RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 RGS22Q8NE09 1264 aa16.3■□□□□ 0.2
SYNGAP1-204ENST00000449372 PIBF1Q8WXW3 757 aa16.3■□□□□ 0.2
SYNGAP1-204ENST00000449372 OGFRQ9NZT2 677 aa16.3■□□□□ 0.2
SYNGAP1-204ENST00000449372 RBM27Q9P2N5 1060 aaKnown RBP16.3■□□□□ 0.2
SYNGAP1-204ENST00000449372 KIF1AQ12756 1690 aa16.3■□□□□ 0.2
SYNGAP1-204ENST00000449372 CDC45O75419 566 aa16.3■□□□□ 0.2
SYNGAP1-204ENST00000449372 CHRM1P11229 460 aaPredicted RBP16.3■□□□□ 0.2
SYNGAP1-204ENST00000449372 MTHFSDQ2M296 383 aaKnown RBP16.3■□□□□ 0.2
SYNGAP1-204ENST00000449372 LRSAM1Q6UWE0 723 aa16.3■□□□□ 0.2
SYNGAP1-204ENST00000449372 TIGD1Q96MW7 591 aa16.3■□□□□ 0.2
SYNGAP1-204ENST00000449372 GABPB1Q06547 395 aaPredicted RBP16.29■□□□□ 0.2
SYNGAP1-204ENST00000449372 TWISTNBQ3B726 338 aaPredicted RBP16.29■□□□□ 0.2
SYNGAP1-204ENST00000449372 GAS2L2Q8NHY3 880 aa16.29■□□□□ 0.2
SYNGAP1-204ENST00000449372 ALS2Q96Q42 1657 aa16.29■□□□□ 0.2
SYNGAP1-204ENST00000449372 RABEP1Q15276 862 aa16.28■□□□□ 0.2
SYNGAP1-204ENST00000449372 SYCE3A1L190 88 aa16.28■□□□□ 0.2
SYNGAP1-204ENST00000449372 SOX12O15370 315 aa16.28■□□□□ 0.2
SYNGAP1-204ENST00000449372 ANKRD45Q5TZF3 282 aa16.28■□□□□ 0.2
SYNGAP1-204ENST00000449372 NCAPD2Q15021 1401 aa16.28■□□□□ 0.2
SYNGAP1-204ENST00000449372 MCM10Q7L590 875 aa16.28■□□□□ 0.2
SYNGAP1-204ENST00000449372 MPNDQ8N594 471 aa16.28■□□□□ 0.2
SYNGAP1-204ENST00000449372 ABTB2Q8N961 1025 aa16.28■□□□□ 0.2
SYNGAP1-204ENST00000449372 ZBTB7BO15156 539 aaPredicted RBP16.27■□□□□ 0.2
SYNGAP1-204ENST00000449372 FOXO3O43524 673 aa16.27■□□□□ 0.2
SYNGAP1-204ENST00000449372 LNPKQ9C0E8 428 aa16.27■□□□□ 0.2
SYNGAP1-204ENST00000449372 MED1Q15648 1581 aaPredicted RBP16.27■□□□□ 0.2
SYNGAP1-204ENST00000449372 PRPF40AO75400 957 aaKnown RBP16.26■□□□□ 0.19
SYNGAP1-204ENST00000449372 CWC22Q9HCG8 908 aaKnown RBP16.26■□□□□ 0.19
SYNGAP1-204ENST00000449372 AMPHP49418 695 aa16.26■□□□□ 0.19
SYNGAP1-204ENST00000449372 ANKRD7Q92527 254 aa16.26■□□□□ 0.19
SYNGAP1-204ENST00000449372 MSH6P52701 1360 aa16.26■□□□□ 0.19
SYNGAP1-204ENST00000449372 ST18O60284 1047 aa16.26■□□□□ 0.19
SYNGAP1-204ENST00000449372 SLFN14P0C7P3 912 aa16.26■□□□□ 0.19
SYNGAP1-204ENST00000449372 FAM208AQ9UK61 1670 aaKnown RBP16.26■□□□□ 0.19
SYNGAP1-204ENST00000449372 NUTM2GQ5VZR2 741 aa16.26■□□□□ 0.19
SYNGAP1-204ENST00000449372 C17orf53Q8N3J3 647 aaPredicted RBP16.25■□□□□ 0.19
SYNGAP1-204ENST00000449372 LMO7Q8WWI1 1683 aa16.25■□□□□ 0.19
SYNGAP1-204ENST00000449372 GPT2Q8TD30 523 aa16.25■□□□□ 0.19
SYNGAP1-204ENST00000449372 N4BP2Q86UW6 1770 aaPredicted RBP16.24■□□□□ 0.19
SYNGAP1-204ENST00000449372 TRIM6-TRIM34B2RNG4 842 aa16.24■□□□□ 0.19
SYNGAP1-204ENST00000449372 FKBP5Q13451 457 aaPredicted RBP16.24■□□□□ 0.19
SYNGAP1-204ENST00000449372 KIF2CQ99661 725 aa16.24■□□□□ 0.19
SYNGAP1-204ENST00000449372 TRIM34Q9BYJ4 488 aa16.24■□□□□ 0.19
SYNGAP1-204ENST00000449372 HTATSF1O43719 755 aaKnown RBP16.24■□□□□ 0.19
SYNGAP1-204ENST00000449372 CHAF1AQ13111 956 aaPredicted RBP16.24■□□□□ 0.19
SYNGAP1-204ENST00000449372 KRT24Q2M2I5 525 aa16.24■□□□□ 0.19
SYNGAP1-204ENST00000449372 DIAPH3Q9NSV4 1193 aa16.24■□□□□ 0.19
SYNGAP1-204ENST00000449372 C1orf167Q5SNV9 1468 aa16.24■□□□□ 0.19
SYNGAP1-204ENST00000449372 RBM42Q9BTD8 480 aaKnown RBP16.24■□□□□ 0.19
SYNGAP1-204ENST00000449372 CRYBG1Q9Y4K1 1723 aa16.23■□□□□ 0.19
SYNGAP1-204ENST00000449372 ELL2O00472 640 aaPredicted RBP16.23■□□□□ 0.19
SYNGAP1-204ENST00000449372 IP6K1Q92551 441 aa16.23■□□□□ 0.19
SYNGAP1-204ENST00000449372 TMEM63CQ9P1W3 806 aa16.23■□□□□ 0.19
SYNGAP1-204ENST00000449372 XIRP1Q702N8 1843 aaKnown RBP16.23■□□□□ 0.19
SYNGAP1-204ENST00000449372 INTS3Q68E01 1043 aaKnown RBP16.23■□□□□ 0.19
SYNGAP1-204ENST00000449372 RIOK3O14730 519 aaKnown RBP16.22■□□□□ 0.19
SYNGAP1-204ENST00000449372 ORAI2Q96SN7 254 aa16.22■□□□□ 0.19
SYNGAP1-204ENST00000449372 ESCO1Q5FWF5 840 aa16.22■□□□□ 0.19
SYNGAP1-204ENST00000449372 KDM3BQ7LBC6 1761 aa16.22■□□□□ 0.19
SYNGAP1-204ENST00000449372 REC8O95072 547 aa16.22■□□□□ 0.19
SYNGAP1-204ENST00000449372 CAPN2P17655 700 aa16.21■□□□□ 0.19
SYNGAP1-204ENST00000449372 TTC12Q9H892 705 aaPredicted RBP16.21■□□□□ 0.19
SYNGAP1-204ENST00000449372 SYAP1Q96A49 352 aaPredicted RBP16.21■□□□□ 0.18
SYNGAP1-204ENST00000449372 CALCOCO1Q9P1Z2 691 aa16.21■□□□□ 0.18
SYNGAP1-204ENST00000449372 AK9Q5TCS8 1911 aa16.2■□□□□ 0.18
SYNGAP1-204ENST00000449372 HMMRO75330 724 aa16.2■□□□□ 0.18
SYNGAP1-204ENST00000449372 MCCP23508 829 aa16.2■□□□□ 0.18
SYNGAP1-204ENST00000449372 RGPD5Q99666 1765 aa16.2■□□□□ 0.18
SYNGAP1-204ENST00000449372 CACNA1FO60840 1977 aa16.2■□□□□ 0.18
SYNGAP1-204ENST00000449372 SPTLC3Q9NUV7 552 aa16.2■□□□□ 0.18
SYNGAP1-204ENST00000449372 ADAMTS7Q9UKP4 1686 aa16.2■□□□□ 0.18
SYNGAP1-204ENST00000449372 SIRT2Q8IXJ6 389 aa16.2■□□□□ 0.18
SYNGAP1-204ENST00000449372 TULP2O00295 520 aa16.19■□□□□ 0.18
SYNGAP1-204ENST00000449372 TERF2Q15554 542 aa16.19■□□□□ 0.18
SYNGAP1-204ENST00000449372 DCCP43146 1447 aa16.19■□□□□ 0.18
SYNGAP1-204ENST00000449372 CEMIPQ8WUJ3 1361 aa16.19■□□□□ 0.18
SYNGAP1-204ENST00000449372 COL18A1P39060 1754 aa16.18■□□□□ 0.18
SYNGAP1-204ENST00000449372 MAP3K5Q99683 1374 aa16.18■□□□□ 0.18
SYNGAP1-204ENST00000449372 MCM2P49736 904 aa16.18■□□□□ 0.18
SYNGAP1-204ENST00000449372 PSME1Q06323 249 aa16.18■□□□□ 0.18
SYNGAP1-204ENST00000449372 TSPY26PQ9H489 355 aa16.18■□□□□ 0.18
SYNGAP1-204ENST00000449372 ERICH4A6NGS2 130 aa16.18■□□□□ 0.18
SYNGAP1-204ENST00000449372 KCNH5Q8NCM2 988 aa16.18■□□□□ 0.18
SYNGAP1-204ENST00000449372 IL17REQ8NFR9 667 aa16.18■□□□□ 0.18
SYNGAP1-204ENST00000449372 SIPA1L3O60292 1781 aaPredicted RBP16.17■□□□□ 0.18
SYNGAP1-204ENST00000449372 CTIFO43310 598 aaKnown RBP16.17■□□□□ 0.18
SYNGAP1-204ENST00000449372 CTNNA3Q9UI47 895 aa16.17■□□□□ 0.18
SYNGAP1-204ENST00000449372 LMTK3Q96Q04 1460 aa16.17■□□□□ 0.18
SYNGAP1-204ENST00000449372 PKP1Q13835 747 aa16.17■□□□□ 0.18
SYNGAP1-204ENST00000449372 TSPYL1Q9H0U9 437 aa16.17■□□□□ 0.18
SYNGAP1-204ENST00000449372 NBPF6Q5VWK0 638 aa16.17■□□□□ 0.18
SYNGAP1-204ENST00000449372 ARHGEF25Q86VW2 580 aa16.17■□□□□ 0.18
SYNGAP1-204ENST00000449372 NBPF4Q96M43 638 aa16.17■□□□□ 0.18
SYNGAP1-204ENST00000449372 ATP10DQ9P241 1426 aa16.17■□□□□ 0.18
SYNGAP1-204ENST00000449372 GNAT3A8MTJ3 354 aa16.16■□□□□ 0.18
SYNGAP1-204ENST00000449372 ZBTB9Q96C00 473 aa16.16■□□□□ 0.18
SYNGAP1-204ENST00000449372 MIS18AQ9NYP9 233 aa16.16■□□□□ 0.18
SYNGAP1-204ENST00000449372 DDX41Q9UJV9 622 aaKnown RBP16.16■□□□□ 0.18
SYNGAP1-204ENST00000449372 NSFL1CQ9UNZ2 370 aaKnown RBP16.16■□□□□ 0.18
SYNGAP1-204ENST00000449372 PHF14O94880 888 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms