RNA–Protein interactions for RNA: ENST00000448549.1

TRA2A-203, Transcript of transformer 2 alpha homolog, humanhuman

TSL 4

Gene TRA2A, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-203ENST00000448549 CANXP27824 592 aaKnown RBP20.94■□□□□ 0.94
TRA2A-203ENST00000448549 COL15A1P39059 1388 aa20.94■□□□□ 0.94
TRA2A-203ENST00000448549 NPC1L1Q9UHC9 1359 aa20.94■□□□□ 0.94
TRA2A-203ENST00000448549 TTC5Q8N0Z6 440 aa20.93■□□□□ 0.94
TRA2A-203ENST00000448549 IL17REQ8NFR9 667 aa20.93■□□□□ 0.94
TRA2A-203ENST00000448549 BCL2L12Q9HB09 334 aa20.93■□□□□ 0.94
TRA2A-203ENST00000448549 CEP350Q5VT06 3117 aa20.93■□□□□ 0.94
TRA2A-203ENST00000448549 NMRK2Q9NPI5 230 aa20.92■□□□□ 0.94
TRA2A-203ENST00000448549 COL3A1P02461 1466 aaPredicted RBP20.92■□□□□ 0.94
TRA2A-203ENST00000448549 ADAMTS7Q9UKP4 1686 aa20.92■□□□□ 0.94
TRA2A-203ENST00000448549 GNAT3A8MTJ3 354 aa20.91■□□□□ 0.94
TRA2A-203ENST00000448549 STARD3NLO95772 234 aa20.91■□□□□ 0.94
TRA2A-203ENST00000448549 TEFQ10587 303 aa20.91■□□□□ 0.94
TRA2A-203ENST00000448549 GAS2L2Q8NHY3 880 aa20.91■□□□□ 0.94
TRA2A-203ENST00000448549 TOMM70O94826 608 aa20.9■□□□□ 0.94
TRA2A-203ENST00000448549 SERPINB2P05120 415 aa20.9■□□□□ 0.94
TRA2A-203ENST00000448549 ZNF496Q96IT1 587 aaPredicted RBP20.9■□□□□ 0.94
TRA2A-203ENST00000448549 ZNF790Q6PG37 636 aa20.89■□□□□ 0.93
TRA2A-203ENST00000448549 RNF181Q9P0P0 153 aa20.89■□□□□ 0.93
TRA2A-203ENST00000448549 EIF5P55010 431 aaKnown RBP20.88■□□□□ 0.93
TRA2A-203ENST00000448549 BICDL1Q6ZP65 573 aa20.87■□□□□ 0.93
TRA2A-203ENST00000448549 PHACTR3Q96KR7 559 aa20.87■□□□□ 0.93
TRA2A-203ENST00000448549 HEG1Q9ULI3 1381 aa20.86■□□□□ 0.93
TRA2A-203ENST00000448549 A0A087WZG4 1122 aa20.86■□□□□ 0.93
TRA2A-203ENST00000448549 BRCA1P38398 1863 aaKnown RBP20.86■□□□□ 0.93
TRA2A-203ENST00000448549 PRKAR2BP31323 418 aa20.85■□□□□ 0.93
TRA2A-203ENST00000448549 CFAP53Q96M91 514 aa20.85■□□□□ 0.93
TRA2A-203ENST00000448549 TEX13AQ9BXU3 409 aaPredicted RBP20.85■□□□□ 0.93
TRA2A-203ENST00000448549 ZNF330Q9Y3S2 320 aaPredicted RBP20.85■□□□□ 0.93
TRA2A-203ENST00000448549 APLP1P51693 650 aa20.84■□□□□ 0.93
TRA2A-203ENST00000448549 C2CD5Q86YS7 1000 aa20.84■□□□□ 0.93
TRA2A-203ENST00000448549 RSPH6AQ9H0K4 717 aa20.84■□□□□ 0.93
TRA2A-203ENST00000448549 TBC1D2BQ9UPU7 963 aa20.84■□□□□ 0.93
TRA2A-203ENST00000448549 KDM2BQ8NHM5 1336 aa20.83■□□□□ 0.93
TRA2A-203ENST00000448549 KCNQ3O43525 872 aa20.83■□□□□ 0.93
TRA2A-203ENST00000448549 RASSF7Q02833 373 aa20.83■□□□□ 0.93
TRA2A-203ENST00000448549 TBC1D9BQ66K14 1250 aa20.83■□□□□ 0.93
TRA2A-203ENST00000448549 TTLL6Q8N841 843 aa20.83■□□□□ 0.93
TRA2A-203ENST00000448549 FMNL2Q96PY5 1086 aa20.83■□□□□ 0.93
TRA2A-203ENST00000448549 CARMIL3Q8ND23 1372 aa20.83■□□□□ 0.92
TRA2A-203ENST00000448549 BTBD11A6QL63 1104 aa20.82■□□□□ 0.92
TRA2A-203ENST00000448549 H0YIN7 160 aa20.82■□□□□ 0.92
TRA2A-203ENST00000448549 A1BGP04217 495 aa20.82■□□□□ 0.92
TRA2A-203ENST00000448549 C16orf71Q8IYS4 520 aaPredicted RBP20.82■□□□□ 0.92
TRA2A-203ENST00000448549 CEMIPQ8WUJ3 1361 aa20.82■□□□□ 0.92
TRA2A-203ENST00000448549 ARFGEF1Q9Y6D6 1849 aa20.81■□□□□ 0.92
TRA2A-203ENST00000448549 IL6STP40189 918 aaPredicted RBP20.81■□□□□ 0.92
TRA2A-203ENST00000448549 RBM46Q8TBY0 533 aaKnown RBP20.81■□□□□ 0.92
TRA2A-203ENST00000448549 RRAGCQ9HB90 399 aa20.81■□□□□ 0.92
TRA2A-203ENST00000448549 NUDCQ9Y266 331 aa20.81■□□□□ 0.92
TRA2A-203ENST00000448549 UBR2Q8IWV8 1755 aa20.8■□□□□ 0.92
TRA2A-203ENST00000448549 U2AF1L5P0DN76 240 aaPredicted RBP20.79■□□□□ 0.92
TRA2A-203ENST00000448549 PPP2R1AP30153 589 aa20.79■□□□□ 0.92
TRA2A-203ENST00000448549 PRELPP51888 382 aa20.79■□□□□ 0.92
TRA2A-203ENST00000448549 U2AF1Q01081 240 aaKnown RBP eCLIP20.79■□□□□ 0.921e-7■■■□□ 15.2
TRA2A-203ENST00000448549 CCDC24Q8N4L8 307 aa20.79■□□□□ 0.92
TRA2A-203ENST00000448549 LMNB1P20700 586 aa20.78■□□□□ 0.92
TRA2A-203ENST00000448549 IFFO2Q5TF58 517 aa20.78■□□□□ 0.92
TRA2A-203ENST00000448549 NPM2Q86SE8 214 aaKnown RBP20.78■□□□□ 0.92
TRA2A-203ENST00000448549 NRXN2Q9P2S2 1712 aa20.78■□□□□ 0.92
TRA2A-203ENST00000448549 PRR5LQ6MZQ0 368 aa20.77■□□□□ 0.92
TRA2A-203ENST00000448549 DNAJC5GQ8N7S2 189 aa20.77■□□□□ 0.92
TRA2A-203ENST00000448549 BRIP1Q9BX63 1249 aa20.77■□□□□ 0.92
TRA2A-203ENST00000448549 USP16Q9Y5T5 823 aa20.77■□□□□ 0.92
TRA2A-203ENST00000448549 CAMTA2O94983 1202 aa20.76■□□□□ 0.91
TRA2A-203ENST00000448549 PDE6BP35913 854 aa20.76■□□□□ 0.91
TRA2A-203ENST00000448549 PIP4K2AP48426 406 aaPredicted RBP20.76■□□□□ 0.91
TRA2A-203ENST00000448549 MCM10Q7L590 875 aa20.76■□□□□ 0.91
TRA2A-203ENST00000448549 RTF1Q92541 710 aaKnown RBP20.76■□□□□ 0.91
TRA2A-203ENST00000448549 ZNF622Q969S3 477 aaKnown RBP eCLIP20.76■□□□□ 0.915e-11■■■□□ 15
TRA2A-203ENST00000448549 VIRMAQ69YN4 1812 aaKnown RBP20.76■□□□□ 0.91
TRA2A-203ENST00000448549 PRAMEF22A3QJZ6 481 aa20.75■□□□□ 0.91
TRA2A-203ENST00000448549 NFKBIEO00221 500 aa20.75■□□□□ 0.91
TRA2A-203ENST00000448549 FSTL1Q12841 308 aa20.75■□□□□ 0.91
TRA2A-203ENST00000448549 SETDB2Q96T68 719 aa20.75■□□□□ 0.91
TRA2A-203ENST00000448549 AFDNP55196 1824 aaKnown RBP20.75■□□□□ 0.91
TRA2A-203ENST00000448549 ZC3H4Q9UPT8 1303 aaKnown RBP20.75■□□□□ 0.91
TRA2A-203ENST00000448549 DCTN1Q14203 1278 aa20.74■□□□□ 0.91
TRA2A-203ENST00000448549 DZIP3Q86Y13 1208 aaKnown RBP20.74■□□□□ 0.91
TRA2A-203ENST00000448549 ZNF219Q9P2Y4 722 aaPredicted RBP20.74■□□□□ 0.91
TRA2A-203ENST00000448549 C21orf2O43822 256 aa20.73■□□□□ 0.91
TRA2A-203ENST00000448549 HTRA3P83110 453 aa20.73■□□□□ 0.91
TRA2A-203ENST00000448549 CNBD1Q8NA66 436 aa20.73■□□□□ 0.91
TRA2A-203ENST00000448549 PDZRN3Q9UPQ7 1066 aa20.73■□□□□ 0.91
TRA2A-203ENST00000448549 GLTPD2A6NH11 291 aa20.72■□□□□ 0.91
TRA2A-203ENST00000448549 NPHP1O15259 732 aa20.72■□□□□ 0.91
TRA2A-203ENST00000448549 SNRPA1P09661 255 aaKnown RBP20.72■□□□□ 0.91
TRA2A-203ENST00000448549 SIPA1L3O60292 1781 aaPredicted RBP20.72■□□□□ 0.91
TRA2A-203ENST00000448549 SMC1BQ8NDV3 1235 aa20.7■□□□□ 0.9
TRA2A-203ENST00000448549 HTATSF1O43719 755 aaKnown RBP20.69■□□□□ 0.9
TRA2A-203ENST00000448549 VEGFAP15692 232 aaPredicted RBP20.69■□□□□ 0.9
TRA2A-203ENST00000448549 ST5P78524 1137 aa20.69■□□□□ 0.9
TRA2A-203ENST00000448549 SCN7AQ01118 1682 aa20.69■□□□□ 0.9
TRA2A-203ENST00000448549 DLEC1Q9Y238 1755 aa20.67■□□□□ 0.9
TRA2A-203ENST00000448549 NBPF26B4DH59 902 aa20.67■□□□□ 0.9
TRA2A-203ENST00000448549 SRGNP10124 158 aa20.67■□□□□ 0.9
TRA2A-203ENST00000448549 TAF7Q15545 349 aaPredicted RBP20.67■□□□□ 0.9
TRA2A-203ENST00000448549 STYK1Q6J9G0 422 aa20.67■□□□□ 0.9
TRA2A-203ENST00000448549 NBPF10Q6P3W6 841 aaKnown RBP20.67■□□□□ 0.9
TRA2A-203ENST00000448549 CLEC4GQ6UXB4 293 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms