325 749 aa14.43□□□□□ -0.1
VTA1-203ENST00000452973 IGKV5-2P06315 115 aa14.43□□□□□ -0.1
VTA1-203ENST00000452973 ANKRD13DQ6ZTN6 518 aa14.43□□□□□ -0.1
VTA1-203ENST00000452973 SNX21Q969T3 373 aa14.43□□□□□ -0.1
VTA1-203ENST00000452973 ANO2Q9NQ90 1003 aa14.43□□□□□ -0.1
VTA1-203ENST00000452973 CHMP5Q9NZZ3 219 aa14.43□□□□□ -0.1
VTA1-203ENST00000452973 IL2RBP14784 551 aa14.42□□□□□ -0.1
VTA1-203ENST00000452973 KLHDC4Q8TBB5 520 aa14.42□□□□□ -0.1
VTA1-203ENST00000452973 K7ELQ4 463 aaPredicted RBP14.42□□□□□ -0.1
VTA1-203ENST00000452973 ZNF330Q9Y3S2 320 aaPredicted RBP14.42□□□□□ -0.1
VTA1-203ENST00000452973 PCDH11XQ9BZA7 1347 aa14.41□□□□□ -0.1
VTA1-203ENST00000452973 PCDH11YQ9BZA8 1340 aa14.41□□□□□ -0.1
VTA1-203ENST00000452973 GSE1Q14687 1217 aa14.41□□□□□ -0.1
VTA1-203ENST00000452973 STAP2Q9UGK3 403 aa14.41□□□□□ -0.1
VTA1-203ENST00000452973 NEURL1BA8MQ27 555 aa14.4□□□□□ -0.1
VTA1-203ENST00000452973 CHMLP26374 656 aa14.4□□□□□ -0.1
VTA1-203ENST00000452973 CLASRPQ8N2M8 674 aaKnown RBP14.4□□□□□ -0.1
VTA1-203ENST00000452973 KAZALD1Q96I82 304 aa14.4□□□□□ -0.1
VTA1-203ENST00000452973 ESYT1Q9BSJ8 1104 aa14.4□□□□□ -0.1
VTA1-203ENST00000452973 SCN11AQ9UI33 1791 aa14.4□□□□□ -0.1
VTA1-203ENST00000452973 EIF5BO60841 1220 aaKnown RBP14.4□□□□□ -0.1
VTA1-203ENST00000452973 HSP90AB4PQ58FF6 505 aa14.4□□□□□ -0.1
VTA1-203ENST00000452973 BTG4Q9NY30 223 aa14.4□□□□□ -0.1
VTA1-203ENST00000452973 SIPA1L3O60292 1781 aaPredicted RBP14.4□□□□□ -0.1
VTA1-203ENST00000452973 RABEP1Q15276 862 aa14.4□□□□□ -0.1
VTA1-203ENST00000452973 GCKRQ14397 625 aa14.39□□□□□ -0.11
VTA1-203ENST00000452973 UBE3BQ7Z3V4 1068 aa14.39□□□□□ -0.11
VTA1-203ENST00000452973 ARXQ96QS3 562 aa14.39□□□□□ -0.11
VTA1-203ENST00000452973 METTL22Q9BUU2 404 aaPredicted RBP14.39□□□□□ -0.11
VTA1-203ENST00000452973 A1BGP04217 495 aa14.39□□□□□ -0.11
VTA1-203ENST00000452973 CARD10Q9BWT7 1032 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms