RNA–Protein interactions for RNA: ENST00000447261.6

BCRP3-201, Transcript of breakpoint cluster region pseudogene 3, humanhuman

TSL 2

Gene BCRP3, Length 1,457 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCRP3-201ENST00000447261 DNAJC10Q8IXB1 793 aa20.88■□□□□ 0.93
BCRP3-201ENST00000447261 RCAN3Q9UKA8 241 aa20.88■□□□□ 0.93
BCRP3-201ENST00000447261 SLFN5Q08AF3 891 aa20.87■□□□□ 0.93
BCRP3-201ENST00000447261 TRMT2AQ8IZ69 625 aaKnown RBP20.87■□□□□ 0.93
BCRP3-201ENST00000447261 GAS2L2Q8NHY3 880 aa20.87■□□□□ 0.93
BCRP3-201ENST00000447261 C4AP0C0L4 1744 aa20.86■□□□□ 0.93
BCRP3-201ENST00000447261 CICQ96RK0 1608 aaPredicted RBP20.86■□□□□ 0.93
BCRP3-201ENST00000447261 E9PSI1 815 aa20.85■□□□□ 0.93
BCRP3-201ENST00000447261 FCHSD2O94868 740 aa20.85■□□□□ 0.93
BCRP3-201ENST00000447261 DUSP27Q5VZP5 1158 aa20.85■□□□□ 0.93
BCRP3-201ENST00000447261 INTS5Q6P9B9 1019 aaKnown RBP20.85■□□□□ 0.93
BCRP3-201ENST00000447261 SRP68Q9UHB9 627 aaKnown RBP20.85■□□□□ 0.93
BCRP3-201ENST00000447261 GNAT3A8MTJ3 354 aa20.84■□□□□ 0.93
BCRP3-201ENST00000447261 PARP3Q9Y6F1 533 aa20.84■□□□□ 0.93
BCRP3-201ENST00000447261 ADAMTS7Q9UKP4 1686 aa20.84■□□□□ 0.93
BCRP3-201ENST00000447261 PRKAR2BP31323 418 aa20.83■□□□□ 0.93
BCRP3-201ENST00000447261 WDR63Q8IWG1 891 aa20.83■□□□□ 0.93
BCRP3-201ENST00000447261 WWC1Q8IX03 1113 aa20.83■□□□□ 0.93
BCRP3-201ENST00000447261 PLEKHF1Q96S99 279 aa20.83■□□□□ 0.93
BCRP3-201ENST00000447261 CCDC87Q9NVE4 849 aa20.83■□□□□ 0.93
BCRP3-201ENST00000447261 TEFQ10587 303 aa20.82■□□□□ 0.92
BCRP3-201ENST00000447261 TTC5Q8N0Z6 440 aa20.82■□□□□ 0.92
BCRP3-201ENST00000447261 KCPQ6ZWJ8 1503 aa20.82■□□□□ 0.92
BCRP3-201ENST00000447261 USP42Q9H9J4 1324 aaKnown RBP20.82■□□□□ 0.92
BCRP3-201ENST00000447261 CYP19A1P11511 503 aaPredicted RBP20.81■□□□□ 0.92
BCRP3-201ENST00000447261 IL17REQ8NFR9 667 aa20.81■□□□□ 0.92
BCRP3-201ENST00000447261 PHACTR3Q96KR7 559 aa20.81■□□□□ 0.92
BCRP3-201ENST00000447261 RSPH6AQ9H0K4 717 aa20.81■□□□□ 0.92
BCRP3-201ENST00000447261 KIF13BQ9NQT8 1826 aa20.8■□□□□ 0.92
BCRP3-201ENST00000447261 ZPR1O75312 459 aa20.8■□□□□ 0.92
BCRP3-201ENST00000447261 MAPK8IP3Q9UPT6 1336 aa20.79■□□□□ 0.92
BCRP3-201ENST00000447261 N4BP2Q86UW6 1770 aaPredicted RBP20.79■□□□□ 0.92
BCRP3-201ENST00000447261 C10orf71Q711Q0 1435 aa20.79■□□□□ 0.92
BCRP3-201ENST00000447261 A0A0G2JLW4 131 aa20.79■□□□□ 0.92
BCRP3-201ENST00000447261 PPP4R2Q9NY27 417 aa20.79■□□□□ 0.92
BCRP3-201ENST00000447261 PXDNLA1KZ92 1463 aa20.79■□□□□ 0.92
BCRP3-201ENST00000447261 SOS1Q07889 1333 aaPredicted RBP20.79■□□□□ 0.92
BCRP3-201ENST00000447261 NEFMP07197 916 aa20.78■□□□□ 0.92
BCRP3-201ENST00000447261 TGFB2P61812 414 aa20.78■□□□□ 0.92
BCRP3-201ENST00000447261 VSIG10Q8N0Z9 540 aa20.78■□□□□ 0.92
BCRP3-201ENST00000447261 ZBTB1Q9Y2K1 713 aa20.78■□□□□ 0.92
BCRP3-201ENST00000447261 UBR2Q8IWV8 1755 aa20.78■□□□□ 0.92
BCRP3-201ENST00000447261 RRP1P56182 461 aaKnown RBP20.77■□□□□ 0.92
BCRP3-201ENST00000447261 USPL1Q5W0Q7 1092 aa20.77■□□□□ 0.92
BCRP3-201ENST00000447261 CANXP27824 592 aaKnown RBP20.76■□□□□ 0.91
BCRP3-201ENST00000447261 ZNF790Q6PG37 636 aa20.76■□□□□ 0.91
BCRP3-201ENST00000447261 COL15A1P39059 1388 aa20.76■□□□□ 0.91
BCRP3-201ENST00000447261 STARD3NLO95772 234 aa20.75■□□□□ 0.91
BCRP3-201ENST00000447261 DPEP1P16444 411 aa20.75■□□□□ 0.91
BCRP3-201ENST00000447261 TMPOP42166 694 aaKnown RBP20.75■□□□□ 0.91
BCRP3-201ENST00000447261 IRX6P78412 446 aaPredicted RBP20.75■□□□□ 0.91
BCRP3-201ENST00000447261 DDR1Q08345 913 aa20.75■□□□□ 0.91
BCRP3-201ENST00000447261 ZNF496Q96IT1 587 aaPredicted RBP20.75■□□□□ 0.91
BCRP3-201ENST00000447261 BCS1LQ9Y276 419 aa20.75■□□□□ 0.91
BCRP3-201ENST00000447261 GIGYF1O75420 1035 aaPredicted RBP20.75■□□□□ 0.91
BCRP3-201ENST00000447261 KIAA1551Q9HCM1 1747 aa20.75■□□□□ 0.91
BCRP3-201ENST00000447261 SIPA1L3O60292 1781 aaPredicted RBP20.74■□□□□ 0.91
BCRP3-201ENST00000447261 RTF1Q92541 710 aaKnown RBP20.74■□□□□ 0.91
BCRP3-201ENST00000447261 ATP10DQ9P241 1426 aa20.74■□□□□ 0.91
BCRP3-201ENST00000447261 BTBD11A6QL63 1104 aa20.73■□□□□ 0.91
BCRP3-201ENST00000447261 NEUROD2Q15784 382 aa20.73■□□□□ 0.91
BCRP3-201ENST00000447261 NARFQ9UHQ1 456 aa20.73■□□□□ 0.91
BCRP3-201ENST00000447261 RRP7AQ9Y3A4 280 aaKnown RBP20.73■□□□□ 0.91
BCRP3-201ENST00000447261 CEMIPQ8WUJ3 1361 aa20.73■□□□□ 0.91
BCRP3-201ENST00000447261 HEG1Q9ULI3 1381 aa20.73■□□□□ 0.91
BCRP3-201ENST00000447261 POLRMTO00411 1230 aaKnown RBP20.72■□□□□ 0.91
BCRP3-201ENST00000447261 C1QTNF8P60827 252 aa20.72■□□□□ 0.91
BCRP3-201ENST00000447261 FMNL2Q96PY5 1086 aa20.72■□□□□ 0.91
BCRP3-201ENST00000447261 SPINK5Q9NQ38 1064 aaPredicted RBP20.72■□□□□ 0.91
BCRP3-201ENST00000447261 IL16Q14005 1332 aa20.71■□□□□ 0.91
BCRP3-201ENST00000447261 TM4SF1P30408 202 aa20.71■□□□□ 0.91
BCRP3-201ENST00000447261 MCM10Q7L590 875 aa20.71■□□□□ 0.91
BCRP3-201ENST00000447261 ZNF330Q9Y3S2 320 aaPredicted RBP20.71■□□□□ 0.91
BCRP3-201ENST00000447261 KCNQ3O43525 872 aa20.7■□□□□ 0.9
BCRP3-201ENST00000447261 ZNF526Q8TF50 670 aaPredicted RBP20.7■□□□□ 0.9
BCRP3-201ENST00000447261 TEX13AQ9BXU3 409 aaPredicted RBP20.7■□□□□ 0.9
BCRP3-201ENST00000447261 MYH16Q9H6N6 1097 aa20.7■□□□□ 0.9
BCRP3-201ENST00000447261 NFIXQ14938 502 aa20.69■□□□□ 0.9
BCRP3-201ENST00000447261 DCTN1Q14203 1278 aa20.69■□□□□ 0.9
BCRP3-201ENST00000447261 ARHGAP27Q6ZUM4 889 aa20.69■□□□□ 0.9
BCRP3-201ENST00000447261 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.69■□□□□ 0.9
BCRP3-201ENST00000447261 A0A087WZG4 1122 aa20.68■□□□□ 0.9
BCRP3-201ENST00000447261 KCNA3P22001 575 aa20.68■□□□□ 0.9
BCRP3-201ENST00000447261 EIF5P55010 431 aaKnown RBP20.68■□□□□ 0.9
BCRP3-201ENST00000447261 RIPK4P57078 832 aa20.68■□□□□ 0.9
BCRP3-201ENST00000447261 BCL2L12Q9HB09 334 aa20.68■□□□□ 0.9
BCRP3-201ENST00000447261 GPBP1L1Q9HC44 474 aaPredicted RBP20.68■□□□□ 0.9
BCRP3-201ENST00000447261 PIM2Q9P1W9 311 aa20.68■□□□□ 0.9
BCRP3-201ENST00000447261 TRIM35Q9UPQ4 493 aa20.68■□□□□ 0.9
BCRP3-201ENST00000447261 BRCA1P38398 1863 aaKnown RBP20.67■□□□□ 0.9
BCRP3-201ENST00000447261 ADCY9O60503 1353 aa20.67■□□□□ 0.9
BCRP3-201ENST00000447261 CHRNA5P30532 468 aa20.67■□□□□ 0.9
BCRP3-201ENST00000447261 BICDL1Q6ZP65 573 aa20.67■□□□□ 0.9
BCRP3-201ENST00000447261 NPM2Q86SE8 214 aaKnown RBP20.67■□□□□ 0.9
BCRP3-201ENST00000447261 AFDNP55196 1824 aaKnown RBP20.66■□□□□ 0.9
BCRP3-201ENST00000447261 A1BGP04217 495 aa20.66■□□□□ 0.9
BCRP3-201ENST00000447261 NFE2L2Q16236 605 aa20.66■□□□□ 0.9
BCRP3-201ENST00000447261 CT47B1P0C2W7 299 aaPredicted RBP20.65■□□□□ 0.9
BCRP3-201ENST00000447261 TBC1D2BQ9UPU7 963 aa20.65■□□□□ 0.9
BCRP3-201ENST00000447261 SERPINB2P05120 415 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms