RNA–Protein interactions for RNA: ENST00000452950.1

CSTF1-204, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 3

Gene CSTF1, Length 1,233 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-204ENST00000452950 NPR3P17342 541 aa9.51□□□□□ -0.89
CSTF1-204ENST00000452950 LINC01559Q495D7 138 aa9.51□□□□□ -0.89
CSTF1-204ENST00000452950 LDLRAD1Q5T700 205 aa9.51□□□□□ -0.89
CSTF1-204ENST00000452950 NOP9Q86U38 636 aaKnown RBP9.51□□□□□ -0.89
CSTF1-204ENST00000452950 C11orf95C9JLR9 678 aaPredicted RBP9.5□□□□□ -0.89
CSTF1-204ENST00000452950 GIGYF1O75420 1035 aaPredicted RBP9.5□□□□□ -0.89
CSTF1-204ENST00000452950 USP4Q13107 963 aa9.5□□□□□ -0.89
CSTF1-204ENST00000452950 NAA30Q147X3 362 aaPredicted RBP9.5□□□□□ -0.89
CSTF1-204ENST00000452950 CYB5RLQ6IPT4 315 aa9.5□□□□□ -0.89
CSTF1-204ENST00000452950 METTL16Q86W50 562 aaKnown RBP9.5□□□□□ -0.89
CSTF1-204ENST00000452950 PURBQ96QR8 312 aaKnown RBP9.5□□□□□ -0.89
CSTF1-204ENST00000452950 DNAJC2Q99543 621 aaKnown RBP9.5□□□□□ -0.89
CSTF1-204ENST00000452950 TINF2Q9BSI4 451 aa9.5□□□□□ -0.89
CSTF1-204ENST00000452950 BRPF3Q9ULD4 1205 aa9.5□□□□□ -0.89
CSTF1-204ENST00000452950 PRPF40AO75400 957 aaKnown RBP9.49□□□□□ -0.89
CSTF1-204ENST00000452950 LDHBP07195 334 aaKnown RBP9.49□□□□□ -0.89
CSTF1-204ENST00000452950 SH3BP5LQ7L8J4 393 aa9.49□□□□□ -0.89
CSTF1-204ENST00000452950 TMC1Q8TDI8 760 aa9.49□□□□□ -0.89
CSTF1-204ENST00000452950 CARD14Q9BXL6 1004 aa9.49□□□□□ -0.89
CSTF1-204ENST00000452950 TGIF2Q9GZN2 237 aa9.49□□□□□ -0.89
CSTF1-204ENST00000452950 CCSER2Q9H7U1 834 aa9.49□□□□□ -0.89
CSTF1-204ENST00000452950 ATP13A2Q9NQ11 1180 aa9.49□□□□□ -0.89
CSTF1-204ENST00000452950 METTL5Q9NRN9 209 aaKnown RBP9.49□□□□□ -0.89
CSTF1-204ENST00000452950 CUEDC1Q9NWM3 386 aaPredicted RBP9.49□□□□□ -0.89
CSTF1-204ENST00000452950 PRKAG2Q9UGJ0 569 aa9.49□□□□□ -0.89
CSTF1-204ENST00000452950 PARP2Q9UGN5 583 aa9.49□□□□□ -0.89
CSTF1-204ENST00000452950 ZNF511Q8NB15 262 aa9.48□□□□□ -0.89
CSTF1-204ENST00000452950 SLC43A3Q8NBI5 491 aa9.48□□□□□ -0.89
CSTF1-204ENST00000452950 RNF34Q969K3 372 aa9.48□□□□□ -0.89
CSTF1-204ENST00000452950 FAM161BQ96MY7 647 aa9.48□□□□□ -0.89
CSTF1-204ENST00000452950 CITED4Q96RK1 184 aa9.48□□□□□ -0.89
CSTF1-204ENST00000452950 LNPKQ9C0E8 428 aa9.48□□□□□ -0.89
CSTF1-204ENST00000452950 FOXO3O43524 673 aa9.47□□□□□ -0.89
CSTF1-204ENST00000452950 SORBS3O60504 671 aa9.47□□□□□ -0.89
CSTF1-204ENST00000452950 ATP2B1P20020 1258 aa9.47□□□□□ -0.89
CSTF1-204ENST00000452950 MPSTP25325 297 aa9.47□□□□□ -0.89
CSTF1-204ENST00000452950 MAPK8P45983 427 aa9.47□□□□□ -0.89
CSTF1-204ENST00000452950 TMC4Q7Z404 712 aa9.47□□□□□ -0.89
CSTF1-204ENST00000452950 DUSP9Q99956 384 aaKnown RBP9.47□□□□□ -0.89
CSTF1-204ENST00000452950 CAPN10Q9HC96 672 aa9.47□□□□□ -0.89
CSTF1-204ENST00000452950 NLRP2Q9NX02 1062 aa9.47□□□□□ -0.89
CSTF1-204ENST00000452950 VTI1BQ9UEU0 232 aa9.47□□□□□ -0.89
CSTF1-204ENST00000452950 TMA7Q9Y2S6 64 aaKnown RBP9.47□□□□□ -0.89
CSTF1-204ENST00000452950 MAGEB6P1A0A0J9YX57 407 aa9.46□□□□□ -0.9
CSTF1-204ENST00000452950 IGFBP4P22692 258 aa9.46□□□□□ -0.9
CSTF1-204ENST00000452950 FANCCQ00597 558 aa9.46□□□□□ -0.9
CSTF1-204ENST00000452950 NBPF20Q3BBV1 942 aa9.46□□□□□ -0.9
CSTF1-204ENST00000452950 DMRTB1Q96MA1 342 aa9.46□□□□□ -0.9
CSTF1-204ENST00000452950 PCDHB11Q9Y5F2 797 aa9.46□□□□□ -0.9
CSTF1-204ENST00000452950 WASF2Q9Y6W5 498 aa9.46□□□□□ -0.9
CSTF1-204ENST00000452950 PLCB3Q01970 1234 aa9.45□□□□□ -0.9
CSTF1-204ENST00000452950 PSMD2Q13200 908 aa9.45□□□□□ -0.9
CSTF1-204ENST00000452950 GNL2Q13823 731 aaKnown RBP9.45□□□□□ -0.9
CSTF1-204ENST00000452950 DSC3Q14574 896 aa9.45□□□□□ -0.9
CSTF1-204ENST00000452950 DHX38Q92620 1227 aaKnown RBP9.45□□□□□ -0.9
CSTF1-204ENST00000452950 ZCCHC6Q5VYS8 1495 aaKnown RBP9.45□□□□□ -0.9
CSTF1-204ENST00000452950 WDR62O43379 1518 aa9.45□□□□□ -0.9
CSTF1-204ENST00000452950 HMGXB3Q12766 1538 aa9.45□□□□□ -0.9
CSTF1-204ENST00000452950 VARSP26640 1264 aaKnown RBP9.44□□□□□ -0.9
CSTF1-204ENST00000452950 GTF2F1P35269 517 aaKnown RBP eCLIP9.44□□□□□ -0.9
CSTF1-204ENST00000452950 ZNF76P36508 570 aa9.44□□□□□ -0.9
CSTF1-204ENST00000452950 DAB2P98082 770 aa9.44□□□□□ -0.9
CSTF1-204ENST00000452950 ATP2B2Q01814 1243 aa9.44□□□□□ -0.9
CSTF1-204ENST00000452950 EHHADHQ08426 723 aa9.44□□□□□ -0.9
CSTF1-204ENST00000452950 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.44□□□□□ -0.9
CSTF1-204ENST00000452950 ARMC5Q96C12 935 aa9.44□□□□□ -0.9
CSTF1-204ENST00000452950 PDS5BQ9NTI5 1447 aa9.44□□□□□ -0.9
CSTF1-204ENST00000452950 ATAD2BQ9ULI0 1458 aa9.44□□□□□ -0.9
CSTF1-204ENST00000452950 SNRPBP14678 240 aaKnown RBP9.43□□□□□ -0.9
CSTF1-204ENST00000452950 TREML4Q6UXN2 200 aa9.43□□□□□ -0.9
CSTF1-204ENST00000452950 SH3RF1Q7Z6J0 888 aa9.43□□□□□ -0.9
CSTF1-204ENST00000452950 GAS2L2Q8NHY3 880 aa9.43□□□□□ -0.9
CSTF1-204ENST00000452950 VTI1AQ96AJ9 217 aa9.43□□□□□ -0.9
CSTF1-204ENST00000452950 SLC10A4Q96EP9 437 aa9.43□□□□□ -0.9
CSTF1-204ENST00000452950 MRC2Q9UBG0 1479 aa9.42□□□□□ -0.9
CSTF1-204ENST00000452950 AAMPQ13685 434 aa9.42□□□□□ -0.9
CSTF1-204ENST00000452950 ERFEQ4G0M1 354 aa9.42□□□□□ -0.9
CSTF1-204ENST00000452950 ALKBH2Q6NS38 261 aa9.42□□□□□ -0.9
CSTF1-204ENST00000452950 SENP2Q9HC62 589 aa9.42□□□□□ -0.9
CSTF1-204ENST00000452950 ZNF358Q9NW07 568 aa9.42□□□□□ -0.9
CSTF1-204ENST00000452950 IQSEC3Q9UPP2 1182 aaPredicted RBP9.42□□□□□ -0.9
CSTF1-204ENST00000452950 TLL2Q9Y6L7 1015 aa9.42□□□□□ -0.9
CSTF1-204ENST00000452950 MYCP01106 439 aaPredicted RBP9.41□□□□□ -0.9
CSTF1-204ENST00000452950 FOXJ1Q92949 421 aa9.41□□□□□ -0.9
CSTF1-204ENST00000452950 TRIM47Q96LD4 638 aa9.41□□□□□ -0.9
CSTF1-204ENST00000452950 POLR3GLQ9BT43 218 aa9.41□□□□□ -0.9
CSTF1-204ENST00000452950 ACBD3Q9H3P7 528 aa9.41□□□□□ -0.9
CSTF1-204ENST00000452950 CWC22Q9HCG8 908 aaKnown RBP9.41□□□□□ -0.9
CSTF1-204ENST00000452950 CAPN5O15484 640 aaPredicted RBP9.4□□□□□ -0.9
CSTF1-204ENST00000452950 PDE3BQ13370 1112 aa9.4□□□□□ -0.9
CSTF1-204ENST00000452950 AGERQ15109 404 aa9.4□□□□□ -0.9
CSTF1-204ENST00000452950 CCDC144BQ3MJ40 725 aa9.4□□□□□ -0.9
CSTF1-204ENST00000452950 C16orf46Q6P387 395 aa9.4□□□□□ -0.9
CSTF1-204ENST00000452950 ZNF662Q6ZS27 426 aa9.4□□□□□ -0.9
CSTF1-204ENST00000452950 BPHLQ86WA6 291 aaPredicted RBP9.4□□□□□ -0.9
CSTF1-204ENST00000452950 SEPT12Q8IYM1 358 aa9.4□□□□□ -0.9
CSTF1-204ENST00000452950 MPNDQ8N594 471 aa9.4□□□□□ -0.9
CSTF1-204ENST00000452950 SCG3Q8WXD2 468 aaKnown RBP9.4□□□□□ -0.9
CSTF1-204ENST00000452950 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.4□□□□□ -0.9
CSTF1-204ENST00000452950 RNF19AQ9NV58 838 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms