RNA–Protein interactions for RNA: ENST00000449704.5

TOP3B-211, Transcript of DNA topoisomerase III beta, humanhuman

TSL 3

Gene TOP3B, Length 543 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-211ENST00000449704 RFC4P35249 363 aa20.55■□□□□ 0.88
TOP3B-211ENST00000449704 EIF4A1P60842 406 aaKnown RBP20.55■□□□□ 0.88
TOP3B-211ENST00000449704 USP16Q9Y5T5 823 aa20.55■□□□□ 0.88
TOP3B-211ENST00000449704 DLG5Q8TDM6 1919 aa20.55■□□□□ 0.88
TOP3B-211ENST00000449704 SIPA1L3O60292 1781 aaPredicted RBP20.54■□□□□ 0.88
TOP3B-211ENST00000449704 BABAM1Q9NWV8 329 aa20.54■□□□□ 0.88
TOP3B-211ENST00000449704 A1BGP04217 495 aa20.53■□□□□ 0.88
TOP3B-211ENST00000449704 SGIP1Q9BQI5 828 aa20.53■□□□□ 0.88
TOP3B-211ENST00000449704 ZNF330Q9Y3S2 320 aaPredicted RBP20.53■□□□□ 0.88
TOP3B-211ENST00000449704 SOS1Q07889 1333 aaPredicted RBP20.53■□□□□ 0.88
TOP3B-211ENST00000449704 CCER2I3L3R5 266 aa20.52■□□□□ 0.88
TOP3B-211ENST00000449704 ARXQ96QS3 562 aa20.52■□□□□ 0.88
TOP3B-211ENST00000449704 SALL2Q9Y467 1007 aaPredicted RBP20.52■□□□□ 0.88
TOP3B-211ENST00000449704 TUBGCP6Q96RT7 1819 aa20.52■□□□□ 0.88
TOP3B-211ENST00000449704 TJP1Q07157 1748 aa20.52■□□□□ 0.88
TOP3B-211ENST00000449704 CHL1O00533 1208 aa20.51■□□□□ 0.87
TOP3B-211ENST00000449704 GIGYF1O75420 1035 aaPredicted RBP20.51■□□□□ 0.87
TOP3B-211ENST00000449704 CALD1Q05682 793 aaKnown RBP20.51■□□□□ 0.87
TOP3B-211ENST00000449704 SRP68Q9UHB9 627 aaKnown RBP20.51■□□□□ 0.87
TOP3B-211ENST00000449704 UBR2Q8IWV8 1755 aa20.5■□□□□ 0.87
TOP3B-211ENST00000449704 NPM2Q86SE8 214 aaKnown RBP20.5■□□□□ 0.87
TOP3B-211ENST00000449704 COL5A3P25940 1745 aaPredicted RBP20.5■□□□□ 0.87
TOP3B-211ENST00000449704 QSER1Q2KHR3 1735 aa20.5■□□□□ 0.87
TOP3B-211ENST00000449704 ZPR1O75312 459 aa20.49■□□□□ 0.87
TOP3B-211ENST00000449704 PIP4K2AP48426 406 aaPredicted RBP20.49■□□□□ 0.87
TOP3B-211ENST00000449704 MIER1Q8N108 512 aa20.49■□□□□ 0.87
TOP3B-211ENST00000449704 CFAP44Q96MT7 982 aa20.49■□□□□ 0.87
TOP3B-211ENST00000449704 UBR3Q6ZT12 1888 aa20.49■□□□□ 0.87
TOP3B-211ENST00000449704 MYH14Q7Z406 1995 aaKnown RBP20.48■□□□□ 0.87
TOP3B-211ENST00000449704 GYS1P13807 737 aa20.48■□□□□ 0.87
TOP3B-211ENST00000449704 EIF5P55010 431 aaKnown RBP20.48■□□□□ 0.87
TOP3B-211ENST00000449704 CICQ96RK0 1608 aaPredicted RBP20.48■□□□□ 0.87
TOP3B-211ENST00000449704 COL15A1P39059 1388 aa20.47■□□□□ 0.87
TOP3B-211ENST00000449704 A0A087WZG4 1122 aa20.47■□□□□ 0.87
TOP3B-211ENST00000449704 CCDC27Q2M243 656 aa20.47■□□□□ 0.87
TOP3B-211ENST00000449704 USPL1Q5W0Q7 1092 aa20.47■□□□□ 0.87
TOP3B-211ENST00000449704 WWC1Q8IX03 1113 aa20.47■□□□□ 0.87
TOP3B-211ENST00000449704 KLHL34Q8N239 644 aa20.47■□□□□ 0.87
TOP3B-211ENST00000449704 NLGN1Q8N2Q7 840 aa20.47■□□□□ 0.87
TOP3B-211ENST00000449704 USP42Q9H9J4 1324 aaKnown RBP20.47■□□□□ 0.87
TOP3B-211ENST00000449704 IL6STP40189 918 aaPredicted RBP20.46■□□□□ 0.87
TOP3B-211ENST00000449704 GNAI1P63096 354 aa20.46■□□□□ 0.87
TOP3B-211ENST00000449704 MBIPQ9NS73 344 aa20.46■□□□□ 0.87
TOP3B-211ENST00000449704 IFT57Q9NWB7 429 aa20.46■□□□□ 0.87
TOP3B-211ENST00000449704 MMP10P09238 476 aa20.45■□□□□ 0.86
TOP3B-211ENST00000449704 ZNF853P0CG23 659 aa20.45■□□□□ 0.86
TOP3B-211ENST00000449704 EIF2S2P20042 333 aaKnown RBP20.45■□□□□ 0.86
TOP3B-211ENST00000449704 KRT24Q2M2I5 525 aa20.45■□□□□ 0.86
TOP3B-211ENST00000449704 FHDC1Q9C0D6 1143 aaPredicted RBP20.45■□□□□ 0.86
TOP3B-211ENST00000449704 NARFQ9UHQ1 456 aa20.45■□□□□ 0.86
TOP3B-211ENST00000449704 TBC1D2BQ9UPU7 963 aa20.45■□□□□ 0.86
TOP3B-211ENST00000449704 NBPF26B4DH59 902 aa20.44■□□□□ 0.86
TOP3B-211ENST00000449704 FKBP8Q14318 412 aa20.44■□□□□ 0.86
TOP3B-211ENST00000449704 NCBP3Q53F19 620 aaKnown RBP20.44■□□□□ 0.86
TOP3B-211ENST00000449704 NBPF10Q6P3W6 841 aaKnown RBP20.44■□□□□ 0.86
TOP3B-211ENST00000449704 NBPF15Q8N660 670 aa20.44■□□□□ 0.86
TOP3B-211ENST00000449704 NGEFQ8N5V2 710 aa20.42■□□□□ 0.86
TOP3B-211ENST00000449704 NECTIN2Q92692 538 aa20.42■□□□□ 0.86
TOP3B-211ENST00000449704 KDM3BQ7LBC6 1761 aa20.41■□□□□ 0.86
TOP3B-211ENST00000449704 DZIP3Q86Y13 1208 aaKnown RBP20.41■□□□□ 0.86
TOP3B-211ENST00000449704 SYT17Q9BSW7 474 aa20.41■□□□□ 0.86
TOP3B-211ENST00000449704 PARP3Q9Y6F1 533 aa20.41■□□□□ 0.86
TOP3B-211ENST00000449704 MYL6BP14649 208 aa20.4■□□□□ 0.86
TOP3B-211ENST00000449704 DUSP27Q5VZP5 1158 aa20.39■□□□□ 0.85
TOP3B-211ENST00000449704 WDR63Q8IWG1 891 aa20.39■□□□□ 0.85
TOP3B-211ENST00000449704 TSR2Q969E8 191 aaKnown RBP20.39■□□□□ 0.85
TOP3B-211ENST00000449704 BCL2L12Q9HB09 334 aa20.39■□□□□ 0.85
TOP3B-211ENST00000449704 IL16Q14005 1332 aa20.38■□□□□ 0.85
TOP3B-211ENST00000449704 ELL2O00472 640 aaPredicted RBP20.38■□□□□ 0.85
TOP3B-211ENST00000449704 ERBB4Q15303 1308 aa20.37■□□□□ 0.85
TOP3B-211ENST00000449704 CAMTA2O94983 1202 aa20.37■□□□□ 0.85
TOP3B-211ENST00000449704 HDGFL1Q5TGJ6 251 aa20.37■□□□□ 0.85
TOP3B-211ENST00000449704 BICDL1Q6ZP65 573 aa20.37■□□□□ 0.85
TOP3B-211ENST00000449704 ANXA1P04083 346 aa20.36■□□□□ 0.85
TOP3B-211ENST00000449704 HOXB7P09629 217 aa20.36■□□□□ 0.85
TOP3B-211ENST00000449704 TM4SF1P30408 202 aa20.36■□□□□ 0.85
TOP3B-211ENST00000449704 DDR1Q08345 913 aa20.36■□□□□ 0.85
TOP3B-211ENST00000449704 NFIXQ14938 502 aa20.36■□□□□ 0.85
TOP3B-211ENST00000449704 PROSER3Q2NL68 480 aa20.35■□□□□ 0.85
TOP3B-211ENST00000449704 C8orf58Q8NAV2 365 aa20.35■□□□□ 0.85
TOP3B-211ENST00000449704 CD2APQ9Y5K6 639 aa20.35■□□□□ 0.85
TOP3B-211ENST00000449704 POLRMTO00411 1230 aaKnown RBP20.34■□□□□ 0.85
TOP3B-211ENST00000449704 PDIA6Q15084 440 aa20.34■□□□□ 0.85
TOP3B-211ENST00000449704 TBC1D9BQ66K14 1250 aa20.34■□□□□ 0.85
TOP3B-211ENST00000449704 NLGN2Q8NFZ4 835 aa20.34■□□□□ 0.85
TOP3B-211ENST00000449704 C4AP0C0L4 1744 aa20.33■□□□□ 0.85
TOP3B-211ENST00000449704 YY1P25490 414 aa20.33■□□□□ 0.85
TOP3B-211ENST00000449704 KIF6Q6ZMV9 814 aa20.33■□□□□ 0.85
TOP3B-211ENST00000449704 TTLL7Q6ZT98 887 aa20.33■□□□□ 0.85
TOP3B-211ENST00000449704 CHPF2Q9P2E5 772 aa20.33■□□□□ 0.85
TOP3B-211ENST00000449704 ZNF652Q9Y2D9 606 aa20.33■□□□□ 0.85
TOP3B-211ENST00000449704 COL24A1Q17RW2 1714 aa20.33■□□□□ 0.84
TOP3B-211ENST00000449704 TSPYL6Q8N831 410 aa20.32■□□□□ 0.84
TOP3B-211ENST00000449704 DDX21Q9NR30 783 aaKnown RBP eCLIP20.32■□□□□ 0.84
TOP3B-211ENST00000449704 SERPINB2P05120 415 aa20.31■□□□□ 0.84
TOP3B-211ENST00000449704 AIMP1Q12904 312 aaKnown RBP20.31■□□□□ 0.84
TOP3B-211ENST00000449704 CLEC4GQ6UXB4 293 aa20.31■□□□□ 0.84
TOP3B-211ENST00000449704 SETDB2Q96T68 719 aa20.31■□□□□ 0.84
TOP3B-211ENST00000449704 ZBTB3Q9H5J0 574 aa20.31■□□□□ 0.84
TOP3B-211ENST00000449704 SPINK5Q9NQ38 1064 aaPredicted RBP20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms